Experiments in Agrobacterium fabrum C58 for carbon source
Name | Group | Condition | Description |
---|---|---|---|
set10IT054 | carbon source | 1,4-Butanediol | 1,4-Butanediol (C) |
set10IT055 | carbon source | 1,4-Butanediol | 1,4-Butanediol (C) |
set11IT008 | carbon source | 1,5-Pentanediol | 1,5-Pentanediol (C) |
set11IT009 | carbon source | 1,5-Pentanediol | 1,5-Pentanediol (C) |
set10IT040 | carbon source | 2-6-dihydroxybenzoic acid | 2-6-dihydroxybenzoic (C) |
set10IT041 | carbon source | 2-6-dihydroxybenzoic acid | 2-6-dihydroxybenzoic (C) |
set2IT050 | carbon source | 2-Keto-D-gluconic acid hemicalcium salt hydrate | 2-Keto-D-gluconic hemicalcium salt (C) |
set2IT051 | carbon source | 2-Keto-D-gluconic acid hemicalcium salt hydrate | 2-Keto-D-gluconic hemicalcium salt (C) |
set10IT094 | carbon source | 3-aminobenzoate | 3-aminobenzoate (C) |
set10IT095 | carbon source | 3-aminobenzoate | 3-aminobenzoate (C) |
set10IT036 | carbon source | 4-Aminobutyric acid | 4-Aminobutyric (C) |
set10IT037 | carbon source | 4-Aminobutyric acid | 4-Aminobutyric (C) |
set10IT038 | carbon source | 4-Hydroxybenzoic Acid | 4-Hydroxybenzoic Acid (C) |
set10IT039 | carbon source | 4-Hydroxybenzoic Acid | 4-Hydroxybenzoic Acid (C) |
set10IT042 | carbon source | 4-Hydroxybenzoic Acid | 4-Hydroxybenzoic Acid (C) |
set10IT043 | carbon source | 4-Hydroxybenzoic Acid | 4-Hydroxybenzoic Acid (C) |
set11IT020 | carbon source | 4-Hydroxyphenylpropionic acid | Phloretic Acid (C) |
set11IT021 | carbon source | 4-Hydroxyphenylpropionic acid | Phloretic Acid (C) |
set10IT044 | carbon source | a-Ketoglutaric acid disodium salt hydrate | a-Ketoglutaric (C) |
set10IT045 | carbon source | a-Ketoglutaric acid disodium salt hydrate | a-Ketoglutaric (C) |
set11IT018 | carbon source | Adipic acid | Adipic (C) |
set11IT019 | carbon source | Adipic acid | Adipic (C) |
set2IT006 | carbon source | alpha-Lactose | alpha-Lactose (C) |
set2IT007 | carbon source | alpha-Lactose | alpha-Lactose (C) |
set10IT092 | carbon source | anthranilamide | anthranilamide (C) |
set10IT093 | carbon source | anthranilamide | anthranilamide (C) |
set10IT018 | carbon source | Asolectin from soybean | Asolectin from soybean (C) |
set10IT019 | carbon source | Asolectin from soybean | Asolectin from soybean (C) |
set11IT006 | carbon source | Beta-alanine | Beta-alanine (C) |
set11IT007 | carbon source | Beta-alanine | Beta-alanine (C) |
set7IT004 | carbon source | Beta-Lactose | Beta-Lactose (C) |
set7IT014 | carbon source | Beta-Lactose | Beta-Lactose (C) |
set2IT084 | carbon source | Betanin | Betanin (C) |
set2IT085 | carbon source | Betanin | Betanin (C) |
set2IT072 | carbon source | Cellohexaose | Cellohexaose (C) |
set2IT073 | carbon source | Cellohexaose | Cellohexaose (C) |
set2IT026 | carbon source | Cellopentaose | Cellopentaose (C) |
set2IT027 | carbon source | Cellopentaose | Cellopentaose (C) |
set2IT078 | carbon source | Cellotetraose | Cellotetraose (C) |
set2IT079 | carbon source | Cellotetraose | Cellotetraose (C) |
set10IT004 | carbon source | D,L-Malic Acid | D,L-Malic Acid (C) |
set10IT005 | carbon source | D,L-Malic Acid | D,L-Malic Acid (C) |
set10IT062 | carbon source | D-(+)-melezitose monohydrate | D-(+)-melezitose (C) |
set10IT063 | carbon source | D-(+)-melezitose monohydrate | D-(+)-melezitose (C) |
set10IT014 | carbon source | D-(+)-Turanose | D-(+)-Turanose (C) |
set10IT015 | carbon source | D-(+)-Turanose | D-(+)-Turanose (C) |
set2IT070 | carbon source | D-(-)-lyxose | D-(-)-lyxose (C) |
set2IT071 | carbon source | D-(-)-lyxose | D-(-)-lyxose (C) |
set2IT012 | carbon source | D-Arabinose | D-Arabinose (C) |
set2IT013 | carbon source | D-Arabinose | D-Arabinose (C) |
set2IT030 | carbon source | D-Cellobiose | D-Cellobiose (C) |
set2IT031 | carbon source | D-Cellobiose | D-Cellobiose (C) |
set2IT038 | carbon source | D-Fructose | D-Fructose (C) |
set2IT039 | carbon source | D-Fructose | D-Fructose (C) |
set2IT028 | carbon source | D-Galactose | D-Galactose (C) |
set2IT029 | carbon source | D-Galactose | D-Galactose (C) |
set2IT046 | carbon source | D-Galacturonic Acid monohydrate | D-Galacturonic Acid (C) |
set2IT047 | carbon source | D-Galacturonic Acid monohydrate | D-Galacturonic Acid (C) |
set2IT044 | carbon source | D-Glucosamine Hydrochloride | D-Glucosamine Hydrochloride (C) |
set2IT045 | carbon source | D-Glucosamine Hydrochloride | D-Glucosamine Hydrochloride (C) |
set14IT005 | carbon source | D-Glucose | D-Glucose (C) |
set14IT013 | carbon source | D-Glucose | D-Glucose (C) |
set1IT051 | carbon source | D-Glucose | D-Glucose (C) |
set1IT052 | carbon source | D-Glucose | D-Glucose (C) |
set7IT007 | carbon source | D-Glucose | D-Glucose (C) |
set7IT017 | carbon source | D-Glucose | D-Glucose (C) |
set2IT052 | carbon source | D-Glucose-6-Phosphate sodium salt | D-Glucose-6-Phosphate (C) |
set2IT053 | carbon source | D-Glucose-6-Phosphate sodium salt | D-Glucose-6-Phosphate (C) |
set2IT062 | carbon source | D-Glucuronic acid gamma lactone | D-Glucuronic gamma lactone (C) |
set2IT063 | carbon source | D-Glucuronic acid gamma lactone | D-Glucuronic gamma lactone (C) |
set10IT006 | carbon source | D-glutamine | D-glutamine (C) |
set10IT007 | carbon source | D-glutamine | D-glutamine (C) |
set2IT082 | carbon source | D-Leucrose | D-Leucrose (C) |
set2IT083 | carbon source | D-Leucrose | D-Leucrose (C) |
set7IT002 | carbon source | D-Leucrose | D-Leucrose (C) |
set7IT012 | carbon source | D-Leucrose | D-Leucrose (C) |
set2IT010 | carbon source | D-Maltose monohydrate | D-Maltose (C) |
set2IT011 | carbon source | D-Maltose monohydrate | D-Maltose (C) |
set1IT063 | carbon source | D-Mannitol | D-Mannitol (C) |
set1IT064 | carbon source | D-Mannitol | D-Mannitol (C) |
set1IT071 | carbon source | D-Mannose | D-Mannose (C) |
set1IT072 | carbon source | D-Mannose | D-Mannose (C) |
set2IT034 | carbon source | D-Raffinose pentahydrate | D-Raffinose (C) |
set2IT035 | carbon source | D-Raffinose pentahydrate | D-Raffinose (C) |
set1IT059 | carbon source | D-Ribose | D-Ribose (C) |
set1IT060 | carbon source | D-Ribose | D-Ribose (C) |
set2IT056 | carbon source | D-Saccharic acid potassium salt | D-Saccharic potassium salt (C) |
set2IT057 | carbon source | D-Saccharic acid potassium salt | D-Saccharic potassium salt (C) |
set2IT042 | carbon source | D-Sorbitol | D-Sorbitol (C) |
set2IT043 | carbon source | D-Sorbitol | D-Sorbitol (C) |
set2IT054 | carbon source | D-Trehalose dihydrate | D-Trehalose (C) |
set2IT055 | carbon source | D-Trehalose dihydrate | D-Trehalose (C) |
set7IT005 | carbon source | D-Trehalose dihydrate | D-Trehalose (C) |
set7IT015 | carbon source | D-Trehalose dihydrate | D-Trehalose (C) |
set1IT065 | carbon source | D-Xylose | D-Xylose (C) |
set1IT066 | carbon source | D-Xylose | D-Xylose (C) |
set2IT088 | carbon source | Dextrin from potato starch | Dextrin from potato starch (C) |
set2IT089 | carbon source | Dextrin from potato starch | Dextrin from potato starch (C) |
set11IT010 | carbon source | Dihydroxyacetone | Dihydroxyacetone (C) |
set11IT011 | carbon source | Dihydroxyacetone | Dihydroxyacetone (C) |
set10IT058 | carbon source | DL-glyceraldehyde | DL-glyceraldehyde (C) |
set10IT059 | carbon source | DL-glyceraldehyde | DL-glyceraldehyde (C) |
set11IT002 | carbon source | Ethyl benzoate | Ethyl benzoate (C) |
set11IT003 | carbon source | Ethyl benzoate | Ethyl benzoate (C) |
set10IT096 | carbon source | Ferulic Acid | Ferulic Acid (C) |
set11IT001 | carbon source | Ferulic Acid | Ferulic Acid (C) |
set2IT068 | carbon source | Gentibiose | Gentibiose (C) |
set2IT069 | carbon source | Gentibiose | Gentibiose (C) |
set11IT016 | carbon source | Glutaric acid | Glutaric (C) |
set11IT017 | carbon source | Glutaric acid | Glutaric (C) |
set10IT048 | carbon source | Glycerol | Glycerol (C) |
set10IT049 | carbon source | Glycerol | Glycerol (C) |
set11IT014 | carbon source | L-(+)-Erythrulose | L-(+)-Erythrulose (C) |
set11IT015 | carbon source | L-(+)-Erythrulose | L-(+)-Erythrulose (C) |
set2IT048 | carbon source | L-(-)-sorbose | L-Sorbose (C) |
set2IT049 | carbon source | L-(-)-sorbose | L-Sorbose (C) |
set1IT069 | carbon source | L-Alanine | L-Alanine (C) |
set1IT070 | carbon source | L-Alanine | L-Alanine (C) |
set1IT053 | carbon source | L-Arabinose | L-Arabinose (C) |
set1IT054 | carbon source | L-Arabinose | L-Arabinose (C) |
set2IT004 | carbon source | L-ascorbate | L-ascorbate (C) |
set2IT005 | carbon source | L-ascorbate | L-ascorbate (C) |
set2IT024 | carbon source | L-Fucose | L-Fucose (C) |
set2IT025 | carbon source | L-Fucose | L-Fucose (C) |
set2IT040 | carbon source | L-Galactose | L-Galactose (C) |
set2IT041 | carbon source | L-Galactose | L-Galactose (C) |
set2IT008 | carbon source | L-Rhamnose monohydrate | L-Rhamnose (C) |
set2IT009 | carbon source | L-Rhamnose monohydrate | L-Rhamnose (C) |
set2IT032 | carbon source | L-Xylose | L-Xylose (C) |
set2IT033 | carbon source | L-Xylose | L-Xylose (C) |
set7IT009 | carbon source | Lactitol | Lactitol (C) |
set7IT019 | carbon source | Lactitol | Lactitol (C) |
set10IT016 | carbon source | Lactulose | Lactulose (C) |
set10IT017 | carbon source | Lactulose | Lactulose (C) |
set7IT008 | carbon source | Lactulose | Lactulose (C) |
set7IT018 | carbon source | Lactulose | Lactulose (C) |
set2IT022 | carbon source | m-Inositol | m-Inositol (C) |
set2IT023 | carbon source | m-Inositol | m-Inositol (C) |
set10IT012 | carbon source | Maltitol | Maltitol (C) |
set10IT013 | carbon source | Maltitol | Maltitol (C) |
set7IT003 | carbon source | Maltitol | Maltitol (C) |
set7IT013 | carbon source | Maltitol | Maltitol (C) |
set10IT010 | carbon source | Maltotriose hydrate | Maltotriose (C) |
set10IT011 | carbon source | Maltotriose hydrate | Maltotriose (C) |
set7IT010 | carbon source | Mannobiose | Mannobiose (C) |
set7IT020 | carbon source | Mannobiose | Mannobiose (C) |
set2IT066 | carbon source | Melibiose | Melibiose (C) |
set2IT067 | carbon source | Melibiose | Melibiose (C) |
set14IT009 | carbon source | methyl 3-keto-a-D-glucopyranoside | methyl 3-keto-a-D-glucopyranoside (C) |
set14IT017 | carbon source | methyl 3-keto-a-D-glucopyranoside | methyl 3-keto-a-D-glucopyranoside (C) |
set14IT006 | carbon source | Methyl alpha-D-glucopyranoside | Methyl alpha-D-glucopyranoside (C) |
set14IT014 | carbon source | Methyl alpha-D-glucopyranoside | Methyl alpha-D-glucopyranoside (C) |
set2IT060 | carbon source | Methyl alpha-D-glucopyranoside | Methyl alpha-D-glucopyranoside (C) |
set2IT061 | carbon source | Methyl alpha-D-glucopyranoside | Methyl alpha-D-glucopyranoside (C) |
set14IT007 | carbon source | Methyl beta-D-glucopyranoside | Methyl beta-D-glucopyranoside (C) |
set14IT015 | carbon source | Methyl beta-D-glucopyranoside | Methyl beta-D-glucopyranoside (C) |
set11IT022 | carbon source | methyl-alpha-D-xylopyranoside | methyl-alpha-D-xylopyranoside (C) |
set11IT023 | carbon source | methyl-alpha-D-xylopyranoside | methyl-alpha-D-xylopyranoside (C) |
set10IT060 | carbon source | Methyl-B-D-galactopyranoside | Methyl-B-D-galactopyranoside (C) |
set10IT061 | carbon source | Methyl-B-D-galactopyranoside | Methyl-B-D-galactopyranoside (C) |
set14IT008 | carbon source | methyl-beta-D-xylopyranoside | methyl-beta-D-xylopyranoside (C) |
set14IT016 | carbon source | methyl-beta-D-xylopyranoside | methyl-beta-D-xylopyranoside (C) |
set2IT018 | carbon source | methyl-beta-D-xylopyranoside | methyl-beta-D-xylopyranoside (C) |
set2IT019 | carbon source | methyl-beta-D-xylopyranoside | methyl-beta-D-xylopyranoside (C) |
set10IT064 | carbon source | methyl-beta-L-arabinopyranoside | methyl-beta-L-arabinopyranoside (C) |
set10IT065 | carbon source | methyl-beta-L-arabinopyranoside | methyl-beta-L-arabinopyranoside (C) |
set1IT055 | carbon source | Myristic acid | Myristic (C) |
set1IT056 | carbon source | Myristic acid | Myristic (C) |
set14IT011 | carbon source | N-Acetyl-D-Glucosamine | NAG (C) |
set14IT019 | carbon source | N-Acetyl-D-Glucosamine | NAG (C) |
set2IT074 | carbon source | N-Acetyl-D-Glucosamine | NAG (C) |
set2IT075 | carbon source | N-Acetyl-D-Glucosamine | NAG (C) |
set11IT012 | carbon source | N-alpha-Acetyl-L-glutamate | N-alpha-Acetyl-L-glutamate (C) |
set11IT013 | carbon source | N-alpha-Acetyl-L-glutamate | N-alpha-Acetyl-L-glutamate (C) |
set10IT034 | carbon source | p-Coumaric acid | p-Coumaric (C) |
set10IT035 | carbon source | p-Coumaric acid | p-Coumaric (C) |
set2IT076 | carbon source | palatinose hydrate | palatinose (C) |
set2IT077 | carbon source | palatinose hydrate | palatinose (C) |
set7IT001 | carbon source | palatinose hydrate | palatinose (C) |
set7IT011 | carbon source | palatinose hydrate | palatinose (C) |
set10IT052 | carbon source | Propan-1-ol | Propan-1-ol (C) |
set10IT053 | carbon source | Propan-1-ol | Propan-1-ol (C) |
set1IT073 | carbon source | Protocatechuic Acid | Protocatechuic Acid (C) |
set1IT074 | carbon source | Protocatechuic Acid | Protocatechuic Acid (C) |
set2IT014 | carbon source | Quinic Acid | D-Quinic (C) |
set2IT015 | carbon source | Quinic Acid | D-Quinic (C) |
set2IT086 | carbon source | Rhamnogalacturonan - from potato | Rhamnogalacturonan - from potato (C) |
set2IT087 | carbon source | Rhamnogalacturonan - from potato | Rhamnogalacturonan - from potato (C) |
set2IT020 | carbon source | Ribitol | Ribitol (C) |
set2IT021 | carbon source | Ribitol | Ribitol (C) |
set10IT050 | carbon source | sarcosine | sarcosine (C) |
set10IT051 | carbon source | sarcosine | sarcosine (C) |
set1IT057 | carbon source | Sodium acetate | acetate (C) |
set1IT058 | carbon source | Sodium acetate | acetate (C) |
set11IT004 | carbon source | Sodium cholate hydrate | cholate (C) |
set11IT005 | carbon source | Sodium cholate hydrate | cholate (C) |
set1IT067 | carbon source | Sodium Fumarate dibasic | Fumarate (C) |
set1IT068 | carbon source | Sodium Fumarate dibasic | Fumarate (C) |
set2IT016 | carbon source | Sodium gluconate | gluconate (C) |
set2IT017 | carbon source | Sodium gluconate | gluconate (C) |
set10IT046 | carbon source | Sodium pyruvate | pyruvate (C) |
set10IT047 | carbon source | Sodium pyruvate | pyruvate (C) |
set1IT061 | carbon source | Sodium succinate dibasic hexahydrate | succinate (C) |
set1IT062 | carbon source | Sodium succinate dibasic hexahydrate | succinate (C) |
set2IT058 | carbon source | Stachyose hydrate | Stachyose (C) |
set2IT059 | carbon source | Stachyose hydrate | Stachyose (C) |
set2IT036 | carbon source | Sucrose | Sucrose (C) |
set2IT037 | carbon source | Sucrose | Sucrose (C) |
set7IT006 | carbon source | Sucrose | Sucrose (C) |
set7IT016 | carbon source | Sucrose | Sucrose (C) |
set14IT010 | carbon source | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) |
set14IT018 | carbon source | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) | Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) |
set10IT008 | carbon source | trans-aconitic acid | trans-aconitic (C) |
set10IT009 | carbon source | trans-aconitic acid | trans-aconitic (C) |
set10IT056 | carbon source | Uridine 5-monophosphate disodium salt | Uridine 5-monophosphate (C) |
set10IT057 | carbon source | Uridine 5-monophosphate disodium salt | Uridine 5-monophosphate (C) |
set2IT064 | carbon source | Xylitol | Xylitol (C) |
set2IT065 | carbon source | Xylitol | Xylitol (C) |
set14IT012 | carbon source | Xylobiose | Xylobiose (C) |
set14IT020 | carbon source | Xylobiose | Xylobiose (C) |
set2IT080 | carbon source | Xylobiose | Xylobiose (C) |
set2IT081 | carbon source | Xylobiose | Xylobiose (C) |
Or see all specific phenotypes in carbon source experiments for Agrobacterium fabrum C58