Gene info for b0553 in Escherichia coli BW25113

Name: nmpC
Annotation: DLP12 prophage; truncated outer membrane porin (pseudogene) (RefSeq)
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold 7023, - strand, nucleotides 573,752 to 573,809
See nucleotide sequence around b0553 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc

Nearby Genes

500 ntninE and ybcO overlap by 8 nucleotidesybcO and rusA overlap by 4 nucleotidesrusA and ylcG overlap by 4 nucleotidesylcG and ybcQ are separated by 85 nucleotidesybcQ and nmpC are separated by 189 nucleotidesnmpC and insH-2 are separated by 150 nucleotidesinsH-2 and essD are separated by 1644 nucleotidesessD and ybcS overlap by 1 nucleotidesybcS and rzpD overlap by 4 nucleotides b0548: ninE - DLP12 prophage; conserved protein (NCBI), at 572,144 to 572,314 ninE b0549: ybcO - DLP12 prophage; predicted protein (NCBI), at 572,307 to 572,597 ybcO b0550: rusA - DLP12 prophage; endonuclease RUS (NCBI), at 572,594 to 572,956 rusA b4509: ylcG - DLP12 prophage; predicted protein (NCBI), at 572,953 to 573,093 ylcG b0551: ybcQ - DLP12 prophage; predicted antitermination protein (NCBI), at 573,179 to 573,562 ybcQ b0553: nmpC - DLP12 prophage; truncated outer membrane porin (pseudogene) (RefSeq), at 573,752 to 573,809 nmpC b0552: insH-2 - DLP12 prophage; IS5 transposase and trans-activator (NCBI), at 573,960 to 574,976 insH-2 b0554: essD - DLP12 prophage; predicted phage lysis protein (NCBI), at 576,621 to 576,836 essD b0555: ybcS - DLP12 prophage; predicted lysozyme (NCBI), at 576,836 to 577,333 ybcS b0556: rzpD - DLP12 prophage; predicted murein endopeptidase (NCBI), at 577,330 to 577,791 rzpD b4510: rzoD - DLP12 prophage; predicted lipoprotein (NCBI), at 577,550 to 577,732 rzoD
Locus Name Description Strand Phenotype
b0548 ninE DLP12 prophage; conserved protein (NCBI) + insig.
b0549 ybcO DLP12 prophage; predicted protein (NCBI) + insig.
b0550 rusA DLP12 prophage; endonuclease RUS (NCBI) + sig.
b4509 ylcG DLP12 prophage; predicted protein (NCBI) + strong
b0551 ybcQ DLP12 prophage; predicted antitermination protein (NCBI) + insig.
b0553 nmpC DLP12 prophage; truncated outer membrane porin (pseudogene) (RefSeq) - sig.
b0552 insH-2 DLP12 prophage; IS5 transposase and trans-activator (NCBI) - no data
b0554 essD DLP12 prophage; predicted phage lysis protein (NCBI) + insig.
b0555 ybcS DLP12 prophage; predicted lysozyme (NCBI) + sig.
b0556 rzpD DLP12 prophage; predicted murein endopeptidase (NCBI) + insig.
b4510 rzoD DLP12 prophage; predicted lipoprotein (NCBI) + no data

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