Experiment setATCH230 for Dickeya dianthicola 67-19

Compare to:

Norland

200 most detrimental genes:

  gene name fitness t score description  
HGI48_RS01985 +4.3 11.5 helix-turn-helix transcriptional regulator compare
HGI48_RS13605 +1.4 9.7 flagellar transcriptional regulator FlhC compare
HGI48_RS03150 +1.4 3.2 putative DNA-binding transcriptional regulator compare
HGI48_RS13610 +1.4 8.7 flagellar transcriptional regulator FlhD compare
HGI48_RS12650 +1.2 7.6 transcriptional regulator SlyA compare
HGI48_RS13920 +1.2 8.1 deoxyribonuclease compare
HGI48_RS21310 +1.1 9.6 ribose operon transcriptional repressor RbsR compare
HGI48_RS15695 +1.0 1.9 3-phenylpropionate MFS transporter compare
HGI48_RS08125 +1.0 1.6 MarR family transcriptional regulator compare
HGI48_RS14990 +1.0 2.9 YjfB family protein compare
HGI48_RS18545 +1.0 5.1 RNA chaperone Hfq compare
HGI48_RS09215 +0.9 2.9 microcin C ABC transporter ATP-binding protein YejF compare
HGI48_RS08890 +0.9 1.2 DNA starvation/stationary phase protection protein Dps compare
HGI48_RS15565 +0.9 2.9 YfgM family protein compare
HGI48_RS13650 +0.9 1.4 glycoside hydrolase family 104 protein compare
HGI48_RS14200 +0.9 2.2 hydrogenase maturation nickel metallochaperone HypA compare
HGI48_RS09225 +0.9 4.8 microcin C ABC transporter permease YejB compare
HGI48_RS20190 +0.9 2.2 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
HGI48_RS09500 +0.8 2.5 DUF2593 family protein compare
HGI48_RS13915 +0.8 6.1 hypothetical protein compare
HGI48_RS03715 +0.8 2.6 hypothetical protein compare
HGI48_RS13910 +0.8 4.5 hypothetical protein compare
HGI48_RS04135 +0.8 1.6 carboxymuconolactone decarboxylase family protein compare
HGI48_RS08955 +0.8 1.8 hypothetical protein compare
HGI48_RS14285 +0.8 0.8 NADH-quinone oxidoreductase subunit NuoG compare
HGI48_RS20000 +0.8 1.3 threonine export protein RhtC compare
HGI48_RS07945 +0.8 3.7 type VI secretion system contractile sheath small subunit compare
HGI48_RS13925 +0.8 4.7 hypothetical protein compare
HGI48_RS20715 +0.8 1.9 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG compare
HGI48_RS14255 +0.8 1.4 NADH-quinone oxidoreductase subunit M compare
HGI48_RS12265 +0.7 1.6 hypothetical protein compare
HGI48_RS04755 +0.7 2.7 phosphotransferase compare
HGI48_RS21315 +0.7 6.3 ribokinase compare
HGI48_RS13525 +0.7 2.8 flagellar basal body rod protein FlgB compare
HGI48_RS04380 +0.7 2.8 GNAT family N-acetyltransferase compare
HGI48_RS11210 +0.7 2.2 hypothetical protein compare
HGI48_RS18745 +0.7 3.1 MarR family transcriptional regulator compare
HGI48_RS03590 +0.7 2.0 hypothetical protein compare
HGI48_RS18090 +0.7 1.4 glucose uptake inhibitor SgrT compare
HGI48_RS15770 +0.7 1.5 tryptophan synthase subunit beta compare
HGI48_RS11130 +0.7 1.3 DNA-binding protein compare
HGI48_RS06345 +0.7 5.1 ROK family protein compare
HGI48_RS16510 +0.7 2.3 hypothetical protein compare
HGI48_RS15490 +0.7 1.3 type II secretion system protein M compare
HGI48_RS07180 +0.7 1.3 helix-turn-helix domain-containing protein compare
HGI48_RS07960 +0.7 4.5 type VI secretion system baseplate subunit TssF compare
HGI48_RS17705 +0.7 1.7 LacI family DNA-binding transcriptional regulator compare
HGI48_RS13600 +0.7 4.7 flagellar motor stator protein MotA compare
HGI48_RS10685 +0.7 2.4 DUF1283 family protein compare
HGI48_RS13595 +0.7 4.0 flagellar motor protein MotB compare
HGI48_RS10185 +0.7 2.1 DNA polymerase III subunit theta compare
HGI48_RS16560 +0.7 2.0 type I-E CRISPR-associated protein Cse2/CasB compare
HGI48_RS19245 +0.7 1.9 alternative ribosome-rescue factor A compare
HGI48_RS02900 +0.7 2.7 hypothetical protein compare
HGI48_RS10060 +0.7 2.1 hypothetical protein compare
HGI48_RS18115 +0.7 2.6 ilvB operon leader peptide IvbL compare
HGI48_RS14995 +0.6 3.2 LacI family DNA-binding transcriptional regulator compare
HGI48_RS13305 +0.6 1.3 GhoT/OrtT family toxin compare
HGI48_RS03515 +0.6 2.4 NAD-dependent epimerase/dehydratase family protein compare
HGI48_RS03300 +0.6 3.4 N-acetyltransferase compare
HGI48_RS13905 +0.6 4.0 hypothetical protein compare
HGI48_RS21040 +0.6 1.0 DUF1471 domain-containing protein compare
HGI48_RS18910 +0.6 2.3 nitrogen fixation protein NifY compare
HGI48_RS17880 +0.6 2.2 hypothetical protein compare
HGI48_RS18155 +0.6 1.7 hypothetical protein compare
HGI48_RS13530 +0.6 3.3 flagellar basal body P-ring formation protein FlgA compare
HGI48_RS05405 +0.6 2.1 hypothetical protein compare
HGI48_RS13505 +0.6 2.6 flagellar basal body rod protein FlgF compare
HGI48_RS02110 +0.6 2.6 DeoR/GlpR transcriptional regulator compare
HGI48_RS12215 +0.6 1.4 GpE family phage tail protein compare
HGI48_RS01100 +0.6 3.4 DUF1176 domain-containing protein compare
HGI48_RS10365 +0.6 3.2 thymidine kinase compare
HGI48_RS13490 +0.6 3.7 flagellar basal body P-ring protein FlgI compare
HGI48_RS06615 +0.6 2.3 efflux RND transporter permease subunit compare
HGI48_RS11650 +0.6 1.7 serine kinase compare
HGI48_RS21320 +0.6 2.5 ribose ABC transporter substrate-binding protein RbsB compare
HGI48_RS00430 +0.6 4.0 two-component system sensor histidine kinase VfmI compare
HGI48_RS13415 +0.6 4.0 flagellar motor switch protein FliG compare
HGI48_RS15235 +0.6 1.8 DksA/TraR family C4-type zinc finger protein compare
HGI48_RS09230 +0.6 4.1 ABC transporter substrate-binding protein compare
HGI48_RS03295 +0.6 2.7 SCP2 domain-containing protein compare
HGI48_RS17925 +0.6 1.5 DNA gyrase inhibitor YacG compare
HGI48_RS13680 +0.5 2.3 4'-phosphopantetheinyl transferase superfamily protein compare
HGI48_RS13500 +0.5 3.4 flagellar basal-body rod protein FlgG compare
HGI48_RS20265 +0.5 1.9 hypothetical protein compare
HGI48_RS11850 +0.5 3.0 polyamine ABC transporter substrate-binding protein compare
HGI48_RS15730 +0.5 3.9 nitrogen regulatory protein P-II compare
HGI48_RS10520 +0.5 1.8 hypothetical protein compare
HGI48_RS18870 +0.5 1.3 hypothetical protein compare
HGI48_RS12105 +0.5 1.3 replication protein B compare
HGI48_RS07980 +0.5 1.9 type VI secretion system baseplate subunit TssK compare
HGI48_RS13450 +0.5 2.4 flagellar motor switch protein FliN compare
HGI48_RS12915 +0.5 1.4 YcbX family protein compare
HGI48_RS17210 +0.5 3.5 translocation/assembly module TamB compare
HGI48_RS11880 +0.5 2.6 winged helix-turn-helix transcriptional regulator compare
HGI48_RS21640 +0.5 2.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
HGI48_RS17030 +0.5 1.3 6-carboxytetrahydropterin synthase QueD compare
HGI48_RS18390 +0.5 2.0 energy-dependent translational throttle protein EttA compare
HGI48_RS03070 +0.5 1.5 phage tail assembly protein compare
HGI48_RS14495 +0.5 2.3 type 1 glutamine amidotransferase domain-containing protein compare
HGI48_RS11220 +0.5 2.0 disulfide bond formation protein DsbB compare
HGI48_RS13385 +0.5 3.0 flagellin FliC compare
HGI48_RS18810 +0.5 1.9 radical SAM protein compare
HGI48_RS16190 +0.5 2.7 endonuclease/exonuclease/phosphatase family protein compare
HGI48_RS07025 +0.5 1.7 Trm112 family protein compare
HGI48_RS12950 +0.5 2.4 aliphatic sulfonates ABC transporter ATP-binding protein compare
HGI48_RS06155 +0.5 1.2 ArsC family reductase compare
HGI48_RS20745 +0.5 2.2 cell division protein FtsX compare
HGI48_RS15445 +0.5 1.3 hypothetical protein compare
HGI48_RS01420 +0.5 2.1 nucleoside diphosphate kinase regulator compare
HGI48_RS17740 +0.5 1.9 glucosamine kinase compare
HGI48_RS00475 +0.5 2.2 VOC family protein compare
HGI48_RS02035 +0.5 1.8 ATP-binding protein compare
HGI48_RS13495 +0.5 3.6 flagellar basal body L-ring protein FlgH compare
HGI48_RS08630 +0.5 1.9 acyl-CoA thioesterase compare
HGI48_RS04355 +0.5 1.6 oxygen-dependent coproporphyrinogen oxidase compare
HGI48_RS03820 +0.5 1.2 helix-turn-helix domain-containing protein compare
HGI48_RS20470 +0.5 1.7 ribonuclease E activity regulator RraA compare
HGI48_RS15670 +0.5 1.5 iron ABC transporter permease compare
HGI48_RS17510 +0.5 2.3 ABC transporter permease subunit compare
HGI48_RS13555 +0.5 3.7 flagellar type III secretion system protein FlhB compare
HGI48_RS17230 +0.5 2.1 DUF1107 domain-containing protein compare
HGI48_RS07965 +0.5 1.2 type VI secretion system baseplate subunit TssG compare
HGI48_RS21670 +0.5 1.2 MBL fold metallo-hydrolase compare
HGI48_RS15270 +0.5 1.4 acylphosphatase compare
HGI48_RS01365 +0.5 1.9 septum formation inhibitor Maf compare
HGI48_RS12845 +0.5 1.5 Fe-S cluster assembly scaffold SufA compare
HGI48_RS14335 +0.5 2.0 sugar phosphatase compare
HGI48_RS15960 +0.5 1.5 helix-turn-helix domain-containing protein compare
HGI48_RS01595 +0.5 2.3 DnaA initiator-associating protein DiaA compare
HGI48_RS12100 +0.5 1.8 hypothetical protein compare
HGI48_RS17215 +0.5 3.3 outer membrane protein assembly factor compare
HGI48_RS04670 +0.5 1.0 transposase compare
HGI48_RS18820 +0.5 1.1 ABC transporter ATP-binding protein compare
HGI48_RS19250 +0.5 1.6 DUF1992 domain-containing protein compare
HGI48_RS13855 +0.5 1.7 type VI secretion system tip protein VgrG compare
HGI48_RS13515 +0.5 2.9 flagellar hook assembly protein FlgD compare
HGI48_RS08360 +0.5 1.2 class I SAM-dependent methyltransferase compare
HGI48_RS13800 +0.5 2.8 UvrY/SirA/GacA family response regulator transcription factor compare
HGI48_RS04560 +0.5 1.2 LacI family DNA-binding transcriptional regulator compare
HGI48_RS04925 +0.5 2.0 DUF2884 family protein compare
HGI48_RS15110 +0.5 2.4 ATP-binding cassette domain-containing protein compare
HGI48_RS11525 +0.5 1.2 NUDIX hydrolase compare
HGI48_RS18425 +0.5 2.7 IclR family transcriptional regulator compare
HGI48_RS08740 +0.5 1.0 ABC transporter ATP-binding protein compare
HGI48_RS09020 +0.5 2.5 ABC transporter ATP-binding protein compare
HGI48_RS07510 +0.5 1.8 phosphonate ABC transporter substrate-binding protein compare
HGI48_RS07045 +0.5 1.8 transposase compare
HGI48_RS18470 +0.5 1.7 hypothetical protein compare
HGI48_RS16690 +0.5 1.4 methylthioribulose 1-phosphate dehydratase compare
HGI48_RS09165 +0.4 2.8 nucleoid-associated protein YejK compare
HGI48_RS00675 +0.4 1.5 ribonuclease PH compare
HGI48_RS01160 +0.4 1.2 HesA/MoeB/ThiF family protein compare
HGI48_RS13350 +0.4 2.2 RNA polymerase sigma factor FliA compare
HGI48_RS19585 +0.4 0.8 helix-turn-helix transcriptional regulator compare
HGI48_RS07195 +0.4 1.4 DUF1795 domain-containing protein compare
HGI48_RS20750 +0.4 0.9 cell division ATP-binding protein FtsE compare
HGI48_RS13510 +0.4 3.6 flagellar hook protein FlgE compare
HGI48_RS18595 +0.4 2.6 GDP-mannose 4,6-dehydratase compare
HGI48_RS08745 +0.4 2.1 Bax inhibitor-1 family protein compare
HGI48_RS00565 +0.4 1.7 ABC transporter permease compare
HGI48_RS08935 +0.4 1.4 allophanate hydrolase subunit 1 compare
HGI48_RS20125 +0.4 1.2 nuclear transport factor 2 family protein compare
HGI48_RS14375 +0.4 1.8 TIGR01777 family protein compare
HGI48_RS01345 +0.4 3.0 RNase E specificity factor CsrD compare
HGI48_RS05375 +0.4 2.2 HAD family hydrolase compare
HGI48_RS09370 +0.4 2.0 Tar ligand binding domain-containing protein compare
HGI48_RS08315 +0.4 1.1 replication initiator protein A compare
HGI48_RS09505 +0.4 2.6 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC compare
HGI48_RS20450 +0.4 1.7 cell division protein FtsN compare
HGI48_RS20845 +0.4 1.6 cellulose synthase compare
HGI48_RS08010 +0.4 3.3 type VI secretion system membrane subunit TssM compare
HGI48_RS13480 +0.4 3.1 flagellar hook-associated protein FlgK compare
HGI48_RS12575 +0.4 0.7 stress response translation initiation inhibitor YciH compare
HGI48_RS13285 +0.4 1.3 DUF2946 domain-containing protein compare
HGI48_RS07420 +0.4 2.2 putrescine aminotransferase compare
HGI48_RS07540 +0.4 2.3 type III PLP-dependent enzyme compare
HGI48_RS13425 +0.4 3.2 flagellum-specific ATP synthase FliI compare
HGI48_RS04835 +0.4 1.0 hypothetical protein compare
HGI48_RS10915 +0.4 2.4 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha compare
HGI48_RS16635 +0.4 1.8 hypothetical protein compare
HGI48_RS11605 +0.4 1.1 hypothetical protein compare
HGI48_RS03020 +0.4 0.9 phage tail protein compare
HGI48_RS09235 +0.4 1.7 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
HGI48_RS07955 +0.4 2.2 type VI secretion system baseplate subunit TssE compare
HGI48_RS08920 +0.4 2.7 5-oxoprolinase subunit PxpA compare
HGI48_RS04620 +0.4 2.3 queuosine precursor transporter compare
HGI48_RS16435 +0.4 2.4 HTH-type transcriptional regulator EutR compare
HGI48_RS04760 +0.4 2.6 hypothetical protein compare
HGI48_RS20305 +0.4 1.2 acetolactate synthase 2 small subunit compare
HGI48_RS20550 +0.4 2.1 phage tail protein compare
HGI48_RS03635 +0.4 1.2 helix-turn-helix transcriptional regulator compare
HGI48_RS07985 +0.4 2.4 DotU family type IV/VI secretion system protein compare
HGI48_RS05940 +0.4 2.1 transcriptional regulator RcsB compare
HGI48_RS11835 +0.4 1.7 MFS transporter compare
HGI48_RS08965 +0.4 0.6 hypothetical protein compare
HGI48_RS05755 +0.4 1.6 YbaY family lipoprotein compare
HGI48_RS07155 +0.4 1.5 TraR/DksA family transcriptional regulator compare
HGI48_RS10705 +0.4 1.5 type II toxin-antitoxin system RelE/ParE family toxin compare
HGI48_RS18585 +0.4 2.6 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola 67-19 in plant experiments

For plant cv.Norland across organisms