Gene info for b1088 in Escherichia coli BW25113

Name: yceD
Annotation: hypothetical protein (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, + strand, nucleotides 1,146,017 to 1,146,538
See nucleotide sequence around b1088 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646313003, uniprot: P0AB28

Nearby Genes

500 ntrne and b1085 are separated by 134 nucleotidesb1085 and rluC are separated by 117 nucleotidesrluC and yceF are separated by 111 nucleotidesyceF and sraB overlap by 7 nucleotidessraB and yceD are separated by 36 nucleotidesyceD and rpmF are separated by 51 nucleotidesrpmF and plsX are separated by 80 nucleotidesplsX and fabH are separated by 67 nucleotidesfabH and fabD are separated by 15 nucleotidesfabD and fabG are separated by 12 nucleotides b1084: rne - fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI), at 1,140,405 to 1,143,590 rne b1085: b1085 - orf, hypothetical protein (VIMSS), at 1,143,725 to 1,144,045 b1085 b1086: rluC - 23S rRNA pseudouridylate synthase (NCBI), at 1,144,163 to 1,145,122 rluC b1087: yceF - orf, hypothetical protein (VIMSS), at 1,145,234 to 1,145,818 yceF b4418: sraB - unknown RNA (NCBI), at 1,145,812 to 1,145,980 sraB b1088: yceD - hypothetical protein (NCBI), at 1,146,017 to 1,146,538 yceD b1089: rpmF - 50S ribosomal protein L32 (NCBI), at 1,146,590 to 1,146,763 rpmF b1090: plsX - glycerolphosphate auxotrophy in plsB background (VIMSS), at 1,146,844 to 1,147,914 plsX b1091: fabH - 3-oxoacyl-(acyl carrier protein) synthase (NCBI), at 1,147,982 to 1,148,935 fabH b1092: fabD - acyl carrier protein S-malonyltransferase (NCBI), at 1,148,951 to 1,149,880 fabD b1093: fabG - 3-oxoacyl-[acyl-carrier-protein] reductase (NCBI), at 1,149,893 to 1,150,627 fabG
Locus Name Description Strand Phenotype
b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) - strong
b1085 b1085 orf, hypothetical protein (VIMSS) + strong
b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) + strong
b1087 yceF orf, hypothetical protein (VIMSS) - insig.
b4418 sraB unknown RNA (NCBI) + sig.
b1088 yceD hypothetical protein (NCBI) + strong
b1089 rpmF 50S ribosomal protein L32 (NCBI) + no data
b1090 plsX glycerolphosphate auxotrophy in plsB background (VIMSS) + strong
b1091 fabH 3-oxoacyl-(acyl carrier protein) synthase (NCBI) + no data
b1092 fabD acyl carrier protein S-malonyltransferase (NCBI) + no data
b1093 fabG 3-oxoacyl-[acyl-carrier-protein] reductase (NCBI) + no data

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