Gene info for b1558 in Escherichia coli BW25113

Name: cspF
Annotation: Qin prophage; cold shock protein (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 1,639,879 to 1,640,091
See nucleotide sequence around b1558 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646313497, uniprot: P0A976

Nearby Genes

500 ntrzoQ and ydfQ are separated by 189 nucleotidesydfQ and ydfR overlap by 4 nucleotidesydfR and b1556 are separated by 4 nucleotidesb1556 and cspB are separated by 753 nucleotidescspB and cspF are separated by 300 nucleotidescspF and b1559 are separated by 421 nucleotidesb1559 and ydfU are separated by 13 nucleotidesydfU and rem are separated by 346 nucleotidesrem and hokD are separated by 216 nucleotideshokD and relE are separated by 71 nucleotides b4689: rzoQ - hypothetical protein (RefSeq), at 1,637,104 to 1,637,358 rzoQ b1554: ydfQ - Qin prophage; predicted lysozyme (NCBI), at 1,637,548 to 1,638,081 ydfQ b1555: ydfR - Qin prophage; predicted protein (NCBI), at 1,638,078 to 1,638,389 ydfR b1556: b1556 - orf, hypothetical protein (VIMSS), at 1,638,394 to 1,638,609 b1556 b1557: cspB - Qin prophage; cold shock protein (NCBI), at 1,639,363 to 1,639,578 cspB b1558: cspF - Qin prophage; cold shock protein (NCBI), at 1,639,879 to 1,640,091 cspF b1559: b1559 - orf, hypothetical protein (VIMSS), at 1,640,513 to 1,641,265 b1559 b1560: ydfU - Qin prophage; predicted protein (RefSeq), at 1,641,279 to 1,642,328 ydfU b1561: rem - Qin prophage; predicted protein (NCBI), at 1,642,675 to 1,642,926 rem b1562: hokD - Qin prophage; small toxic polypeptide (NCBI), at 1,643,143 to 1,643,298 hokD b1563: relE - Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI), at 1,643,370 to 1,643,657 relE
Locus Name Description Strand Phenotype
b4689 rzoQ hypothetical protein (RefSeq) - no data
b1554 ydfQ Qin prophage; predicted lysozyme (NCBI) - no data
b1555 ydfR Qin prophage; predicted protein (NCBI) - no data
b1556 b1556 orf, hypothetical protein (VIMSS) - sig.
b1557 cspB Qin prophage; cold shock protein (NCBI) - insig.
b1558 cspF Qin prophage; cold shock protein (NCBI) + insig.
b1559 b1559 orf, hypothetical protein (VIMSS) - sig.
b1560 ydfU Qin prophage; predicted protein (RefSeq) - sig.
b1561 rem Qin prophage; predicted protein (NCBI) - no data
b1562 hokD Qin prophage; small toxic polypeptide (NCBI) - strong
b1563 relE Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) - sig.

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