Gene info for b1560 in Escherichia coli BW25113

Name: ydfU
Annotation: Qin prophage; predicted protein (RefSeq)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 1,641,279 to 1,642,328
See nucleotide sequence around b1560 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646313499, uniprot: P76162

Nearby Genes

500 ntydfR and b1556 are separated by 4 nucleotidesb1556 and cspB are separated by 753 nucleotidescspB and cspF are separated by 300 nucleotidescspF and b1559 are separated by 421 nucleotidesb1559 and ydfU are separated by 13 nucleotidesydfU and rem are separated by 346 nucleotidesrem and hokD are separated by 216 nucleotideshokD and relE are separated by 71 nucleotidesrelE and relB overlap by 1 nucleotidesrelB and ydfV are separated by 24 nucleotides b1555: ydfR - Qin prophage; predicted protein (NCBI), at 1,638,078 to 1,638,389 ydfR b1556: b1556 - orf, hypothetical protein (VIMSS), at 1,638,394 to 1,638,609 b1556 b1557: cspB - Qin prophage; cold shock protein (NCBI), at 1,639,363 to 1,639,578 cspB b1558: cspF - Qin prophage; cold shock protein (NCBI), at 1,639,879 to 1,640,091 cspF b1559: b1559 - orf, hypothetical protein (VIMSS), at 1,640,513 to 1,641,265 b1559 b1560: ydfU - Qin prophage; predicted protein (RefSeq), at 1,641,279 to 1,642,328 ydfU b1561: rem - Qin prophage; predicted protein (NCBI), at 1,642,675 to 1,642,926 rem b1562: hokD - Qin prophage; small toxic polypeptide (NCBI), at 1,643,143 to 1,643,298 hokD b1563: relE - Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI), at 1,643,370 to 1,643,657 relE b1564: relB - Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor (NCBI), at 1,643,657 to 1,643,896 relB b1565: ydfV - Qin prophage; predicted protein (NCBI), at 1,643,921 to 1,644,226 ydfV
Locus Name Description Strand Phenotype
b1555 ydfR Qin prophage; predicted protein (NCBI) - no data
b1556 b1556 orf, hypothetical protein (VIMSS) - sig.
b1557 cspB Qin prophage; cold shock protein (NCBI) - insig.
b1558 cspF Qin prophage; cold shock protein (NCBI) + insig.
b1559 b1559 orf, hypothetical protein (VIMSS) - sig.
b1560 ydfU Qin prophage; predicted protein (RefSeq) - sig.
b1561 rem Qin prophage; predicted protein (NCBI) - no data
b1562 hokD Qin prophage; small toxic polypeptide (NCBI) - strong
b1563 relE Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) - sig.
b1564 relB Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/ transcriptional repressor (NCBI) - no data
b1565 ydfV Qin prophage; predicted protein (NCBI) + insig.

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