Gene info for b0880 in Escherichia coli BW25113

Name: cspD
Annotation: cold shock protein homolog (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 921,589 to 921,813
See nucleotide sequence around b0880 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646312795, uniprot: P0A968

Nearby Genes

500 ntaqpZ and ybjD are separated by 425 nucleotidesybjD and ybjX overlap by 4 nucleotidesybjX and b0878 are separated by 114 nucleotidesb0878 and macB overlap by 4 nucleotidesmacB and cspD are separated by 72 nucleotidescspD and clpS are separated by 322 nucleotidesclpS and clpA are separated by 30 nucleotidesclpA and serW are separated by 343 nucleotidesserW and infA are separated by 253 nucleotidesinfA and aat are separated by 284 nucleotides b0875: aqpZ - aquaporin Z (NCBI), at 914,575 to 915,270 aqpZ b0876: ybjD - conserved protein with nucleoside triphosphate hydrolase domain (NCBI), at 915,696 to 917,354 ybjD b0877: ybjX - hypothetical protein (NCBI), at 917,351 to 918,343 ybjX b0878: b0878 - putative membrane protein (VIMSS), at 918,458 to 919,573 b0878 b0879: macB - fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI), at 919,570 to 921,516 macB b0880: cspD - cold shock protein homolog (NCBI), at 921,589 to 921,813 cspD b0881: clpS - ATP-dependent Clp protease adaptor protein ClpS (NCBI), at 922,136 to 922,456 clpS b0882: clpA - ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI), at 922,487 to 924,763 clpA b0883: serW - tRNA-Ser (NCBI), at 925,107 to 925,194 serW b0884: infA - translation initiation factor IF-1 (NCBI), at 925,448 to 925,666 infA b0885: aat - leucyl/phenylalanyl-tRNA--protein transferase (NCBI), at 925,951 to 926,655 aat
Locus Name Description Strand Phenotype
b0875 aqpZ aquaporin Z (NCBI) - sig.
b0876 ybjD conserved protein with nucleoside triphosphate hydrolase domain (NCBI) + insig.
b0877 ybjX hypothetical protein (NCBI) - strong
b0878 b0878 putative membrane protein (VIMSS) + sig.
b0879 macB fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) + strong
b0880 cspD cold shock protein homolog (NCBI) - insig.
b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) + insig.
b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) + strong
b0883 serW tRNA-Ser (NCBI) - no data
b0884 infA translation initiation factor IF-1 (NCBI) - no data
b0885 aat leucyl/phenylalanyl-tRNA--protein transferase (NCBI) - insig.

Or browse nearby genes

Or see the comparative fitness browser