Gene info for b1084 in Escherichia coli BW25113

Name: rne
Annotation: fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 1,140,405 to 1,143,590
See nucleotide sequence around b1084 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646312998, uniprot: P21513

Nearby Genes

500 ntflgH and flgI are separated by 11 nucleotidesflgI and flgJ overlap by 1 nucleotidesflgJ and flgK are separated by 65 nucleotidesflgK and flgL are separated by 11 nucleotidesflgL and rne are separated by 195 nucleotidesrne and b1085 are separated by 134 nucleotidesb1085 and rluC are separated by 117 nucleotidesrluC and yceF are separated by 111 nucleotidesyceF and sraB overlap by 7 nucleotidessraB and yceD are separated by 36 nucleotides b1079: flgH - flagellar L-ring protein precursor H (NCBI), at 1,134,787 to 1,135,485 flgH b1080: flgI - homolog of Salmonella P-ring of flagella basal body (VIMSS), at 1,135,497 to 1,136,594 flgI b1081: flgJ - flagellar biosynthesis protein FlgJ (NCBI), at 1,136,594 to 1,137,535 flgJ b1082: flgK - flagellar hook-associated protein K (NCBI), at 1,137,601 to 1,139,244 flgK b1083: flgL - flagellar hook-associated protein L (NCBI), at 1,139,256 to 1,140,209 flgL b1084: rne - fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI), at 1,140,405 to 1,143,590 rne b1085: b1085 - orf, hypothetical protein (VIMSS), at 1,143,725 to 1,144,045 b1085 b1086: rluC - 23S rRNA pseudouridylate synthase (NCBI), at 1,144,163 to 1,145,122 rluC b1087: yceF - orf, hypothetical protein (VIMSS), at 1,145,234 to 1,145,818 yceF b4418: sraB - unknown RNA (NCBI), at 1,145,812 to 1,145,980 sraB b1088: yceD - hypothetical protein (NCBI), at 1,146,017 to 1,146,538 yceD
Locus Name Description Strand Phenotype
b1079 flgH flagellar L-ring protein precursor H (NCBI) + strong
b1080 flgI homolog of Salmonella P-ring of flagella basal body (VIMSS) + strong
b1081 flgJ flagellar biosynthesis protein FlgJ (NCBI) + strong
b1082 flgK flagellar hook-associated protein K (NCBI) + strong
b1083 flgL flagellar hook-associated protein L (NCBI) + strong
b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) - strong
b1085 b1085 orf, hypothetical protein (VIMSS) + strong
b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) + strong
b1087 yceF orf, hypothetical protein (VIMSS) - insig.
b4418 sraB unknown RNA (NCBI) + sig.
b1088 yceD hypothetical protein (NCBI) + strong

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