Gammaproteobacteria: Pseudomonas segetis P6
NCBI taxonomy id: 298908
Fitness Experiments
| Group | Conditions | Experiments |
|---|---|---|
| carbon source | 2 | 4 |
| in planta | 7 | 30 |
| lb | 1 | 2 |
| stress | 8 | 34 |
| temperature | 1 | 5 |
Tools
- Build heatmap
- Experiment correlations
- KEGG maps
- KEGG overview map
- SEED subsystems
- MetaCyc pathways
- BLAST or Curated BLAST for this genome
- GapMind for amino acid biosynthesis or carbon catabolism
- ENIGMA genome browser
Specific Phenotypes
139 genes with specific phenotypes, and 9 with conserved-specific phenotypes.
| Group | # Conditions | # Genes |
|---|---|---|
| carbon source | 2 | 11 |
| in planta | 5 | 95 |
| lb | 1 | 1 |
| stress | 3 | 34 |
| temperature | 1 | 4 |
Scaffolds
Downloads
- Fitness values (tab-delimited)
- t scores (tab-delimited)
- Top cofitness for each gene (tab-delimited)
- includes 358 genes with conserved cofitness
- Specific phenotypes (tab-delimited)
- Experiment meta-data (tab-delimited)
- Reannotations (tab-delimited; includes protein sequences)
- Genome sequence (fasta)
- Protein sequences (fasta)
- List of genes (tab-delimited)
Fitness data for 3727 of 4515 genes.