Gene info for b1343 in Escherichia coli BW25113

Name: dbpA
Annotation: ATP-dependent RNA helicase, specific for 23S rRNA (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 1,407,535 to 1,408,908
See nucleotide sequence around b1343 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646313275, uniprot: P21693

Nearby Genes

500 ntisrA and ydaL are separated by 169 nucleotidesydaL and b1341 are separated by 20 nucleotidesb1341 and ydaN are separated by 254 nucleotidesydaN and fnrS are separated by 95 nucleotidesfnrS and dbpA are separated by 260 nucleotidesdbpA and ydaO are separated by 128 nucleotidesydaO and intR are separated by 51 nucleotidesintR and ydaQ are separated by 1 nucleotidesydaQ and ydaC are separated by 78 nucleotidesydaC and lar overlap by 8 nucleotides b4426: isrA - unknown RNA (NCBI), at 1,403,676 to 1,403,833 isrA b1340: ydaL - hypothetical protein (NCBI), at 1,404,003 to 1,404,566 ydaL b1341: b1341 - orf, hypothetical protein (VIMSS), at 1,404,587 to 1,405,819 b1341 b1342: ydaN - zinc transporter (NCBI), at 1,406,074 to 1,407,057 ydaN b4699: fnrS - FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq), at 1,407,153 to 1,407,274 fnrS b1343: dbpA - ATP-dependent RNA helicase, specific for 23S rRNA (NCBI), at 1,407,535 to 1,408,908 dbpA b1344: ydaO - predicted C32 tRNA thiolase (NCBI), at 1,409,037 to 1,409,972 ydaO b1345: intR - Rac prophage; integrase (NCBI), at 1,410,024 to 1,411,259 intR b1346: ydaQ - orf, hypothetical protein (VIMSS), at 1,411,261 to 1,411,476 ydaQ b1347: ydaC - Rac prophage; predicted protein (NCBI), at 1,411,555 to 1,411,764 ydaC b1348: lar - Rac prophage; restriction alleviation protein (NCBI), at 1,411,757 to 1,411,951 lar
Locus Name Description Strand Phenotype
b4426 isrA unknown RNA (NCBI) - insig.
b1340 ydaL hypothetical protein (NCBI) + no data
b1341 b1341 orf, hypothetical protein (VIMSS) - strong
b1342 ydaN zinc transporter (NCBI) + insig.
b4699 fnrS FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) + insig.
b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) + insig.
b1344 ydaO predicted C32 tRNA thiolase (NCBI) - sig.
b1345 intR Rac prophage; integrase (NCBI) - insig.
b1346 ydaQ orf, hypothetical protein (VIMSS) - insig.
b1347 ydaC Rac prophage; predicted protein (NCBI) - insig.
b1348 lar Rac prophage; restriction alleviation protein (NCBI) - insig.

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