Experiment setATCH243 for Dickeya dianthicola ME23

PDB

Group: control
Media: Potato Dextrose Broth + kanamycin (50 ug/ml)
Culturing: DdiaME23, 24 well plate
By: Tyler Helmann on 1/26/21

Specific Phenotypes

For 1 genes in this experiment

For control kanamycin in Dickeya dianthicola ME23

For control kanamycin across organisms

SEED Subsystems

Subsystem	#Specific
Arginine and Ornithine Degradation	1
Polyamine Metabolism	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Urea cycle and metabolism of amino groups
• Arginine and proline metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
putrescine biosynthesis II	3	3	1
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)	3	3	1
superpathway of polyamine biosynthesis II	8	6	1