Gene info for b1577 in Escherichia coli BW25113

Name: ydfE
Annotation: Qin prophage; predicted protein (RefSeq)
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, + strand, nucleotides 1,648,102 to 1,648,866
See nucleotide sequence around b1577 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntydfB and ydfC are separated by 29 nucleotidesydfC and dicF are separated by 340 nucleotidesdicF and dicB are separated by 174 nucleotidesdicB and ydfD overlap by 4 nucleotidesydfD and ydfE are separated by 92 nucleotidesydfE and insD are separated by 2 nucleotidesinsD and intQ are separated by 13 nucleotidesintQ and rspB are separated by 187 nucleotidesrspB and rspA are separated by 11 nucleotidesrspA and ynfA are separated by 205 nucleotides b1572: ydfB - orf, hypothetical protein (VIMSS), at 1,646,689 to 1,646,817 ydfB b1573: ydfC - Qin prophage; predicted protein (RefSeq), at 1,646,847 to 1,647,065 ydfC b1574: dicF - antisense RNA DicF (NCBI), at 1,647,406 to 1,647,458 dicF b1575: dicB - Qin prophage; cell division inhibition protein (NCBI), at 1,647,633 to 1,647,821 dicB b1576: ydfD - Qin prophage; predicted protein (NCBI), at 1,647,818 to 1,648,009 ydfD b1577: ydfE - Qin prophage; predicted protein (RefSeq), at 1,648,102 to 1,648,866 ydfE b1578: insD - Qin prophage; IS2 insertion element transposase InsAB', C-ter fragment (pseudogene) (RefSeq), at 1,648,869 to 1,649,561 insD b1579: intQ - Qin prophage; predicted defective integrase (RefSeq), at 1,649,575 to 1,650,732 intQ b1580: rspB - predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI), at 1,650,920 to 1,651,939 rspB b1581: rspA - predicted dehydratase (NCBI), at 1,651,951 to 1,653,165 rspA b1582: ynfA - hypothetical protein (NCBI), at 1,653,371 to 1,653,697 ynfA
Locus Name Description Strand Phenotype
b1572 ydfB orf, hypothetical protein (VIMSS) + sig.
b1573 ydfC Qin prophage; predicted protein (RefSeq) + insig.
b1574 dicF antisense RNA DicF (NCBI) + no data
b1575 dicB Qin prophage; cell division inhibition protein (NCBI) + sig.
b1576 ydfD Qin prophage; predicted protein (NCBI) + cofit
b1577 ydfE Qin prophage; predicted protein (RefSeq) + insig.
b1578 insD Qin prophage; IS2 insertion element transposase InsAB', C-ter fragment (pseudogene) (RefSeq) + no data
b1579 intQ Qin prophage; predicted defective integrase (RefSeq) + strong
b1580 rspB predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) - sig.
b1581 rspA predicted dehydratase (NCBI) - insig.
b1582 ynfA hypothetical protein (NCBI) - sig.

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