Experiment setATCH226 for Dickeya dianthicola 67-19

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
HGI48_RS18520 -3.7 -2.5 adenylosuccinate synthase compare
HGI48_RS10170 -2.8 -5.7 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HGI48_RS06775 -2.5 -2.3 glycosyltransferase family 2 protein compare
HGI48_RS12925 -2.3 -7.6 quinone-dependent dihydroorotate dehydrogenase compare
HGI48_RS15185 -2.3 -2.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
HGI48_RS13650 -2.3 -2.1 glycoside hydrolase family 104 protein compare
HGI48_RS14270 -2.2 -1.8 NADH-quinone oxidoreductase subunit J compare
HGI48_RS06795 -2.1 -3.1 glycosyltransferase compare
HGI48_RS16050 -2.1 -1.9 RNA polymerase-binding protein DksA compare
HGI48_RS12055 -2.1 -5.8 carboxy terminal-processing peptidase compare
HGI48_RS19090 -2.1 -2.4 EF-P beta-lysylation protein EpmB compare
HGI48_RS12580 -2.1 -7.5 orotidine-5'-phosphate decarboxylase compare
HGI48_RS06070 -2.1 -6.8 phosphoribosylformylglycinamidine cyclo-ligase compare
HGI48_RS13275 -2.0 -13.0 glucans biosynthesis glucosyltransferase MdoH compare
HGI48_RS06120 -2.0 -5.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HGI48_RS13280 -2.0 -11.1 glucan biosynthesis protein G compare
HGI48_RS01210 -2.0 -10.4 phosphoribosylamine--glycine ligase compare
HGI48_RS10140 -2.0 -4.1 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HGI48_RS13235 -1.9 -7.7 dihydroorotase compare
HGI48_RS00795 -1.8 -2.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
HGI48_RS00680 -1.8 -3.2 orotate phosphoribosyltransferase compare
HGI48_RS15535 -1.8 -7.2 IMP dehydrogenase compare
HGI48_RS15750 -1.8 -12.0 phosphoribosylformylglycinamidine synthase compare
HGI48_RS18245 -1.8 -5.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
HGI48_RS20560 -1.7 -5.2 methyltransferase domain-containing protein compare
HGI48_RS10460 -1.7 -6.6 tryptophan synthase subunit alpha compare
HGI48_RS14405 -1.7 -9.7 amidophosphoribosyltransferase compare
HGI48_RS18400 -1.7 -4.4 phosphoglycerate dehydrogenase compare
HGI48_RS03520 -1.6 -5.3 sugar transferase compare
HGI48_RS18240 -1.6 -8.1 carbamoyl-phosphate synthase large subunit compare
HGI48_RS14305 -1.6 -1.6 NADH-quinone oxidoreductase subunit B compare
HGI48_RS00735 -1.6 -2.2 glycosyltransferase family 4 protein compare
HGI48_RS18610 -1.6 -4.4 GDP-L-fucose synthase compare
HGI48_RS10430 -1.6 -2.9 TonB system transport protein TonB compare
HGI48_RS01050 -1.6 -2.2 tRNA-Thr compare
HGI48_RS01900 -1.6 -8.2 aspartate carbamoyltransferase compare
HGI48_RS20045 -1.5 -1.9 tyrosine recombinase XerC compare
HGI48_RS14300 -1.5 -2.3 NADH-quinone oxidoreductase subunit C/D compare
HGI48_RS08315 -1.5 -2.5 replication initiator protein A compare
HGI48_RS09265 -1.5 -3.4 1-phosphofructokinase compare
HGI48_RS03440 -1.5 -1.7 site-specific tyrosine recombinase XerD compare
HGI48_RS05790 -1.5 -9.5 multidrug efflux RND transporter permease subunit compare
HGI48_RS00955 -1.5 -1.6 helix-turn-helix transcriptional regulator compare
HGI48_RS21430 -1.5 -2.0 F0F1 ATP synthase subunit epsilon compare
HGI48_RS02290 -1.5 -2.5 hypothetical protein compare
HGI48_RS14435 -1.4 -2.2 tRNA pseudouridine(38-40) synthase TruA compare
HGI48_RS02385 -1.4 -5.8 phosphoserine phosphatase compare
HGI48_RS17235 -1.4 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
HGI48_RS03655 -1.4 -2.1 MarR family transcriptional regulator compare
HGI48_RS13545 -1.4 -2.8 flagellar protein FlhE compare
HGI48_RS19720 -1.4 -1.9 intracellular growth attenuator family protein compare
HGI48_RS00155 -1.4 -2.3 ABC transporter permease compare
HGI48_RS19690 -1.3 -1.5 DUF2531 family protein compare
HGI48_RS11310 -1.3 -8.6 TerC family protein compare
HGI48_RS10480 -1.3 -4.9 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
HGI48_RS03265 -1.3 -3.6 lipoprotein NlpI compare
HGI48_RS01215 -1.3 -4.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
HGI48_RS18020 -1.3 -2.7 division/cell wall cluster transcriptional repressor MraZ compare
HGI48_RS15190 -1.3 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
HGI48_RS16355 -1.3 -2.0 recombinase RecA compare
HGI48_RS04435 -1.3 -1.8 PTS glucose transporter subunit IIA compare
HGI48_RS10335 -1.3 -5.9 formyltetrahydrofolate deformylase compare
HGI48_RS17565 -1.3 -4.1 alanine racemase compare
HGI48_RS17770 -1.3 -1.6 DeoR/GlpR transcriptional regulator compare
HGI48_RS09730 -1.3 -4.7 imidazole glycerol phosphate synthase subunit HisH compare
HGI48_RS11375 -1.3 -2.7 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
HGI48_RS18110 -1.3 -2.0 thiamine ABC transporter ATP-binding protein ThiQ compare
HGI48_RS09745 -1.2 -3.5 histidinol dehydrogenase compare
HGI48_RS20070 -1.2 -3.8 class I adenylate cyclase compare
HGI48_RS02300 -1.2 -2.7 type VI secretion system tube protein Hcp compare
HGI48_RS12285 -1.2 -2.2 ABC transporter ATP-binding protein compare
HGI48_RS18065 -1.2 -5.8 3-isopropylmalate dehydratase large subunit compare
HGI48_RS18070 -1.2 -3.4 3-isopropylmalate dehydratase small subunit compare
HGI48_RS01590 -1.2 -1.7 divisome-associated lipoprotein YraP compare
HGI48_RS05795 -1.2 -4.3 efflux RND transporter periplasmic adaptor subunit compare
HGI48_RS17005 -1.2 -3.0 phosphoadenylyl-sulfate reductase compare
HGI48_RS10485 -1.2 -6.0 anthranilate synthase component 1 compare
HGI48_RS14210 -1.2 -2.5 HyaD/HybD family hydrogenase maturation endopeptidase compare
HGI48_RS18605 -1.2 -4.9 ABC transporter ATP-binding protein compare
HGI48_RS00740 -1.2 -4.1 glycosyltransferase family 9 protein compare
HGI48_RS12805 -1.1 -3.4 pyruvate kinase PykF compare
HGI48_RS00790 -1.1 -1.7 protein-export chaperone SecB compare
HGI48_RS18600 -1.1 -4.4 ABC transporter permease compare
HGI48_RS18125 -1.1 -2.3 acetolactate synthase small subunit compare
HGI48_RS13390 -1.1 -5.2 flagellar filament capping protein FliD compare
HGI48_RS14285 -1.1 -1.7 NADH-quinone oxidoreductase subunit NuoG compare
HGI48_RS12060 -1.1 -0.9 RNA chaperone ProQ compare
HGI48_RS10090 -1.1 -1.8 dihydroneopterin triphosphate diphosphatase compare
HGI48_RS12865 -1.1 -3.3 AI-2E family transporter YdiK compare
HGI48_RS06065 -1.1 -3.2 phosphoribosylglycinamide formyltransferase compare
HGI48_RS11530 -1.1 -1.2 tRNA 2-thiouridine(34) synthase MnmA compare
HGI48_RS20465 -1.1 -4.8 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
HGI48_RS10540 -1.1 -6.2 HTH-type transcriptional regulator CysB compare
HGI48_RS07925 -1.1 -3.9 TetR/AcrR family transcriptional regulator compare
HGI48_RS07055 -1.0 -1.3 IS481 family transposase compare
HGI48_RS06475 -1.0 -0.7 citrate synthase compare
HGI48_RS15800 -1.0 -1.4 holo-ACP synthase compare
HGI48_RS07580 -1.0 -4.1 ABC transporter ATP-binding protein compare
HGI48_RS05640 -1.0 -3.1 protoheme IX farnesyltransferase compare
HGI48_RS20230 -1.0 -4.6 exopolyphosphatase compare
HGI48_RS10465 -1.0 -5.7 tryptophan synthase subunit beta compare
HGI48_RS00095 -1.0 -0.8 PAS domain-containing protein compare
HGI48_RS11595 -1.0 -1.9 damage-inducible protein J compare
HGI48_RS21220 -1.0 -2.8 ribosome-dependent GTPase TypA compare
HGI48_RS21020 -1.0 -4.8 inorganic phosphate transporter PitA compare
HGI48_RS21265 -1.0 -3.9 thiol:disulfide interchange protein DsbA compare
HGI48_RS13015 -1.0 -2.2 EAL domain-containing protein compare
HGI48_RS15560 -1.0 -2.0 outer membrane protein assembly factor BamB compare
HGI48_RS20015 -1.0 -2.6 thioesterase family protein compare
HGI48_RS06480 -1.0 -2.1 succinate dehydrogenase cytochrome b556 subunit compare
HGI48_RS12630 -1.0 -0.8 pyridoxamine 5'-phosphate oxidase compare
HGI48_RS07115 -1.0 -1.9 EexN family lipoprotein compare
HGI48_RS21235 -0.9 -4.3 nitrogen regulation protein NR(I) compare
HGI48_RS15865 -0.9 -6.6 ATP-dependent RNA helicase SrmB compare
HGI48_RS12305 -0.9 -1.2 sodium-potassium/proton antiporter ChaA compare
HGI48_RS18055 -0.9 -6.5 2-isopropylmalate synthase compare
HGI48_RS19930 -0.9 -2.5 CpmJ protein compare
HGI48_RS14350 -0.9 -3.0 acetate kinase compare
HGI48_RS10550 -0.9 -1.9 electron transport complex subunit E compare
HGI48_RS18030 -0.9 -5.4 catabolite repressor/activator compare
HGI48_RS01290 -0.9 -1.2 DNA-binding transcriptional regulator Fis compare
HGI48_RS10975 -0.9 -3.2 redox-regulated ATPase YchF compare
HGI48_RS16605 -0.9 -1.7 glutamate 5-kinase compare
HGI48_RS06435 -0.9 -1.5 K(+)-transporting ATPase subunit F compare
HGI48_RS20995 -0.9 -2.4 FadR family transcriptional regulator compare
HGI48_RS00815 -0.9 -4.4 HTH-type transcriptional regulator MetR compare
HGI48_RS15175 -0.9 -1.4 peptidylprolyl isomerase B compare
HGI48_RS15510 -0.9 -2.2 type II secretion system pilot lipoprotein GspS compare
HGI48_RS06550 -0.9 -1.9 colicin uptake protein TolR compare
HGI48_RS14260 -0.9 -0.7 NADH-quinone oxidoreductase subunit L compare
HGI48_RS03510 -0.9 -6.2 polysaccharide biosynthesis protein compare
HGI48_RS10375 -0.9 -2.6 YchE family NAAT transporter compare
HGI48_RS06280 -0.8 -1.7 CNNM family magnesium/cobalt transport protein CorC compare
HGI48_RS10470 -0.8 -4.3 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
HGI48_RS10075 -0.8 -3.7 MAPEG family protein compare
HGI48_RS16030 -0.8 -1.8 bifunctional glycosyl transferase/transpeptidase compare
HGI48_RS19750 -0.8 -2.2 two-component system response regulator OmpR compare
HGI48_RS18175 -0.8 -1.4 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA compare
HGI48_RS06635 -0.8 -4.9 UDP-glucose 4-epimerase GalE compare
HGI48_RS21205 -0.8 -2.5 fatty acid biosynthesis protein FabY compare
HGI48_RS00620 -0.8 -1.8 isoaspartyl peptidase/L-asparaginase compare
HGI48_RS09600 -0.8 -3.2 thioredoxin-disulfide reductase compare
HGI48_RS04315 -0.8 -3.5 outer membrane protein assembly factor BamE compare
HGI48_RS06630 -0.8 -1.6 galactose-1-phosphate uridylyltransferase compare
HGI48_RS20225 -0.8 -4.6 ATP-dependent RNA helicase RhlB compare
HGI48_RS16985 -0.8 -2.2 adenylyl-sulfate kinase compare
HGI48_RS06085 -0.8 -1.9 DnaA inactivator Hda compare
HGI48_RS20220 -0.8 -0.9 thioredoxin TrxA compare
HGI48_RS01715 -0.8 -3.8 tol-pal system-associated acyl-CoA thioesterase compare
HGI48_RS17035 -0.8 -2.0 7-carboxy-7-deazaguanine synthase QueE compare
HGI48_RS13210 -0.8 -2.3 23S rRNA accumulation protein YceD compare
HGI48_RS19855 -0.8 -5.5 1,4-alpha-glucan branching protein GlgB compare
HGI48_RS07570 -0.8 -2.5 iron ABC transporter permease compare
HGI48_RS04730 -0.8 -3.1 hypothetical protein compare
HGI48_RS08355 -0.8 -1.2 IS481 family transposase compare
HGI48_RS04305 -0.8 -1.9 type II toxin-antitoxin system RatA family toxin compare
HGI48_RS18075 -0.8 -1.6 siderophore-interacting protein compare
HGI48_RS17355 -0.8 -2.3 YggT family protein compare
HGI48_RS15830 -0.8 -3.2 elongation factor 4 compare
HGI48_RS20600 -0.8 -1.9 envelope stress sensor histidine kinase CpxA compare
HGI48_RS20375 -0.8 -4.7 glutamate racemase compare
HGI48_RS19940 -0.8 -4.7 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
HGI48_RS08690 -0.8 -2.7 ATP-dependent dethiobiotin synthetase BioD compare
HGI48_RS04565 -0.8 -3.2 ribonuclease Z compare
HGI48_RS10500 -0.8 -2.4 23S rRNA pseudouridine(2605) synthase RluB compare
HGI48_RS05325 -0.8 -2.9 GNAT family N-acetyltransferase compare
HGI48_RS06675 -0.8 -3.6 6-phosphogluconolactonase compare
HGI48_RS01710 -0.7 -4.4 cystathionine beta-lyase compare
HGI48_RS06485 -0.7 -2.2 succinate dehydrogenase membrane anchor subunit compare
HGI48_RS17030 -0.7 -1.7 6-carboxytetrahydropterin synthase QueD compare
HGI48_RS14525 -0.7 -2.0 penicillin-insensitive murein endopeptidase compare
HGI48_RS15580 -0.7 -1.6 cytoskeleton protein RodZ compare
HGI48_RS07295 -0.7 -2.7 addiction module antitoxin compare
HGI48_RS08365 -0.7 -2.5 DNA sulfur modification protein DndE compare
HGI48_RS01410 -0.7 -1.0 ribosome-associated protein compare
HGI48_RS07350 -0.7 -1.6 4Fe-4S binding protein compare
HGI48_RS03135 -0.7 -1.0 malate dehydrogenase compare
HGI48_RS08580 -0.7 -1.8 type VI secretion system tip protein VgrG compare
HGI48_RS11950 -0.7 -1.3 type II toxin-antitoxin system prevent-host-death family antitoxin compare
HGI48_RS01445 -0.7 -1.3 RNA polymerase factor sigma-54 compare
HGI48_RS08300 -0.7 -2.3 CcdB family protein compare
HGI48_RS19785 -0.7 -1.8 Fe-S biogenesis protein NfuA compare
HGI48_RS15010 -0.7 -4.6 beta-galactosidase compare
HGI48_RS13975 -0.7 -2.5 DNA cytosine methyltransferase compare
HGI48_RS08895 -0.7 -3.2 threonine/homoserine exporter RhtA compare
HGI48_RS06515 -0.7 -1.7 succinate--CoA ligase subunit alpha compare
HGI48_RS06340 -0.7 -3.9 asparagine synthase B compare
HGI48_RS07430 -0.7 -2.8 DUF3916 domain-containing protein compare
HGI48_RS18910 -0.7 -2.6 nitrogen fixation protein NifY compare
HGI48_RS00475 -0.7 -1.8 VOC family protein compare
HGI48_RS01465 -0.7 -3.6 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
HGI48_RS19840 -0.7 -4.6 glycogen synthase GlgA compare
HGI48_RS13045 -0.7 -1.8 NAD-dependent protein deacylase compare
HGI48_RS14035 -0.7 -1.5 LD-carboxypeptidase compare
HGI48_RS16450 -0.7 -2.2 GTPase compare
HGI48_RS10065 -0.7 -1.9 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
HGI48_RS11110 -0.7 -1.5 CesT family type III secretion system chaperone compare
HGI48_RS00570 -0.7 -2.1 ABC transporter ATP-binding protein compare
HGI48_RS03685 -0.7 -1.2 GNAT family N-acetyltransferase compare
HGI48_RS17015 -0.7 -3.7 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola 67-19 in plant experiments

For plant cv.Norland across organisms