Experiment setATCH229 for Dickeya dianthicola 67-19

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
HGI48_RS04435 -4.1 -2.6 PTS glucose transporter subunit IIA compare
HGI48_RS14305 -3.6 -2.7 NADH-quinone oxidoreductase subunit B compare
HGI48_RS10170 -3.5 -5.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HGI48_RS15185 -3.1 -2.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
HGI48_RS18520 -3.0 -2.3 adenylosuccinate synthase compare
HGI48_RS10140 -3.0 -4.0 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HGI48_RS02290 -2.4 -4.0 hypothetical protein compare
HGI48_RS14260 -2.4 -4.7 NADH-quinone oxidoreductase subunit L compare
HGI48_RS00680 -2.4 -3.6 orotate phosphoribosyltransferase compare
HGI48_RS10430 -2.4 -3.6 TonB system transport protein TonB compare
HGI48_RS01050 -2.4 -2.5 tRNA-Thr compare
HGI48_RS16050 -2.3 -1.7 RNA polymerase-binding protein DksA compare
HGI48_RS11595 -2.2 -3.4 damage-inducible protein J compare
HGI48_RS15805 -2.2 -2.4 pyridoxine 5'-phosphate synthase compare
HGI48_RS15535 -2.2 -8.9 IMP dehydrogenase compare
HGI48_RS14035 -2.1 -2.2 LD-carboxypeptidase compare
HGI48_RS15175 -2.1 -2.2 peptidylprolyl isomerase B compare
HGI48_RS20045 -2.0 -2.4 tyrosine recombinase XerC compare
HGI48_RS12055 -2.0 -4.8 carboxy terminal-processing peptidase compare
HGI48_RS01210 -1.9 -8.9 phosphoribosylamine--glycine ligase compare
HGI48_RS13275 -1.9 -10.6 glucans biosynthesis glucosyltransferase MdoH compare
HGI48_RS13235 -1.8 -8.8 dihydroorotase compare
HGI48_RS15750 -1.8 -12.9 phosphoribosylformylglycinamidine synthase compare
HGI48_RS02385 -1.8 -6.1 phosphoserine phosphatase compare
HGI48_RS06120 -1.8 -4.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HGI48_RS18245 -1.7 -6.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
HGI48_RS17775 -1.7 -4.3 D-threonate 4-phosphate dehydrogenase compare
HGI48_RS17770 -1.7 -2.1 DeoR/GlpR transcriptional regulator compare
HGI48_RS13280 -1.7 -8.8 glucan biosynthesis protein G compare
HGI48_RS07830 -1.7 -1.9 triphosphoribosyl-dephospho-CoA synthase compare
HGI48_RS10995 -1.7 -2.5 IS21 family transposase compare
HGI48_RS14270 -1.7 -1.3 NADH-quinone oxidoreductase subunit J compare
HGI48_RS21235 -1.6 -8.4 nitrogen regulation protein NR(I) compare
HGI48_RS15190 -1.6 -4.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
HGI48_RS17565 -1.6 -4.9 alanine racemase compare
HGI48_RS18400 -1.6 -5.6 phosphoglycerate dehydrogenase compare
HGI48_RS14405 -1.6 -10.9 amidophosphoribosyltransferase compare
HGI48_RS19720 -1.5 -2.4 intracellular growth attenuator family protein compare
HGI48_RS14190 -1.5 -2.0 hydrogenase maturation factor HybG compare
HGI48_RS14280 -1.5 -2.0 NADH-quinone oxidoreductase subunit NuoH compare
HGI48_RS11375 -1.5 -2.6 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
HGI48_RS14350 -1.5 -3.6 acetate kinase compare
HGI48_RS21020 -1.5 -6.4 inorganic phosphate transporter PitA compare
HGI48_RS19070 -1.4 -3.7 fumarate reductase subunit FrdC compare
HGI48_RS16355 -1.4 -2.5 recombinase RecA compare
HGI48_RS19785 -1.4 -2.2 Fe-S biogenesis protein NfuA compare
HGI48_RS01215 -1.4 -5.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HGI48_RS11530 -1.4 -1.9 tRNA 2-thiouridine(34) synthase MnmA compare
HGI48_RS03440 -1.4 -1.7 site-specific tyrosine recombinase XerD compare
HGI48_RS06070 -1.4 -4.7 phosphoribosylformylglycinamidine cyclo-ligase compare
HGI48_RS21220 -1.3 -4.0 ribosome-dependent GTPase TypA compare
HGI48_RS18240 -1.3 -7.6 carbamoyl-phosphate synthase large subunit compare
HGI48_RS01635 -1.3 -3.2 outer membrane channel protein TolC compare
HGI48_RS06475 -1.3 -1.2 citrate synthase compare
HGI48_RS01900 -1.3 -6.7 aspartate carbamoyltransferase compare
HGI48_RS19075 -1.3 -3.0 fumarate reductase subunit FrdD compare
HGI48_RS10480 -1.3 -5.5 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
HGI48_RS21430 -1.3 -1.9 F0F1 ATP synthase subunit epsilon compare
HGI48_RS03520 -1.3 -4.1 sugar transferase compare
HGI48_RS19090 -1.3 -1.8 EF-P beta-lysylation protein EpmB compare
HGI48_RS15010 -1.3 -7.5 beta-galactosidase compare
HGI48_RS14300 -1.3 -2.0 NADH-quinone oxidoreductase subunit C/D compare
HGI48_RS01480 -1.2 -4.2 phospholipid ABC transporter ATP-binding protein MlaF compare
HGI48_RS12925 -1.2 -4.6 quinone-dependent dihydroorotate dehydrogenase compare
HGI48_RS19425 -1.2 -2.2 sulfurtransferase complex subunit TusB compare
HGI48_RS05795 -1.2 -4.9 efflux RND transporter periplasmic adaptor subunit compare
HGI48_RS05790 -1.2 -7.4 multidrug efflux RND transporter permease subunit compare
HGI48_RS19750 -1.2 -2.8 two-component system response regulator OmpR compare
HGI48_RS17235 -1.2 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
HGI48_RS06340 -1.2 -6.8 asparagine synthase B compare
HGI48_RS10335 -1.2 -4.6 formyltetrahydrofolate deformylase compare
HGI48_RS18070 -1.2 -2.4 3-isopropylmalate dehydratase small subunit compare
HGI48_RS11315 -1.2 -2.9 PTS mannose transporter subunit IIAB compare
HGI48_RS20995 -1.2 -2.8 FadR family transcriptional regulator compare
HGI48_RS03265 -1.1 -2.7 lipoprotein NlpI compare
HGI48_RS19690 -1.1 -1.2 DUF2531 family protein compare
HGI48_RS17925 -1.1 -1.9 DNA gyrase inhibitor YacG compare
HGI48_RS12355 -1.1 -3.5 LUD domain-containing protein compare
HGI48_RS12630 -1.1 -1.7 pyridoxamine 5'-phosphate oxidase compare
HGI48_RS14445 -1.1 -1.9 4-phosphoerythronate dehydrogenase PdxB compare
HGI48_RS17930 -1.1 -2.1 8-oxo-dGTP diphosphatase MutT compare
HGI48_RS05325 -1.1 -4.6 GNAT family N-acetyltransferase compare
HGI48_RS06775 -1.1 -1.5 glycosyltransferase family 2 protein compare
HGI48_RS09310 -1.1 -2.1 acyl carrier protein compare
HGI48_RS12020 -1.1 -3.5 LysR family transcriptional regulator compare
HGI48_RS02775 -1.1 -1.4 DUF883 domain-containing protein compare
HGI48_RS08440 -1.1 -3.8 P-type conjugative transfer protein TrbJ compare
HGI48_RS13305 -1.0 -1.7 GhoT/OrtT family toxin compare
HGI48_RS20035 -1.0 -2.9 DNA helicase II compare
HGI48_RS08060 -1.0 -2.8 lactate utilization protein C compare
HGI48_RS20225 -1.0 -6.0 ATP-dependent RNA helicase RhlB compare
HGI48_RS06550 -1.0 -2.0 colicin uptake protein TolR compare
HGI48_RS18060 -1.0 -5.8 3-isopropylmalate dehydrogenase compare
HGI48_RS08365 -1.0 -3.1 DNA sulfur modification protein DndE compare
HGI48_RS13200 -1.0 -3.1 phosphate acyltransferase PlsX compare
HGI48_RS12670 -1.0 -3.0 Grx4 family monothiol glutaredoxin compare
HGI48_RS08835 -1.0 -1.9 hypothetical protein compare
HGI48_RS19230 -1.0 -2.6 Trk system potassium transporter TrkA compare
HGI48_RS01465 -1.0 -5.3 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
HGI48_RS18210 -0.9 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
HGI48_RS15560 -0.9 -2.1 outer membrane protein assembly factor BamB compare
HGI48_RS20560 -0.9 -2.5 methyltransferase domain-containing protein compare
HGI48_RS01715 -0.9 -4.7 tol-pal system-associated acyl-CoA thioesterase compare
HGI48_RS06795 -0.9 -1.7 glycosyltransferase compare
HGI48_RS03715 -0.9 -1.9 hypothetical protein compare
HGI48_RS06635 -0.9 -5.8 UDP-glucose 4-epimerase GalE compare
HGI48_RS00910 -0.9 -2.8 Sec-independent protein translocase subunit TatA compare
HGI48_RS20465 -0.9 -4.7 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
HGI48_RS05560 -0.9 -1.6 transcriptional regulator NrdR compare
HGI48_RS17345 -0.9 -2.4 YggS family pyridoxal phosphate-dependent enzyme compare
HGI48_RS06085 -0.9 -1.9 DnaA inactivator Hda compare
HGI48_RS04970 -0.9 -2.2 thymidylate synthase compare
HGI48_RS05535 -0.9 -0.7 preprotein translocase subunit YajC compare
HGI48_RS18020 -0.9 -1.4 division/cell wall cluster transcriptional repressor MraZ compare
HGI48_RS06455 -0.9 -1.5 type 2 GTP cyclohydrolase I compare
HGI48_RS12960 -0.9 -2.3 nicotinate phosphoribosyltransferase compare
HGI48_RS07185 -0.9 -2.7 Hcp family type VI secretion system effector compare
HGI48_RS11145 -0.9 -1.6 hypothetical protein compare
HGI48_RS10975 -0.9 -3.2 redox-regulated ATPase YchF compare
HGI48_RS21375 -0.9 -1.9 FMN-binding protein MioC compare
HGI48_RS06155 -0.9 -2.0 ArsC family reductase compare
HGI48_RS13120 -0.9 -2.4 phosphotransferase compare
HGI48_RS19505 -0.9 -1.5 phosphotransferase compare
HGI48_RS18530 -0.8 -3.9 protease modulator HflC compare
HGI48_RS10540 -0.8 -5.0 HTH-type transcriptional regulator CysB compare
HGI48_RS18065 -0.8 -3.4 3-isopropylmalate dehydratase large subunit compare
HGI48_RS12475 -0.8 -2.5 TIGR01620 family protein compare
HGI48_RS20945 -0.8 -3.6 two-component system response regulator DcuR compare
HGI48_RS00265 -0.8 -1.8 mannitol-1-phosphate 5-dehydrogenase compare
HGI48_RS13940 -0.8 -2.6 hypothetical protein compare
HGI48_RS17195 -0.8 -1.4 hypothetical protein compare
HGI48_RS18510 -0.8 -5.7 class 1 fructose-bisphosphatase compare
HGI48_RS03325 -0.8 -2.3 purine-nucleoside phosphorylase compare
HGI48_RS20230 -0.8 -3.2 exopolyphosphatase compare
HGI48_RS10070 -0.8 -1.8 carboxy-S-adenosyl-L-methionine synthase CmoA compare
HGI48_RS18535 -0.8 -3.2 FtsH protease activity modulator HflK compare
HGI48_RS11945 -0.8 -2.0 type II toxin-antitoxin system death-on-curing family toxin compare
HGI48_RS06840 -0.8 -3.1 NADP-dependent phosphogluconate dehydrogenase compare
HGI48_RS15470 -0.8 -1.8 type II secretion system minor pseudopilin GspI compare
HGI48_RS16680 -0.8 -1.5 acireductone dioxygenase compare
HGI48_RS05650 -0.8 -1.3 cytochrome o ubiquinol oxidase subunit III compare
HGI48_RS06700 -0.8 -2.7 iron-sulfur cluster carrier protein ApbC compare
HGI48_RS00685 -0.8 -1.5 nucleoid occlusion factor SlmA compare
HGI48_RS00915 -0.8 -1.2 Sec-independent protein translocase subunit TatB compare
HGI48_RS01290 -0.8 -1.5 DNA-binding transcriptional regulator Fis compare
HGI48_RS07875 -0.8 -2.7 metal ABC transporter permease compare
HGI48_RS02100 -0.8 -4.0 DUF4276 family protein compare
HGI48_RS20735 -0.7 -2.6 aspartate 1-decarboxylase autocleavage activator PanM compare
HGI48_RS09600 -0.7 -2.6 thioredoxin-disulfide reductase compare
HGI48_RS10465 -0.7 -4.9 tryptophan synthase subunit beta compare
HGI48_RS04350 -0.7 -1.4 YaiI/YqxD family protein compare
HGI48_RS10320 -0.7 -1.2 exodeoxyribonuclease III compare
HGI48_RS08300 -0.7 -2.1 CcdB family protein compare
HGI48_RS20090 -0.7 -2.7 protoheme IX biogenesis protein HemY compare
HGI48_RS18055 -0.7 -4.9 2-isopropylmalate synthase compare
HGI48_RS09740 -0.7 -1.5 histidinol-phosphate transaminase compare
HGI48_RS00945 -0.7 -1.7 NAD(P)H-flavin reductase compare
HGI48_RS10500 -0.7 -3.2 23S rRNA pseudouridine(2605) synthase RluB compare
HGI48_RS13560 -0.7 -2.7 protein phosphatase CheZ compare
HGI48_RS06675 -0.7 -2.3 6-phosphogluconolactonase compare
HGI48_RS17750 -0.7 -2.9 ABC transporter ATP-binding protein compare
HGI48_RS02380 -0.7 -1.9 DNA repair protein RadA compare
HGI48_RS03770 -0.7 -1.9 myo-inosose-2 dehydratase compare
HGI48_RS09075 -0.7 -1.4 plasmid stabilization protein compare
HGI48_RS12865 -0.7 -2.1 AI-2E family transporter YdiK compare
HGI48_RS21480 -0.7 -3.1 hypothetical protein compare
HGI48_RS21380 -0.7 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HGI48_RS06435 -0.7 -1.2 K(+)-transporting ATPase subunit F compare
HGI48_RS18130 -0.7 -2.4 DedA family protein compare
HGI48_RS01590 -0.7 -1.1 divisome-associated lipoprotein YraP compare
HGI48_RS07575 -0.7 -4.3 iron ABC transporter permease compare
HGI48_RS12215 -0.7 -1.7 GpE family phage tail protein compare
HGI48_RS01655 -0.7 -4.3 esterase YqiA compare
HGI48_RS14640 -0.7 -5.4 TonB-dependent siderophore receptor compare
HGI48_RS01435 -0.7 -2.3 PTS IIA-like nitrogen regulatory protein PtsN compare
HGI48_RS08270 -0.7 -2.1 DNA repair protein RadC compare
HGI48_RS08380 -0.7 -4.4 DNA sulfur modification protein DndB compare
HGI48_RS04440 -0.7 -2.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
HGI48_RS12580 -0.7 -1.2 orotidine-5'-phosphate decarboxylase compare
HGI48_RS17485 -0.7 -3.0 diaminopimelate decarboxylase compare
HGI48_RS10350 -0.7 -2.8 two-component system response regulator RssB compare
HGI48_RS00740 -0.7 -2.9 glycosyltransferase family 9 protein compare
HGI48_RS01930 -0.7 -1.2 GNAT family N-acetyltransferase compare
HGI48_RS14850 -0.7 -3.5 DUF4338 domain-containing protein compare
HGI48_RS20220 -0.7 -1.1 thioredoxin TrxA compare
HGI48_RS15230 -0.7 -3.6 exopolyphosphatase compare
HGI48_RS20890 -0.7 -1.6 hypothetical protein compare
HGI48_RS06390 -0.7 -2.4 esterase compare
HGI48_RS11645 -0.7 -1.8 CesT family type III secretion system chaperone compare
HGI48_RS13755 -0.7 -1.6 acyl carrier protein compare
HGI48_RS10135 -0.7 -1.0 murein DD-endopeptidase MepM compare
HGI48_RS12805 -0.7 -2.0 pyruvate kinase PykF compare
HGI48_RS17090 -0.7 -2.6 2-hydroxy-3-oxopropionate reductase compare
HGI48_RS13110 -0.7 -2.2 alpha/beta hydrolase compare
HGI48_RS14575 -0.7 -3.1 phospholipid-binding lipoprotein MlaA compare
HGI48_RS19735 -0.7 -3.1 Hsp33 family molecular chaperone HslO compare
HGI48_RS12410 -0.7 -2.0 tRNA 2-thiocytidine(32) synthetase TtcA compare
HGI48_RS10485 -0.7 -3.6 anthranilate synthase component 1 compare
HGI48_RS17530 -0.7 -1.0 RES family NAD+ phosphorylase compare
HGI48_RS10460 -0.7 -2.8 tryptophan synthase subunit alpha compare


Specific Phenotypes

For 1 genes in this experiment

For plant cv.Norland in Dickeya dianthicola 67-19

For plant cv.Norland across organisms