Gene info for b0108 in Escherichia coli BW25113

Name: ppdD
Annotation: predicted major pilin subunit (NCBI)
Type 1: Protein-coding gene
Located on scaffold 7023, - strand, nucleotides 117,109 to 117,549
See nucleotide sequence around b0108 or for all of scaffold 7023

Other databases: MicrobesOnline, EcoCyc, NCBI, IMG: 646312005, uniprot: P36647

Nearby Genes

500 ntyacF and coaE overlap by 1 nucleotidescoaE and guaC are separated by 224 nucleotidesguaC and hofC are separated by 34 nucleotideshofC and hofB overlap by 11 nucleotideshofB and ppdD are separated by 9 nucleotidesppdD and nadC are separated by 202 nucleotidesnadC and ampD are separated by 87 nucleotidesampD and ampE overlap by 4 nucleotidesampE and aroP are separated by 42 nucleotidesaroP and pdhR are separated by 540 nucleotides b0102: yacF - hypothetical protein (NCBI), at 111,856 to 112,599 yacF b0103: coaE - dephospho-CoA kinase (NCBI), at 112,599 to 113,219 coaE b0104: guaC - guanosine 5'-monophosphate oxidoreductase (NCBI), at 113,444 to 114,487 guaC b0106: hofC - assembly protein in type IV pilin biogenesis, transmembrane protein (NCBI), at 114,522 to 115,724 hofC b0107: hofB - conserved protein with nucleoside triphosphate hydrolase domain (NCBI), at 115,714 to 117,099 hofB b0108: ppdD - predicted major pilin subunit (NCBI), at 117,109 to 117,549 ppdD b0109: nadC - nicotinate-nucleotide pyrophosphorylase (NCBI), at 117,752 to 118,645 nadC b0110: ampD - N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI), at 118,733 to 119,284 ampD b0111: ampE - predicted inner membrane protein (NCBI), at 119,281 to 120,135 ampE b0112: aroP - aromatic amino acid transporter (NCBI), at 120,178 to 121,551 aroP b0113: pdhR - transcriptional regulator of pyruvate dehydrogenase complex (NCBI), at 122,092 to 122,856 pdhR
Locus Name Description Strand Phenotype
b0102 yacF hypothetical protein (NCBI) - strong
b0103 coaE dephospho-CoA kinase (NCBI) - no data
b0104 guaC guanosine 5'-monophosphate oxidoreductase (NCBI) + insig.
b0106 hofC assembly protein in type IV pilin biogenesis, transmembrane protein (NCBI) - insig.
b0107 hofB conserved protein with nucleoside triphosphate hydrolase domain (NCBI) - insig.
b0108 ppdD predicted major pilin subunit (NCBI) - insig.
b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) - strong
b0110 ampD N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) + strong
b0111 ampE predicted inner membrane protein (NCBI) + insig.
b0112 aroP aromatic amino acid transporter (NCBI) - sig.
b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) + strong

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