Experiment setATCH228 for Dickeya dianthicola 67-19

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
HGI48_RS14270 -4.7 -2.7 NADH-quinone oxidoreductase subunit J compare
HGI48_RS18520 -3.5 -2.3 adenylosuccinate synthase compare
HGI48_RS10170 -3.2 -5.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HGI48_RS15185 -3.1 -2.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
HGI48_RS12630 -2.5 -2.3 pyridoxamine 5'-phosphate oxidase compare
HGI48_RS18400 -2.5 -8.1 phosphoglycerate dehydrogenase compare
HGI48_RS14305 -2.4 -2.6 NADH-quinone oxidoreductase subunit B compare
HGI48_RS20045 -2.3 -4.5 tyrosine recombinase XerC compare
HGI48_RS01050 -2.3 -2.6 tRNA-Thr compare
HGI48_RS15175 -2.3 -2.3 peptidylprolyl isomerase B compare
HGI48_RS18245 -2.3 -6.3 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
HGI48_RS13235 -2.2 -9.8 dihydroorotase compare
HGI48_RS10430 -2.2 -4.3 TonB system transport protein TonB compare
HGI48_RS12925 -2.2 -6.4 quinone-dependent dihydroorotate dehydrogenase compare
HGI48_RS15190 -2.2 -5.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
HGI48_RS15535 -2.2 -7.5 IMP dehydrogenase compare
HGI48_RS01210 -2.1 -10.0 phosphoribosylamine--glycine ligase compare
HGI48_RS03655 -2.1 -2.4 MarR family transcriptional regulator compare
HGI48_RS14280 -2.1 -2.3 NADH-quinone oxidoreductase subunit NuoH compare
HGI48_RS06070 -2.1 -6.2 phosphoribosylformylglycinamidine cyclo-ligase compare
HGI48_RS13275 -2.1 -12.1 glucans biosynthesis glucosyltransferase MdoH compare
HGI48_RS06120 -2.0 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HGI48_RS00795 -2.0 -2.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
HGI48_RS10480 -2.0 -6.3 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
HGI48_RS18145 -2.0 -2.0 hypothetical protein compare
HGI48_RS17770 -1.9 -2.1 DeoR/GlpR transcriptional regulator compare
HGI48_RS17565 -1.9 -5.4 alanine racemase compare
HGI48_RS12580 -1.9 -8.3 orotidine-5'-phosphate decarboxylase compare
HGI48_RS17775 -1.8 -4.2 D-threonate 4-phosphate dehydrogenase compare
HGI48_RS04970 -1.8 -3.5 thymidylate synthase compare
HGI48_RS13280 -1.8 -10.9 glucan biosynthesis protein G compare
HGI48_RS13650 -1.8 -1.7 glycoside hydrolase family 104 protein compare
HGI48_RS09745 -1.8 -4.3 histidinol dehydrogenase compare
HGI48_RS00680 -1.8 -2.2 orotate phosphoribosyltransferase compare
HGI48_RS10140 -1.8 -3.1 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HGI48_RS16355 -1.8 -3.0 recombinase RecA compare
HGI48_RS02385 -1.8 -6.5 phosphoserine phosphatase compare
HGI48_RS14405 -1.7 -10.2 amidophosphoribosyltransferase compare
HGI48_RS18075 -1.7 -2.3 siderophore-interacting protein compare
HGI48_RS15750 -1.6 -10.7 phosphoribosylformylglycinamidine synthase compare
HGI48_RS14350 -1.6 -4.9 acetate kinase compare
HGI48_RS18020 -1.6 -3.1 division/cell wall cluster transcriptional repressor MraZ compare
HGI48_RS06775 -1.6 -1.7 glycosyltransferase family 2 protein compare
HGI48_RS19720 -1.6 -2.4 intracellular growth attenuator family protein compare
HGI48_RS03215 -1.6 -1.1 preprotein translocase subunit SecG compare
HGI48_RS18070 -1.6 -5.0 3-isopropylmalate dehydratase small subunit compare
HGI48_RS21235 -1.6 -7.4 nitrogen regulation protein NR(I) compare
HGI48_RS10425 -1.5 -2.0 YciI family protein compare
HGI48_RS07055 -1.5 -2.1 IS481 family transposase compare
HGI48_RS03440 -1.5 -0.9 site-specific tyrosine recombinase XerD compare
HGI48_RS10460 -1.5 -5.7 tryptophan synthase subunit alpha compare
HGI48_RS05790 -1.5 -9.9 multidrug efflux RND transporter permease subunit compare
HGI48_RS03520 -1.5 -5.3 sugar transferase compare
HGI48_RS21020 -1.4 -6.3 inorganic phosphate transporter PitA compare
HGI48_RS08160 -1.4 -2.5 DUF1869 domain-containing protein compare
HGI48_RS12055 -1.4 -3.5 carboxy terminal-processing peptidase compare
HGI48_RS14260 -1.4 -2.1 NADH-quinone oxidoreductase subunit L compare
HGI48_RS06515 -1.4 -2.9 succinate--CoA ligase subunit alpha compare
HGI48_RS19055 -1.4 -1.7 elongation factor P--(R)-beta-lysine ligase compare
HGI48_RS20560 -1.4 -4.6 methyltransferase domain-containing protein compare
HGI48_RS16050 -1.4 -1.3 RNA polymerase-binding protein DksA compare
HGI48_RS09600 -1.4 -4.7 thioredoxin-disulfide reductase compare
HGI48_RS06795 -1.4 -2.3 glycosyltransferase compare
HGI48_RS11945 -1.3 -3.1 type II toxin-antitoxin system death-on-curing family toxin compare
HGI48_RS20845 -1.3 -2.8 cellulose synthase compare
HGI48_RS01635 -1.3 -3.3 outer membrane channel protein TolC compare
HGI48_RS05700 -1.3 -1.7 DNA-binding protein HU-beta compare
HGI48_RS10900 -1.3 -5.1 fumarate/nitrate reduction transcriptional regulator Fnr compare
HGI48_RS01215 -1.3 -5.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HGI48_RS06635 -1.3 -7.7 UDP-glucose 4-epimerase GalE compare
HGI48_RS05795 -1.3 -5.1 efflux RND transporter periplasmic adaptor subunit compare
HGI48_RS10485 -1.3 -6.3 anthranilate synthase component 1 compare
HGI48_RS01590 -1.3 -1.8 divisome-associated lipoprotein YraP compare
HGI48_RS14035 -1.3 -2.0 LD-carboxypeptidase compare
HGI48_RS18240 -1.3 -5.5 carbamoyl-phosphate synthase large subunit compare
HGI48_RS00125 -1.3 -2.3 DUF3861 domain-containing protein compare
HGI48_RS04915 -1.3 -3.8 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
HGI48_RS18065 -1.2 -5.7 3-isopropylmalate dehydratase large subunit compare
HGI48_RS10050 -1.2 -1.7 VOC family protein compare
HGI48_RS11530 -1.2 -2.4 tRNA 2-thiouridine(34) synthase MnmA compare
HGI48_RS17750 -1.2 -3.1 ABC transporter ATP-binding protein compare
HGI48_RS17000 -1.2 -4.5 uroporphyrinogen-III C-methyltransferase compare
HGI48_RS01410 -1.2 -1.2 ribosome-associated protein compare
HGI48_RS19435 -1.2 -1.1 sulfurtransferase complex subunit TusD compare
HGI48_RS11740 -1.2 -2.0 type III secretion protein compare
HGI48_RS10075 -1.2 -5.6 MAPEG family protein compare
HGI48_RS19090 -1.2 -1.5 EF-P beta-lysylation protein EpmB compare
HGI48_RS15010 -1.1 -7.1 beta-galactosidase compare
HGI48_RS03650 -1.1 -2.0 HlyD family secretion protein compare
HGI48_RS01900 -1.1 -4.5 aspartate carbamoyltransferase compare
HGI48_RS06340 -1.1 -5.5 asparagine synthase B compare
HGI48_RS02765 -1.1 -1.8 YqjK-like family protein compare
HGI48_RS20230 -1.1 -4.2 exopolyphosphatase compare
HGI48_RS18060 -1.1 -5.3 3-isopropylmalate dehydrogenase compare
HGI48_RS04670 -1.1 -1.5 transposase compare
HGI48_RS10465 -1.1 -5.6 tryptophan synthase subunit beta compare
HGI48_RS05560 -1.1 -2.1 transcriptional regulator NrdR compare
HGI48_RS06475 -1.1 -1.8 citrate synthase compare
HGI48_RS19750 -1.1 -2.7 two-component system response regulator OmpR compare
HGI48_RS10335 -1.1 -5.3 formyltetrahydrofolate deformylase compare
HGI48_RS19940 -1.1 -6.7 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
HGI48_RS21220 -1.1 -3.3 ribosome-dependent GTPase TypA compare
HGI48_RS20375 -1.1 -6.4 glutamate racemase compare
HGI48_RS05455 -1.0 -2.0 pyrimidine/purine nucleoside phosphorylase compare
HGI48_RS12430 -1.0 -2.9 thiol peroxidase compare
HGI48_RS00880 -1.0 -3.4 acetylglutamate kinase compare
HGI48_RS11310 -1.0 -7.1 TerC family protein compare
HGI48_RS08355 -1.0 -1.7 IS481 family transposase compare
HGI48_RS10375 -1.0 -3.1 YchE family NAAT transporter compare
HGI48_RS02290 -1.0 -1.7 hypothetical protein compare
HGI48_RS17195 -1.0 -1.9 hypothetical protein compare
HGI48_RS06065 -1.0 -3.0 phosphoribosylglycinamide formyltransferase compare
HGI48_RS05535 -1.0 -0.8 preprotein translocase subunit YajC compare
HGI48_RS05655 -1.0 -3.4 cytochrome o ubiquinol oxidase subunit I compare
HGI48_RS20070 -1.0 -2.6 class I adenylate cyclase compare
HGI48_RS04440 -1.0 -3.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
HGI48_RS06090 -1.0 -1.6 arsenate reductase (glutaredoxin) compare
HGI48_RS10995 -1.0 -1.7 IS21 family transposase compare
HGI48_RS17010 -0.9 -6.0 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
HGI48_RS21380 -0.9 -3.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HGI48_RS04435 -0.9 -1.3 PTS glucose transporter subunit IIA compare
HGI48_RS03265 -0.9 -2.6 lipoprotein NlpI compare
HGI48_RS14445 -0.9 -2.0 4-phosphoerythronate dehydrogenase PdxB compare
HGI48_RS07830 -0.9 -1.6 triphosphoribosyl-dephospho-CoA synthase compare
HGI48_RS01445 -0.9 -2.4 RNA polymerase factor sigma-54 compare
HGI48_RS02425 -0.9 -2.8 SDR family oxidoreductase compare
HGI48_RS15195 -0.9 -1.4 HAAAP family serine/threonine permease compare
HGI48_RS15560 -0.9 -2.1 outer membrane protein assembly factor BamB compare
HGI48_RS20895 -0.9 -3.3 helix-turn-helix transcriptional regulator compare
HGI48_RS14680 -0.9 -1.3 membrane protein YpdK compare
HGI48_RS13975 -0.9 -3.4 DNA cytosine methyltransferase compare
HGI48_RS04225 -0.9 -2.2 hypothetical protein compare
HGI48_RS12660 -0.9 -2.6 lactoylglutathione lyase compare
HGI48_RS02065 -0.9 -2.5 DUF1778 domain-containing protein compare
HGI48_RS21205 -0.9 -2.6 fatty acid biosynthesis protein FabY compare
HGI48_RS04315 -0.9 -4.1 outer membrane protein assembly factor BamE compare
HGI48_RS10540 -0.9 -4.0 HTH-type transcriptional regulator CysB compare
HGI48_RS21375 -0.9 -1.9 FMN-binding protein MioC compare
HGI48_RS02370 -0.9 -2.3 5-formyltetrahydrofolate cyclo-ligase compare
HGI48_RS06675 -0.9 -3.5 6-phosphogluconolactonase compare
HGI48_RS11325 -0.9 -2.9 PTS mannose transporter subunit IID compare
HGI48_RS20400 -0.9 -3.5 Si-specific NAD(P)(+) transhydrogenase compare
HGI48_RS04450 -0.9 -2.4 cysteine synthase A compare
HGI48_RS08365 -0.9 -2.8 DNA sulfur modification protein DndE compare
HGI48_RS12410 -0.9 -2.4 tRNA 2-thiocytidine(32) synthetase TtcA compare
HGI48_RS00990 -0.8 -4.0 Trk system potassium transporter TrkH compare
HGI48_RS07185 -0.8 -2.3 Hcp family type VI secretion system effector compare
HGI48_RS18050 -0.8 -1.7 leu operon leader peptide compare
HGI48_RS02995 -0.8 -1.6 head completion/stabilization protein compare
HGI48_RS10575 -0.8 -1.2 electron transport complex subunit RsxA compare
HGI48_RS07925 -0.8 -3.5 TetR/AcrR family transcriptional regulator compare
HGI48_RS00570 -0.8 -2.8 ABC transporter ATP-binding protein compare
HGI48_RS00685 -0.8 -1.7 nucleoid occlusion factor SlmA compare
HGI48_RS07580 -0.8 -3.1 ABC transporter ATP-binding protein compare
HGI48_RS14615 -0.8 -2.3 iron-enterobactin ABC transporter permease compare
HGI48_RS14790 -0.8 -2.0 AAA family ATPase compare
HGI48_RS03020 -0.8 -1.8 phage tail protein compare
HGI48_RS04005 -0.8 -4.1 FMN-dependent NADH-azoreductase compare
HGI48_RS14180 -0.8 -2.5 hydrogenase expression/formation protein HypE compare
HGI48_RS10475 -0.8 -1.9 anthranilate phosphoribosyltransferase compare
HGI48_RS05105 -0.8 -3.3 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
HGI48_RS04305 -0.8 -1.4 type II toxin-antitoxin system RatA family toxin compare
HGI48_RS08300 -0.8 -2.1 CcdB family protein compare
HGI48_RS20225 -0.8 -4.4 ATP-dependent RNA helicase RhlB compare
HGI48_RS18055 -0.8 -5.6 2-isopropylmalate synthase compare
HGI48_RS03185 -0.8 -1.8 transcription elongation factor GreA compare
HGI48_RS09310 -0.8 -1.3 acyl carrier protein compare
HGI48_RS14850 -0.8 -3.4 DUF4338 domain-containing protein compare
HGI48_RS06535 -0.8 -1.5 cyd operon protein YbgE compare
HGI48_RS19230 -0.8 -2.2 Trk system potassium transporter TrkA compare
HGI48_RS15295 -0.8 -2.1 DNA helicase IV compare
HGI48_RS11235 -0.8 -1.8 YcgL domain-containing protein compare
HGI48_RS17320 -0.8 -2.1 nitric oxide-sensing transcriptional repressor NsrR compare
HGI48_RS00735 -0.8 -1.3 glycosyltransferase family 4 protein compare
HGI48_RS05910 -0.8 -1.8 2Fe-2S ferredoxin-like protein compare
HGI48_RS07870 -0.8 -4.0 metal ABC transporter permease compare
HGI48_RS08475 -0.8 -1.6 hypothetical protein compare
HGI48_RS12060 -0.8 -0.7 RNA chaperone ProQ compare
HGI48_RS18605 -0.8 -3.3 ABC transporter ATP-binding protein compare
HGI48_RS01480 -0.8 -3.3 phospholipid ABC transporter ATP-binding protein MlaF compare
HGI48_RS11205 -0.8 -3.0 fatty acid metabolism transcriptional regulator FadR compare
HGI48_RS10470 -0.8 -4.0 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
HGI48_RS07570 -0.8 -2.4 iron ABC transporter permease compare
HGI48_RS12550 -0.8 -2.3 aldo/keto reductase compare
HGI48_RS14580 -0.7 -1.4 tRNA-Arg compare
HGI48_RS07180 -0.7 -1.4 helix-turn-helix domain-containing protein compare
HGI48_RS04495 -0.7 -2.4 nitric oxide reductase transcriptional regulator NorR compare
HGI48_RS19440 -0.7 -2.4 transcriptional regulator compare
HGI48_RS02300 -0.7 -1.4 type VI secretion system tube protein Hcp compare
HGI48_RS12995 -0.7 -1.5 MBL fold metallo-hydrolase compare
HGI48_RS20475 -0.7 -2.2 cell division protein ZapB compare
HGI48_RS14410 -0.7 -3.8 colicin V production protein compare
HGI48_RS12920 -0.7 -1.3 cell division protein ZapC compare
HGI48_RS00965 -0.7 -1.7 YeeE/YedE family protein compare
HGI48_RS18510 -0.7 -5.2 class 1 fructose-bisphosphatase compare
HGI48_RS14355 -0.7 -2.4 phosphate acetyltransferase compare
HGI48_RS01105 -0.7 -0.9 DUF1127 domain-containing protein compare
HGI48_RS15615 -0.7 -1.6 Fe-S cluster assembly protein IscX compare
HGI48_RS20890 -0.7 -1.8 hypothetical protein compare
HGI48_RS07165 -0.7 -2.0 AlpA family phage regulatory protein compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola 67-19 in plant experiments

For plant cv.Norland across organisms