Betaproteobacteria: Ralstonia solanacearum PSI07
NCBI taxonomy id: 305
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| unrecorded | 9 | 22 |
| cpg | 1 | 2 |
| cpg no stress control | 1 | 2 |
| in planta | 4 | 16 |
| m63_quarter_strength | 1 | 3 |
| smsa no antibiotic control | 1 | 3 |
| stress | 11 | 33 |
| survival | 6 | 19 |
| survival in creek water | 17 | 17 |
| xylem sap | 1 | 3 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
108 genes with specific phenotypes, and 13 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| 4 | 17 | |
| cpg | 1 | 1 |
| cpg no stress control | 1 | 1 |
| in planta | 4 | 17 |
| m63_quarter_strength | 1 | 7 |
| stress | 5 | 29 |
| survival | 3 | 18 |
| survival in creek water | 6 | 21 |
| xylem sap | 1 | 1 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 263 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 4029 of 4968 genes.