Experiment setATCH227 for Dickeya dianthicola 67-19

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
HGI48_RS18520 -3.2 -2.7 adenylosuccinate synthase compare
HGI48_RS15185 -2.8 -2.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
HGI48_RS10140 -2.7 -4.4 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HGI48_RS16050 -2.5 -2.1 RNA polymerase-binding protein DksA compare
HGI48_RS12925 -2.3 -7.2 quinone-dependent dihydroorotate dehydrogenase compare
HGI48_RS10430 -2.2 -4.2 TonB system transport protein TonB compare
HGI48_RS00680 -2.2 -3.8 orotate phosphoribosyltransferase compare
HGI48_RS06475 -2.2 -2.7 citrate synthase compare
HGI48_RS10170 -2.2 -3.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HGI48_RS15535 -2.2 -9.7 IMP dehydrogenase compare
HGI48_RS14300 -2.1 -2.9 NADH-quinone oxidoreductase subunit C/D compare
HGI48_RS06120 -2.1 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HGI48_RS10480 -2.0 -3.9 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
HGI48_RS04435 -1.9 -2.3 PTS glucose transporter subunit IIA compare
HGI48_RS13275 -1.9 -11.8 glucans biosynthesis glucosyltransferase MdoH compare
HGI48_RS01900 -1.9 -9.2 aspartate carbamoyltransferase compare
HGI48_RS14305 -1.9 -2.4 NADH-quinone oxidoreductase subunit B compare
HGI48_RS12580 -1.8 -7.6 orotidine-5'-phosphate decarboxylase compare
HGI48_RS11375 -1.8 -4.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
HGI48_RS14445 -1.8 -2.7 4-phosphoerythronate dehydrogenase PdxB compare
HGI48_RS13280 -1.7 -10.4 glucan biosynthesis protein G compare
HGI48_RS13235 -1.7 -7.3 dihydroorotase compare
HGI48_RS06070 -1.7 -6.4 phosphoribosylformylglycinamidine cyclo-ligase compare
HGI48_RS08300 -1.7 -4.1 CcdB family protein compare
HGI48_RS03555 -1.7 -2.5 kdo(2)-lipid IV(A) palmitoleoyltransferase compare
HGI48_RS06280 -1.7 -3.5 CNNM family magnesium/cobalt transport protein CorC compare
HGI48_RS01210 -1.6 -7.2 phosphoribosylamine--glycine ligase compare
HGI48_RS19090 -1.6 -3.2 EF-P beta-lysylation protein EpmB compare
HGI48_RS15750 -1.6 -11.6 phosphoribosylformylglycinamidine synthase compare
HGI48_RS20560 -1.6 -4.9 methyltransferase domain-containing protein compare
HGI48_RS18245 -1.6 -5.3 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
HGI48_RS18400 -1.6 -5.0 phosphoglycerate dehydrogenase compare
HGI48_RS21220 -1.5 -5.4 ribosome-dependent GTPase TypA compare
HGI48_RS15190 -1.5 -4.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
HGI48_RS14260 -1.5 -2.2 NADH-quinone oxidoreductase subunit L compare
HGI48_RS10485 -1.5 -7.1 anthranilate synthase component 1 compare
HGI48_RS00915 -1.5 -2.5 Sec-independent protein translocase subunit TatB compare
HGI48_RS20045 -1.5 -2.2 tyrosine recombinase XerC compare
HGI48_RS06775 -1.5 -2.4 glycosyltransferase family 2 protein compare
HGI48_RS19055 -1.5 -2.1 elongation factor P--(R)-beta-lysine ligase compare
HGI48_RS11530 -1.5 -2.8 tRNA 2-thiouridine(34) synthase MnmA compare
HGI48_RS17565 -1.5 -5.4 alanine racemase compare
HGI48_RS17775 -1.5 -4.2 D-threonate 4-phosphate dehydrogenase compare
HGI48_RS03265 -1.5 -3.8 lipoprotein NlpI compare
HGI48_RS02290 -1.5 -2.7 hypothetical protein compare
HGI48_RS18240 -1.4 -8.5 carbamoyl-phosphate synthase large subunit compare
HGI48_RS10460 -1.4 -3.4 tryptophan synthase subunit alpha compare
HGI48_RS14405 -1.4 -9.7 amidophosphoribosyltransferase compare
HGI48_RS11310 -1.4 -7.7 TerC family protein compare
HGI48_RS01215 -1.4 -4.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HGI48_RS08365 -1.4 -4.9 DNA sulfur modification protein DndE compare
HGI48_RS01050 -1.4 -2.0 tRNA-Thr compare
HGI48_RS03440 -1.3 -1.2 site-specific tyrosine recombinase XerD compare
HGI48_RS05790 -1.3 -8.3 multidrug efflux RND transporter permease subunit compare
HGI48_RS10990 -1.3 -2.7 AAA family ATPase compare
HGI48_RS18075 -1.3 -1.7 siderophore-interacting protein compare
HGI48_RS02385 -1.3 -4.8 phosphoserine phosphatase compare
HGI48_RS14285 -1.3 -1.6 NADH-quinone oxidoreductase subunit NuoG compare
HGI48_RS16355 -1.3 -2.6 recombinase RecA compare
HGI48_RS17235 -1.3 -2.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
HGI48_RS12055 -1.2 -3.4 carboxy terminal-processing peptidase compare
HGI48_RS10075 -1.2 -6.0 MAPEG family protein compare
HGI48_RS05795 -1.2 -4.5 efflux RND transporter periplasmic adaptor subunit compare
HGI48_RS10465 -1.2 -6.3 tryptophan synthase subunit beta compare
HGI48_RS05640 -1.2 -3.1 protoheme IX farnesyltransferase compare
HGI48_RS10470 -1.2 -5.4 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
HGI48_RS11645 -1.2 -3.1 CesT family type III secretion system chaperone compare
HGI48_RS13975 -1.2 -5.4 DNA cytosine methyltransferase compare
HGI48_RS09745 -1.2 -3.4 histidinol dehydrogenase compare
HGI48_RS03215 -1.2 -1.1 preprotein translocase subunit SecG compare
HGI48_RS12355 -1.1 -3.8 LUD domain-containing protein compare
HGI48_RS01445 -1.1 -2.7 RNA polymerase factor sigma-54 compare
HGI48_RS15580 -1.1 -2.8 cytoskeleton protein RodZ compare
HGI48_RS18070 -1.1 -4.2 3-isopropylmalate dehydratase small subunit compare
HGI48_RS18065 -1.1 -5.5 3-isopropylmalate dehydratase large subunit compare
HGI48_RS17005 -1.1 -2.5 phosphoadenylyl-sulfate reductase compare
HGI48_RS10335 -1.1 -5.2 formyltetrahydrofolate deformylase compare
HGI48_RS20035 -1.1 -3.4 DNA helicase II compare
HGI48_RS06435 -1.1 -1.7 K(+)-transporting ATPase subunit F compare
HGI48_RS11950 -1.1 -2.9 type II toxin-antitoxin system prevent-host-death family antitoxin compare
HGI48_RS18600 -1.1 -4.4 ABC transporter permease compare
HGI48_RS21235 -1.1 -5.7 nitrogen regulation protein NR(I) compare
HGI48_RS04305 -1.1 -1.8 type II toxin-antitoxin system RatA family toxin compare
HGI48_RS14435 -1.1 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
HGI48_RS10435 -1.1 -3.1 acyl-CoA thioester hydrolase YciA compare
HGI48_RS10975 -1.1 -3.2 redox-regulated ATPase YchF compare
HGI48_RS04315 -1.0 -4.9 outer membrane protein assembly factor BamE compare
HGI48_RS10475 -1.0 -3.9 anthranilate phosphoribosyltransferase compare
HGI48_RS11630 -1.0 -1.6 hypothetical protein compare
HGI48_RS17805 -1.0 -1.7 YhcH/YjgK/YiaL family protein compare
HGI48_RS20455 -1.0 -2.3 ATP-dependent protease subunit HslV compare
HGI48_RS09735 -1.0 -2.0 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HGI48_RS13390 -1.0 -5.0 flagellar filament capping protein FliD compare
HGI48_RS07925 -1.0 -3.2 TetR/AcrR family transcriptional regulator compare
HGI48_RS02665 -0.9 -1.8 helix-turn-helix domain-containing protein compare
HGI48_RS20230 -0.9 -5.4 exopolyphosphatase compare
HGI48_RS10500 -0.9 -4.2 23S rRNA pseudouridine(2605) synthase RluB compare
HGI48_RS13650 -0.9 -1.3 glycoside hydrolase family 104 protein compare
HGI48_RS01290 -0.9 -1.1 DNA-binding transcriptional regulator Fis compare
HGI48_RS14615 -0.9 -2.8 iron-enterobactin ABC transporter permease compare
HGI48_RS02025 -0.9 -1.6 DNA-binding transcriptional regulator compare
HGI48_RS14525 -0.9 -2.3 penicillin-insensitive murein endopeptidase compare
HGI48_RS03520 -0.9 -3.4 sugar transferase compare
HGI48_RS05560 -0.9 -2.0 transcriptional regulator NrdR compare
HGI48_RS08355 -0.9 -2.1 IS481 family transposase compare
HGI48_RS14610 -0.9 -2.0 Fe(3+)-siderophore ABC transporter permease compare
HGI48_RS03655 -0.9 -1.6 MarR family transcriptional regulator compare
HGI48_RS04225 -0.9 -2.4 hypothetical protein compare
HGI48_RS12630 -0.9 -0.8 pyridoxamine 5'-phosphate oxidase compare
HGI48_RS17355 -0.9 -2.1 YggT family protein compare
HGI48_RS19720 -0.9 -1.4 intracellular growth attenuator family protein compare
HGI48_RS06340 -0.9 -4.8 asparagine synthase B compare
HGI48_RS06795 -0.9 -1.9 glycosyltransferase compare
HGI48_RS21380 -0.9 -2.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
HGI48_RS08160 -0.9 -2.2 DUF1869 domain-containing protein compare
HGI48_RS18055 -0.9 -6.2 2-isopropylmalate synthase compare
HGI48_RS21430 -0.9 -1.8 F0F1 ATP synthase subunit epsilon compare
HGI48_RS06480 -0.8 -1.8 succinate dehydrogenase cytochrome b556 subunit compare
HGI48_RS15930 -0.8 -1.6 TSUP family transporter compare
HGI48_RS15175 -0.8 -1.5 peptidylprolyl isomerase B compare
HGI48_RS14350 -0.8 -3.2 acetate kinase compare
HGI48_RS03510 -0.8 -6.0 polysaccharide biosynthesis protein compare
HGI48_RS21020 -0.8 -4.3 inorganic phosphate transporter PitA compare
HGI48_RS08655 -0.8 -3.8 CidB/LrgB family autolysis modulator compare
HGI48_RS10540 -0.8 -4.9 HTH-type transcriptional regulator CysB compare
HGI48_RS05860 -0.8 -3.6 Kef family K(+) transporter compare
HGI48_RS12685 -0.8 -4.1 HTH-type transcriptional repressor PurR compare
HGI48_RS18060 -0.8 -4.4 3-isopropylmalate dehydrogenase compare
HGI48_RS06065 -0.8 -2.9 phosphoribosylglycinamide formyltransferase compare
HGI48_RS19940 -0.8 -5.8 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
HGI48_RS14355 -0.8 -2.6 phosphate acetyltransferase compare
HGI48_RS11595 -0.8 -1.5 damage-inducible protein J compare
HGI48_RS18605 -0.8 -3.5 ABC transporter ATP-binding protein compare
HGI48_RS20015 -0.8 -2.4 thioesterase family protein compare
HGI48_RS18835 -0.8 -0.8 nitrogen fixation protein NifM compare
HGI48_RS06510 -0.8 -1.6 ADP-forming succinate--CoA ligase subunit beta compare
HGI48_RS21205 -0.8 -2.6 fatty acid biosynthesis protein FabY compare
HGI48_RS13395 -0.8 -2.6 flagellar export chaperone FliS compare
HGI48_RS20400 -0.8 -3.2 Si-specific NAD(P)(+) transhydrogenase compare
HGI48_RS14255 -0.8 -1.4 NADH-quinone oxidoreductase subunit M compare
HGI48_RS08425 -0.8 -2.7 TrbC/VirB2 family protein compare
HGI48_RS01635 -0.8 -1.8 outer membrane channel protein TolC compare
HGI48_RS11945 -0.8 -2.1 type II toxin-antitoxin system death-on-curing family toxin compare
HGI48_RS06785 -0.8 -1.7 glycosyl transferase compare
HGI48_RS07875 -0.8 -3.4 metal ABC transporter permease compare
HGI48_RS15010 -0.8 -5.2 beta-galactosidase compare
HGI48_RS01150 -0.7 -2.3 thiazole synthase compare
HGI48_RS19785 -0.7 -1.5 Fe-S biogenesis protein NfuA compare
HGI48_RS07570 -0.7 -2.5 iron ABC transporter permease compare
HGI48_RS04065 -0.7 -1.1 DUF736 domain-containing protein compare
HGI48_RS17195 -0.7 -1.6 hypothetical protein compare
HGI48_RS10570 -0.7 -1.8 electron transport complex subunit RsxB compare
HGI48_RS13570 -0.7 -4.2 chemotaxis response regulator protein-glutamate methylesterase compare
HGI48_RS05655 -0.7 -2.9 cytochrome o ubiquinol oxidase subunit I compare
HGI48_RS12020 -0.7 -2.4 LysR family transcriptional regulator compare
HGI48_RS04450 -0.7 -3.4 cysteine synthase A compare
HGI48_RS15560 -0.7 -1.9 outer membrane protein assembly factor BamB compare
HGI48_RS10900 -0.7 -3.1 fumarate/nitrate reduction transcriptional regulator Fnr compare
HGI48_RS04970 -0.7 -1.4 thymidylate synthase compare
HGI48_RS00155 -0.7 -1.4 ABC transporter permease compare
HGI48_RS15275 -0.7 -2.2 heat shock protein HspQ compare
HGI48_RS15865 -0.7 -5.4 ATP-dependent RNA helicase SrmB compare
HGI48_RS06490 -0.7 -4.0 succinate dehydrogenase flavoprotein subunit compare
HGI48_RS17620 -0.7 -1.8 hypothetical protein compare
HGI48_RS07295 -0.7 -2.8 addiction module antitoxin compare
HGI48_RS19690 -0.7 -0.9 DUF2531 family protein compare
HGI48_RS06440 -0.7 -1.1 YbfA family protein compare
HGI48_RS09810 -0.7 -2.1 citrate lyase holo-[acyl-carrier protein] synthase compare
HGI48_RS18510 -0.7 -5.2 class 1 fructose-bisphosphatase compare
HGI48_RS14270 -0.7 -0.8 NADH-quinone oxidoreductase subunit J compare
HGI48_RS07870 -0.7 -3.0 metal ABC transporter permease compare
HGI48_RS13210 -0.7 -2.2 23S rRNA accumulation protein YceD compare
HGI48_RS06675 -0.7 -2.6 6-phosphogluconolactonase compare
HGI48_RS05325 -0.7 -3.0 GNAT family N-acetyltransferase compare
HGI48_RS20000 -0.7 -1.6 threonine export protein RhtC compare
HGI48_RS14990 -0.7 -1.5 YjfB family protein compare
HGI48_RS21265 -0.7 -3.0 thiol:disulfide interchange protein DsbA compare
HGI48_RS14210 -0.7 -1.8 HyaD/HybD family hydrogenase maturation endopeptidase compare
HGI48_RS17090 -0.7 -2.8 2-hydroxy-3-oxopropionate reductase compare
HGI48_RS07350 -0.6 -2.0 4Fe-4S binding protein compare
HGI48_RS18125 -0.6 -1.6 acetolactate synthase small subunit compare
HGI48_RS18550 -0.6 -1.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
HGI48_RS18030 -0.6 -3.9 catabolite repressor/activator compare
HGI48_RS06635 -0.6 -4.1 UDP-glucose 4-epimerase GalE compare
HGI48_RS18020 -0.6 -1.2 division/cell wall cluster transcriptional repressor MraZ compare
HGI48_RS19820 -0.6 -1.7 DUF4276 family protein compare
HGI48_RS07580 -0.6 -2.4 ABC transporter ATP-binding protein compare
HGI48_RS10090 -0.6 -1.5 dihydroneopterin triphosphate diphosphatase compare
HGI48_RS00620 -0.6 -1.1 isoaspartyl peptidase/L-asparaginase compare
HGI48_RS19440 -0.6 -1.9 transcriptional regulator compare
HGI48_RS02790 -0.6 -2.4 transcriptional regulator ExuR compare
HGI48_RS05660 -0.6 -1.6 cytochrome o ubiquinol oxidase subunit II compare
HGI48_RS05525 -0.6 -3.2 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
HGI48_RS05470 -0.6 -2.1 fructokinase compare
HGI48_RS08710 -0.6 -2.0 molybdenum cofactor biosynthesis protein B compare
HGI48_RS18860 -0.6 -1.7 Fe-S cluster assembly protein NifU compare
HGI48_RS18535 -0.6 -2.9 FtsH protease activity modulator HflK compare
HGI48_RS16235 -0.6 -2.5 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
HGI48_RS00015 -0.6 -2.0 DNA replication/repair protein RecF compare
HGI48_RS06445 -0.6 -2.6 DUF1722 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola 67-19 in plant experiments

For plant cv.Norland across organisms