Gene info for b0563 in Escherichia coli BW25113

Name: tfaX
Annotation: DLP12 prophage; predicted protein (RefSeq)
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, + strand, nucleotides 582,176 to 582,358
See nucleotide sequence around b0563 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntylcI and nohB are separated by 388 nucleotidesnohB and ylcF overlap by 26 nucleotidesylcF and tfaD overlap by 3 nucleotidestfaD and ybcY are separated by 54 nucleotidesybcY and tfaX are separated by 146 nucleotidestfaX and appY are separated by 545 nucleotidesappY and ompT are separated by 249 nucleotidesompT and pauD are separated by 423 nucleotidespauD and envY are separated by 45 nucleotidesenvY and ybcH are separated by 182 nucleotides b4589: ylcI - hypothetical protein (RefSeq), at 579,474 to 579,668 ylcI b0560: nohB - DLP12 prophage; DNA packaging protein (NCBI), at 580,057 to 580,602 nohB b4634: ylcF - no description, at 580,577 to 580,885 ylcF b0561: tfaD - orf, hypothetical protein (VIMSS), at 580,883 to 581,320 tfaD b0562: ybcY - orf, hypothetical protein (VIMSS), at 581,375 to 582,029 ybcY b0563: tfaX - DLP12 prophage; predicted protein (RefSeq), at 582,176 to 582,358 tfaX b0564: appY - DLP12 prophage; DNA-binding transcriptional activator (NCBI), at 582,904 to 583,653 appY b0565: ompT - DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI), at 583,903 to 584,856 ompT b4635: pauD - tRNA-OTHER (RefSeq), at 585,280 to 585,324 pauD b0566: envY - DNA-binding transcriptional activator of porin biosynthesis (NCBI), at 585,370 to 586,131 envY b0567: ybcH - hypothetical protein (NCBI), at 586,314 to 587,204 ybcH
Locus Name Description Strand Phenotype
b4589 ylcI hypothetical protein (RefSeq) - sig.
b0560 nohB DLP12 prophage; DNA packaging protein (NCBI) + sig.
b4634 ylcF no description + insig.
b0561 tfaD orf, hypothetical protein (VIMSS) + insig.
b0562 ybcY orf, hypothetical protein (VIMSS) - insig.
b0563 tfaX DLP12 prophage; predicted protein (RefSeq) + sig.
b0564 appY DLP12 prophage; DNA-binding transcriptional activator (NCBI) + sig.
b0565 ompT DLP12 prophage; outer membrane protease VII (outer membrane protein 3b) (NCBI) - strong
b4635 pauD tRNA-OTHER (RefSeq) + no data
b0566 envY DNA-binding transcriptional activator of porin biosynthesis (NCBI) - insig.
b0567 ybcH hypothetical protein (NCBI) - strong

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