Experiments in Agrobacterium fabrum C58 for carbon source

Name Group Condition Description
set10IT054 carbon source 1,4-Butanediol 1,4-Butanediol (C)
set10IT055 carbon source 1,4-Butanediol 1,4-Butanediol (C)
set11IT008 carbon source 1,5-Pentanediol 1,5-Pentanediol (C)
set11IT009 carbon source 1,5-Pentanediol 1,5-Pentanediol (C)
set10IT040 carbon source 2-6-dihydroxybenzoic acid 2-6-dihydroxybenzoic (C)
set10IT041 carbon source 2-6-dihydroxybenzoic acid 2-6-dihydroxybenzoic (C)
set2IT050 carbon source 2-Keto-D-gluconic acid hemicalcium salt hydrate 2-Keto-D-gluconic hemicalcium salt (C)
set2IT051 carbon source 2-Keto-D-gluconic acid hemicalcium salt hydrate 2-Keto-D-gluconic hemicalcium salt (C)
set10IT094 carbon source 3-aminobenzoate 3-aminobenzoate (C)
set10IT095 carbon source 3-aminobenzoate 3-aminobenzoate (C)
set10IT036 carbon source 4-Aminobutyric acid 4-Aminobutyric (C)
set10IT037 carbon source 4-Aminobutyric acid 4-Aminobutyric (C)
set10IT038 carbon source 4-Hydroxybenzoic Acid 4-Hydroxybenzoic Acid (C)
set10IT039 carbon source 4-Hydroxybenzoic Acid 4-Hydroxybenzoic Acid (C)
set10IT042 carbon source 4-Hydroxybenzoic Acid 4-Hydroxybenzoic Acid (C)
set10IT043 carbon source 4-Hydroxybenzoic Acid 4-Hydroxybenzoic Acid (C)
set11IT020 carbon source 4-Hydroxyphenylpropionic acid Phloretic Acid (C)
set11IT021 carbon source 4-Hydroxyphenylpropionic acid Phloretic Acid (C)
set10IT044 carbon source a-Ketoglutaric acid disodium salt hydrate a-Ketoglutaric (C)
set10IT045 carbon source a-Ketoglutaric acid disodium salt hydrate a-Ketoglutaric (C)
set11IT018 carbon source Adipic acid Adipic (C)
set11IT019 carbon source Adipic acid Adipic (C)
set2IT006 carbon source alpha-Lactose alpha-Lactose (C)
set2IT007 carbon source alpha-Lactose alpha-Lactose (C)
set10IT092 carbon source anthranilamide anthranilamide (C)
set10IT093 carbon source anthranilamide anthranilamide (C)
set10IT018 carbon source Asolectin from soybean Asolectin from soybean (C)
set10IT019 carbon source Asolectin from soybean Asolectin from soybean (C)
set11IT006 carbon source Beta-alanine Beta-alanine (C)
set11IT007 carbon source Beta-alanine Beta-alanine (C)
set7IT004 carbon source Beta-Lactose Beta-Lactose (C)
set7IT014 carbon source Beta-Lactose Beta-Lactose (C)
set2IT084 carbon source Betanin Betanin (C)
set2IT085 carbon source Betanin Betanin (C)
set2IT072 carbon source Cellohexaose Cellohexaose (C)
set2IT073 carbon source Cellohexaose Cellohexaose (C)
set2IT026 carbon source Cellopentaose Cellopentaose (C)
set2IT027 carbon source Cellopentaose Cellopentaose (C)
set2IT078 carbon source Cellotetraose Cellotetraose (C)
set2IT079 carbon source Cellotetraose Cellotetraose (C)
set10IT004 carbon source D,L-Malic Acid D,L-Malic Acid (C)
set10IT005 carbon source D,L-Malic Acid D,L-Malic Acid (C)
set10IT062 carbon source D-(+)-melezitose monohydrate D-(+)-melezitose (C)
set10IT063 carbon source D-(+)-melezitose monohydrate D-(+)-melezitose (C)
set10IT014 carbon source D-(+)-Turanose D-(+)-Turanose (C)
set10IT015 carbon source D-(+)-Turanose D-(+)-Turanose (C)
set2IT070 carbon source D-(-)-lyxose D-(-)-lyxose (C)
set2IT071 carbon source D-(-)-lyxose D-(-)-lyxose (C)
set2IT012 carbon source D-Arabinose D-Arabinose (C)
set2IT013 carbon source D-Arabinose D-Arabinose (C)
set2IT030 carbon source D-Cellobiose D-Cellobiose (C)
set2IT031 carbon source D-Cellobiose D-Cellobiose (C)
set2IT038 carbon source D-Fructose D-Fructose (C)
set2IT039 carbon source D-Fructose D-Fructose (C)
set2IT028 carbon source D-Galactose D-Galactose (C)
set2IT029 carbon source D-Galactose D-Galactose (C)
set2IT046 carbon source D-Galacturonic Acid monohydrate D-Galacturonic Acid (C)
set2IT047 carbon source D-Galacturonic Acid monohydrate D-Galacturonic Acid (C)
set2IT044 carbon source D-Glucosamine Hydrochloride D-Glucosamine Hydrochloride (C)
set2IT045 carbon source D-Glucosamine Hydrochloride D-Glucosamine Hydrochloride (C)
set14IT005 carbon source D-Glucose D-Glucose (C)
set14IT013 carbon source D-Glucose D-Glucose (C)
set1IT051 carbon source D-Glucose D-Glucose (C)
set1IT052 carbon source D-Glucose D-Glucose (C)
set7IT007 carbon source D-Glucose D-Glucose (C)
set7IT017 carbon source D-Glucose D-Glucose (C)
set2IT052 carbon source D-Glucose-6-Phosphate sodium salt D-Glucose-6-Phosphate (C)
set2IT053 carbon source D-Glucose-6-Phosphate sodium salt D-Glucose-6-Phosphate (C)
set2IT062 carbon source D-Glucuronic acid gamma lactone D-Glucuronic gamma lactone (C)
set2IT063 carbon source D-Glucuronic acid gamma lactone D-Glucuronic gamma lactone (C)
set10IT006 carbon source D-glutamine D-glutamine (C)
set10IT007 carbon source D-glutamine D-glutamine (C)
set2IT082 carbon source D-Leucrose D-Leucrose (C)
set2IT083 carbon source D-Leucrose D-Leucrose (C)
set7IT002 carbon source D-Leucrose D-Leucrose (C)
set7IT012 carbon source D-Leucrose D-Leucrose (C)
set2IT010 carbon source D-Maltose monohydrate D-Maltose (C)
set2IT011 carbon source D-Maltose monohydrate D-Maltose (C)
set1IT063 carbon source D-Mannitol D-Mannitol (C)
set1IT064 carbon source D-Mannitol D-Mannitol (C)
set1IT071 carbon source D-Mannose D-Mannose (C)
set1IT072 carbon source D-Mannose D-Mannose (C)
set2IT034 carbon source D-Raffinose pentahydrate D-Raffinose (C)
set2IT035 carbon source D-Raffinose pentahydrate D-Raffinose (C)
set1IT059 carbon source D-Ribose D-Ribose (C)
set1IT060 carbon source D-Ribose D-Ribose (C)
set2IT056 carbon source D-Saccharic acid potassium salt D-Saccharic potassium salt (C)
set2IT057 carbon source D-Saccharic acid potassium salt D-Saccharic potassium salt (C)
set2IT042 carbon source D-Sorbitol D-Sorbitol (C)
set2IT043 carbon source D-Sorbitol D-Sorbitol (C)
set2IT054 carbon source D-Trehalose dihydrate D-Trehalose (C)
set2IT055 carbon source D-Trehalose dihydrate D-Trehalose (C)
set7IT005 carbon source D-Trehalose dihydrate D-Trehalose (C)
set7IT015 carbon source D-Trehalose dihydrate D-Trehalose (C)
set1IT065 carbon source D-Xylose D-Xylose (C)
set1IT066 carbon source D-Xylose D-Xylose (C)
set2IT088 carbon source Dextrin from potato starch Dextrin from potato starch (C)
set2IT089 carbon source Dextrin from potato starch Dextrin from potato starch (C)
set11IT010 carbon source Dihydroxyacetone Dihydroxyacetone (C)
set11IT011 carbon source Dihydroxyacetone Dihydroxyacetone (C)
set10IT058 carbon source DL-glyceraldehyde DL-glyceraldehyde (C)
set10IT059 carbon source DL-glyceraldehyde DL-glyceraldehyde (C)
set11IT002 carbon source Ethyl benzoate Ethyl benzoate (C)
set11IT003 carbon source Ethyl benzoate Ethyl benzoate (C)
set10IT096 carbon source Ferulic Acid Ferulic Acid (C)
set11IT001 carbon source Ferulic Acid Ferulic Acid (C)
set2IT068 carbon source Gentibiose Gentibiose (C)
set2IT069 carbon source Gentibiose Gentibiose (C)
set11IT016 carbon source Glutaric acid Glutaric (C)
set11IT017 carbon source Glutaric acid Glutaric (C)
set10IT048 carbon source Glycerol Glycerol (C)
set10IT049 carbon source Glycerol Glycerol (C)
set11IT014 carbon source L-(+)-Erythrulose L-(+)-Erythrulose (C)
set11IT015 carbon source L-(+)-Erythrulose L-(+)-Erythrulose (C)
set2IT048 carbon source L-(-)-sorbose L-Sorbose (C)
set2IT049 carbon source L-(-)-sorbose L-Sorbose (C)
set1IT069 carbon source L-Alanine L-Alanine (C)
set1IT070 carbon source L-Alanine L-Alanine (C)
set1IT053 carbon source L-Arabinose L-Arabinose (C)
set1IT054 carbon source L-Arabinose L-Arabinose (C)
set2IT004 carbon source L-ascorbate L-ascorbate (C)
set2IT005 carbon source L-ascorbate L-ascorbate (C)
set2IT024 carbon source L-Fucose L-Fucose (C)
set2IT025 carbon source L-Fucose L-Fucose (C)
set2IT040 carbon source L-Galactose L-Galactose (C)
set2IT041 carbon source L-Galactose L-Galactose (C)
set2IT008 carbon source L-Rhamnose monohydrate L-Rhamnose (C)
set2IT009 carbon source L-Rhamnose monohydrate L-Rhamnose (C)
set2IT032 carbon source L-Xylose L-Xylose (C)
set2IT033 carbon source L-Xylose L-Xylose (C)
set7IT009 carbon source Lactitol Lactitol (C)
set7IT019 carbon source Lactitol Lactitol (C)
set10IT016 carbon source Lactulose Lactulose (C)
set10IT017 carbon source Lactulose Lactulose (C)
set7IT008 carbon source Lactulose Lactulose (C)
set7IT018 carbon source Lactulose Lactulose (C)
set2IT022 carbon source m-Inositol m-Inositol (C)
set2IT023 carbon source m-Inositol m-Inositol (C)
set10IT012 carbon source Maltitol Maltitol (C)
set10IT013 carbon source Maltitol Maltitol (C)
set7IT003 carbon source Maltitol Maltitol (C)
set7IT013 carbon source Maltitol Maltitol (C)
set10IT010 carbon source Maltotriose hydrate Maltotriose (C)
set10IT011 carbon source Maltotriose hydrate Maltotriose (C)
set7IT010 carbon source Mannobiose Mannobiose (C)
set7IT020 carbon source Mannobiose Mannobiose (C)
set2IT066 carbon source Melibiose Melibiose (C)
set2IT067 carbon source Melibiose Melibiose (C)
set14IT009 carbon source methyl 3-keto-a-D-glucopyranoside methyl 3-keto-a-D-glucopyranoside (C)
set14IT017 carbon source methyl 3-keto-a-D-glucopyranoside methyl 3-keto-a-D-glucopyranoside (C)
set14IT006 carbon source Methyl alpha-D-glucopyranoside Methyl alpha-D-glucopyranoside (C)
set14IT014 carbon source Methyl alpha-D-glucopyranoside Methyl alpha-D-glucopyranoside (C)
set2IT060 carbon source Methyl alpha-D-glucopyranoside Methyl alpha-D-glucopyranoside (C)
set2IT061 carbon source Methyl alpha-D-glucopyranoside Methyl alpha-D-glucopyranoside (C)
set14IT007 carbon source Methyl beta-D-glucopyranoside Methyl beta-D-glucopyranoside (C)
set14IT015 carbon source Methyl beta-D-glucopyranoside Methyl beta-D-glucopyranoside (C)
set11IT022 carbon source methyl-alpha-D-xylopyranoside methyl-alpha-D-xylopyranoside (C)
set11IT023 carbon source methyl-alpha-D-xylopyranoside methyl-alpha-D-xylopyranoside (C)
set10IT060 carbon source Methyl-B-D-galactopyranoside Methyl-B-D-galactopyranoside (C)
set10IT061 carbon source Methyl-B-D-galactopyranoside Methyl-B-D-galactopyranoside (C)
set14IT008 carbon source methyl-beta-D-xylopyranoside methyl-beta-D-xylopyranoside (C)
set14IT016 carbon source methyl-beta-D-xylopyranoside methyl-beta-D-xylopyranoside (C)
set2IT018 carbon source methyl-beta-D-xylopyranoside methyl-beta-D-xylopyranoside (C)
set2IT019 carbon source methyl-beta-D-xylopyranoside methyl-beta-D-xylopyranoside (C)
set10IT064 carbon source methyl-beta-L-arabinopyranoside methyl-beta-L-arabinopyranoside (C)
set10IT065 carbon source methyl-beta-L-arabinopyranoside methyl-beta-L-arabinopyranoside (C)
set1IT055 carbon source Myristic acid Myristic (C)
set1IT056 carbon source Myristic acid Myristic (C)
set14IT011 carbon source N-Acetyl-D-Glucosamine NAG (C)
set14IT019 carbon source N-Acetyl-D-Glucosamine NAG (C)
set2IT074 carbon source N-Acetyl-D-Glucosamine NAG (C)
set2IT075 carbon source N-Acetyl-D-Glucosamine NAG (C)
set11IT012 carbon source N-alpha-Acetyl-L-glutamate N-alpha-Acetyl-L-glutamate (C)
set11IT013 carbon source N-alpha-Acetyl-L-glutamate N-alpha-Acetyl-L-glutamate (C)
set10IT034 carbon source p-Coumaric acid p-Coumaric (C)
set10IT035 carbon source p-Coumaric acid p-Coumaric (C)
set2IT076 carbon source palatinose hydrate palatinose (C)
set2IT077 carbon source palatinose hydrate palatinose (C)
set7IT001 carbon source palatinose hydrate palatinose (C)
set7IT011 carbon source palatinose hydrate palatinose (C)
set10IT052 carbon source Propan-1-ol Propan-1-ol (C)
set10IT053 carbon source Propan-1-ol Propan-1-ol (C)
set1IT073 carbon source Protocatechuic Acid Protocatechuic Acid (C)
set1IT074 carbon source Protocatechuic Acid Protocatechuic Acid (C)
set2IT014 carbon source Quinic Acid D-Quinic (C)
set2IT015 carbon source Quinic Acid D-Quinic (C)
set2IT086 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato (C)
set2IT087 carbon source Rhamnogalacturonan - from potato Rhamnogalacturonan - from potato (C)
set2IT020 carbon source Ribitol Ribitol (C)
set2IT021 carbon source Ribitol Ribitol (C)
set10IT050 carbon source sarcosine sarcosine (C)
set10IT051 carbon source sarcosine sarcosine (C)
set1IT057 carbon source Sodium acetate acetate (C)
set1IT058 carbon source Sodium acetate acetate (C)
set11IT004 carbon source Sodium cholate hydrate cholate (C)
set11IT005 carbon source Sodium cholate hydrate cholate (C)
set1IT067 carbon source Sodium Fumarate dibasic Fumarate (C)
set1IT068 carbon source Sodium Fumarate dibasic Fumarate (C)
set2IT016 carbon source Sodium gluconate gluconate (C)
set2IT017 carbon source Sodium gluconate gluconate (C)
set10IT046 carbon source Sodium pyruvate pyruvate (C)
set10IT047 carbon source Sodium pyruvate pyruvate (C)
set1IT061 carbon source Sodium succinate dibasic hexahydrate succinate (C)
set1IT062 carbon source Sodium succinate dibasic hexahydrate succinate (C)
set2IT058 carbon source Stachyose hydrate Stachyose (C)
set2IT059 carbon source Stachyose hydrate Stachyose (C)
set2IT036 carbon source Sucrose Sucrose (C)
set2IT037 carbon source Sucrose Sucrose (C)
set7IT006 carbon source Sucrose Sucrose (C)
set7IT016 carbon source Sucrose Sucrose (C)
set14IT010 carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
set14IT018 carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
set10IT008 carbon source trans-aconitic acid trans-aconitic (C)
set10IT009 carbon source trans-aconitic acid trans-aconitic (C)
set10IT056 carbon source Uridine 5-monophosphate disodium salt Uridine 5-monophosphate (C)
set10IT057 carbon source Uridine 5-monophosphate disodium salt Uridine 5-monophosphate (C)
set2IT064 carbon source Xylitol Xylitol (C)
set2IT065 carbon source Xylitol Xylitol (C)
set14IT012 carbon source Xylobiose Xylobiose (C)
set14IT020 carbon source Xylobiose Xylobiose (C)
set2IT080 carbon source Xylobiose Xylobiose (C)
set2IT081 carbon source Xylobiose Xylobiose (C)


Or see all specific phenotypes in carbon source experiments for Agrobacterium fabrum C58