Experiment setATCH224 for Dickeya dianthicola 67-19

Compare to:

Atlantic

200 most important genes:

  gene name fitness t score description  
HGI48_RS14270 -4.3 -1.4 NADH-quinone oxidoreductase subunit J compare
HGI48_RS15185 -4.2 -1.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
HGI48_RS10430 -3.9 -2.0 TonB system transport protein TonB compare
HGI48_RS21475 -3.7 -1.8 acyl carrier protein compare
HGI48_RS04435 -3.7 -1.4 PTS glucose transporter subunit IIA compare
HGI48_RS16050 -3.6 -0.9 RNA polymerase-binding protein DksA compare
HGI48_RS01290 -3.6 -1.6 DNA-binding transcriptional regulator Fis compare
HGI48_RS11375 -3.5 -2.3 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
HGI48_RS15930 -3.5 -1.3 TSUP family transporter compare
HGI48_RS00095 -3.4 -1.1 PAS domain-containing protein compare
HGI48_RS16355 -3.4 -1.6 recombinase RecA compare
HGI48_RS14285 -3.3 -1.2 NADH-quinone oxidoreductase subunit NuoG compare
HGI48_RS12920 -3.3 -1.5 cell division protein ZapC compare
HGI48_RS10140 -3.3 -1.9 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
HGI48_RS01590 -3.3 -1.2 divisome-associated lipoprotein YraP compare
HGI48_RS19055 -3.1 -1.1 elongation factor P--(R)-beta-lysine ligase compare
HGI48_RS06455 -2.9 -1.3 type 2 GTP cyclohydrolase I compare
HGI48_RS06790 -2.9 -2.1 glycosyl transferase compare
HGI48_RS12570 -2.8 -2.6 osmotically-inducible lipoprotein OsmB compare
HGI48_RS00680 -2.7 -2.3 orotate phosphoribosyltransferase compare
HGI48_RS15510 -2.7 -1.6 type II secretion system pilot lipoprotein GspS compare
HGI48_RS10050 -2.6 -1.7 VOC family protein compare
HGI48_RS12865 -2.6 -3.0 AI-2E family transporter YdiK compare
HGI48_RS17445 -2.6 -1.0 PTS lactose/cellobiose transporter subunit IIA compare
HGI48_RS18070 -2.5 -3.5 3-isopropylmalate dehydratase small subunit compare
HGI48_RS12060 -2.4 -1.2 RNA chaperone ProQ compare
HGI48_RS11235 -2.4 -2.9 YcgL domain-containing protein compare
HGI48_RS19090 -2.3 -3.6 EF-P beta-lysylation protein EpmB compare
HGI48_RS21040 -2.3 -0.9 DUF1471 domain-containing protein compare
HGI48_RS07145 -2.3 -2.9 hypothetical protein compare
HGI48_RS18520 -2.3 -1.4 adenylosuccinate synthase compare
HGI48_RS18020 -2.3 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
HGI48_RS01845 -2.3 -2.9 ABC transporter permease compare
HGI48_RS02010 -2.2 -2.6 AlpA family transcriptional regulator compare
HGI48_RS15535 -2.1 -6.3 IMP dehydrogenase compare
HGI48_RS04450 -2.1 -4.3 cysteine synthase A compare
HGI48_RS17235 -2.0 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
HGI48_RS03440 -2.0 -0.9 site-specific tyrosine recombinase XerD compare
HGI48_RS07925 -2.0 -3.0 TetR/AcrR family transcriptional regulator compare
HGI48_RS08355 -1.9 -2.0 IS481 family transposase compare
HGI48_RS20000 -1.9 -1.8 threonine export protein RhtC compare
HGI48_RS12925 -1.9 -4.1 quinone-dependent dihydroorotate dehydrogenase compare
HGI48_RS13280 -1.9 -9.5 glucan biosynthesis protein G compare
HGI48_RS06735 -1.9 -1.3 protein-tyrosine-phosphatase compare
HGI48_RS18600 -1.9 -4.7 ABC transporter permease compare
HGI48_RS09735 -1.8 -2.6 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
HGI48_RS05860 -1.8 -3.7 Kef family K(+) transporter compare
HGI48_RS00395 -1.8 -2.8 VfmB protein compare
HGI48_RS11530 -1.8 -1.8 tRNA 2-thiouridine(34) synthase MnmA compare
HGI48_RS14580 -1.8 -1.4 tRNA-Arg compare
HGI48_RS14035 -1.8 -1.7 LD-carboxypeptidase compare
HGI48_RS02385 -1.8 -5.7 phosphoserine phosphatase compare
HGI48_RS19720 -1.8 -1.9 intracellular growth attenuator family protein compare
HGI48_RS21015 -1.8 -3.3 universal stress protein UspB compare
HGI48_RS12580 -1.8 -5.7 orotidine-5'-phosphate decarboxylase compare
HGI48_RS10475 -1.8 -3.0 anthranilate phosphoribosyltransferase compare
HGI48_RS10035 -1.8 -2.1 hypothetical protein compare
HGI48_RS10500 -1.8 -4.4 23S rRNA pseudouridine(2605) synthase RluB compare
HGI48_RS18245 -1.8 -4.5 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
HGI48_RS08525 -1.7 -1.5 DNA-damage-inducible protein J compare
HGI48_RS10170 -1.7 -2.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
HGI48_RS06155 -1.7 -2.2 ArsC family reductase compare
HGI48_RS18550 -1.7 -2.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
HGI48_RS14710 -1.7 -2.2 type II secretion system minor pseudopilin GspI compare
HGI48_RS02665 -1.7 -1.4 helix-turn-helix domain-containing protein compare
HGI48_RS06120 -1.7 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
HGI48_RS10885 -1.6 -3.1 superoxide dismutase family protein compare
HGI48_RS03770 -1.6 -2.5 myo-inosose-2 dehydratase compare
HGI48_RS00880 -1.6 -3.7 acetylglutamate kinase compare
HGI48_RS10075 -1.6 -5.4 MAPEG family protein compare
HGI48_RS01900 -1.6 -6.4 aspartate carbamoyltransferase compare
HGI48_RS20890 -1.6 -2.2 hypothetical protein compare
HGI48_RS10550 -1.6 -1.7 electron transport complex subunit E compare
HGI48_RS03520 -1.6 -4.8 sugar transferase compare
HGI48_RS14350 -1.6 -3.5 acetate kinase compare
HGI48_RS10335 -1.6 -4.8 formyltetrahydrofolate deformylase compare
HGI48_RS01480 -1.6 -5.0 phospholipid ABC transporter ATP-binding protein MlaF compare
HGI48_RS08800 -1.6 -2.4 peptidase T compare
HGI48_RS17890 -1.6 -3.1 carboxylating nicotinate-nucleotide diphosphorylase compare
HGI48_RS03715 -1.5 -2.3 hypothetical protein compare
HGI48_RS10165 -1.5 -5.4 glucose-6-phosphate dehydrogenase compare
HGI48_RS00790 -1.5 -1.4 protein-export chaperone SecB compare
HGI48_RS01300 -1.5 -2.2 50S ribosomal protein L11 methyltransferase compare
HGI48_RS13620 -1.5 -2.2 protein DsrB compare
HGI48_RS20070 -1.5 -3.8 class I adenylate cyclase compare
HGI48_RS13210 -1.5 -2.2 23S rRNA accumulation protein YceD compare
HGI48_RS20045 -1.4 -1.9 tyrosine recombinase XerC compare
HGI48_RS17035 -1.4 -1.7 7-carboxy-7-deazaguanine synthase QueE compare
HGI48_RS13235 -1.4 -4.4 dihydroorotase compare
HGI48_RS15615 -1.4 -1.9 Fe-S cluster assembly protein IscX compare
HGI48_RS13390 -1.4 -5.7 flagellar filament capping protein FliD compare
HGI48_RS17565 -1.4 -3.2 alanine racemase compare
HGI48_RS11310 -1.4 -7.2 TerC family protein compare
HGI48_RS06650 -1.4 -2.1 multidrug efflux pump-associated protein, AcrZ family compare
HGI48_RS17355 -1.4 -2.0 YggT family protein compare
HGI48_RS08295 -1.4 -1.6 IS481 family transposase compare
HGI48_RS05560 -1.4 -1.7 transcriptional regulator NrdR compare
HGI48_RS01410 -1.4 -1.1 ribosome-associated protein compare
HGI48_RS04730 -1.4 -2.8 hypothetical protein compare
HGI48_RS03475 -1.4 -2.2 winged helix-turn-helix transcriptional regulator compare
HGI48_RS13545 -1.4 -2.1 flagellar protein FlhE compare
HGI48_RS13275 -1.4 -7.5 glucans biosynthesis glucosyltransferase MdoH compare
HGI48_RS17750 -1.4 -2.0 ABC transporter ATP-binding protein compare
HGI48_RS18560 -1.4 -2.2 N-acetylmuramoyl-L-alanine amidase AmiB compare
HGI48_RS10465 -1.4 -5.7 tryptophan synthase subunit beta compare
HGI48_RS13395 -1.4 -2.4 flagellar export chaperone FliS compare
HGI48_RS06070 -1.3 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
HGI48_RS15750 -1.3 -7.3 phosphoribosylformylglycinamidine synthase compare
HGI48_RS08555 -1.3 -1.0 helix-turn-helix domain-containing protein compare
HGI48_RS06440 -1.3 -1.2 YbfA family protein compare
HGI48_RS12980 -1.3 -1.7 hypothetical protein compare
HGI48_RS05075 -1.3 -2.7 SecY-interacting protein compare
HGI48_RS14405 -1.3 -6.2 amidophosphoribosyltransferase compare
HGI48_RS07980 -1.3 -2.3 type VI secretion system baseplate subunit TssK compare
HGI48_RS12130 -1.3 -1.7 tail protein X compare
HGI48_RS07215 -1.3 -2.4 DUF736 domain-containing protein compare
HGI48_RS11145 -1.3 -1.6 hypothetical protein compare
HGI48_RS21235 -1.3 -5.2 nitrogen regulation protein NR(I) compare
HGI48_RS15295 -1.3 -1.6 DNA helicase IV compare
HGI48_RS12430 -1.3 -2.1 thiol peroxidase compare
HGI48_RS07750 -1.3 -2.6 ABC transporter ATP-binding protein compare
HGI48_RS05795 -1.3 -4.1 efflux RND transporter periplasmic adaptor subunit compare
HGI48_RS17225 -1.3 -3.9 HlyC/CorC family transporter compare
HGI48_RS05790 -1.3 -6.1 multidrug efflux RND transporter permease subunit compare
HGI48_RS10995 -1.3 -1.3 IS21 family transposase compare
HGI48_RS05200 -1.3 -2.5 VOC family protein compare
HGI48_RS09835 -1.2 -3.3 DUF496 family protein compare
HGI48_RS18400 -1.2 -2.6 phosphoglycerate dehydrogenase compare
HGI48_RS10435 -1.2 -2.5 acyl-CoA thioester hydrolase YciA compare
HGI48_RS06545 -1.2 -2.0 Tol-Pal system protein TolQ compare
HGI48_RS04565 -1.2 -3.9 ribonuclease Z compare
HGI48_RS01210 -1.2 -4.1 phosphoribosylamine--glycine ligase compare
HGI48_RS10090 -1.2 -1.0 dihydroneopterin triphosphate diphosphatase compare
HGI48_RS03190 -1.2 -1.8 ribosome assembly RNA-binding protein YhbY compare
HGI48_RS14260 -1.2 -0.9 NADH-quinone oxidoreductase subunit L compare
HGI48_RS01050 -1.2 -1.1 tRNA-Thr compare
HGI48_RS04970 -1.2 -1.9 thymidylate synthase compare
HGI48_RS15530 -1.2 -1.3 glutamine-hydrolyzing GMP synthase compare
HGI48_RS11325 -1.2 -2.5 PTS mannose transporter subunit IID compare
HGI48_RS12735 -1.2 -3.1 electron transporter RnfD compare
HGI48_RS08365 -1.2 -2.5 DNA sulfur modification protein DndE compare
HGI48_RS02580 -1.2 -1.9 Cd(II)/Pb(II)-responsive transcriptional regulator compare
HGI48_RS03685 -1.2 -1.1 GNAT family N-acetyltransferase compare
HGI48_RS17930 -1.2 -1.3 8-oxo-dGTP diphosphatase MutT compare
HGI48_RS20250 -1.2 -0.9 peptidylprolyl isomerase compare
HGI48_RS17005 -1.2 -1.6 phosphoadenylyl-sulfate reductase compare
HGI48_RS07115 -1.1 -1.1 EexN family lipoprotein compare
HGI48_RS21205 -1.1 -2.3 fatty acid biosynthesis protein FabY compare
HGI48_RS11245 -1.1 -2.6 septum site-determining protein MinD compare
HGI48_RS11840 -1.1 -2.1 ABC transporter permease compare
HGI48_RS10460 -1.1 -3.0 tryptophan synthase subunit alpha compare
HGI48_RS19750 -1.1 -1.8 two-component system response regulator OmpR compare
HGI48_RS10480 -1.1 -2.0 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
HGI48_RS05525 -1.1 -4.8 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
HGI48_RS08580 -1.1 -2.0 type VI secretion system tip protein VgrG compare
HGI48_RS07650 -1.1 -1.0 hypothetical protein compare
HGI48_RS05650 -1.1 -1.1 cytochrome o ubiquinol oxidase subunit III compare
HGI48_RS15430 -1.1 -2.4 amino acid ABC transporter ATP-binding protein compare
HGI48_RS14280 -1.1 -1.1 NADH-quinone oxidoreductase subunit NuoH compare
HGI48_RS18210 -1.1 -1.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
HGI48_RS02075 -1.1 -1.0 hypothetical protein compare
HGI48_RS10975 -1.1 -2.3 redox-regulated ATPase YchF compare
HGI48_RS14525 -1.1 -1.5 penicillin-insensitive murein endopeptidase compare
HGI48_RS18065 -1.1 -3.1 3-isopropylmalate dehydratase large subunit compare
HGI48_RS20970 -1.1 -1.9 heat shock chaperone IbpA compare
HGI48_RS18075 -1.1 -1.1 siderophore-interacting protein compare
HGI48_RS14435 -1.1 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
HGI48_RS15010 -1.1 -5.5 beta-galactosidase compare
HGI48_RS02770 -1.1 -2.1 phage holin family protein compare
HGI48_RS12005 -1.1 -2.2 nitrate reductase molybdenum cofactor assembly chaperone compare
HGI48_RS11945 -1.0 -1.7 type II toxin-antitoxin system death-on-curing family toxin compare
HGI48_RS15190 -1.0 -2.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
HGI48_RS13120 -1.0 -1.7 phosphotransferase compare
HGI48_RS02790 -1.0 -3.3 transcriptional regulator ExuR compare
HGI48_RS06805 -1.0 -2.6 hypothetical protein compare
HGI48_RS07860 -1.0 -1.1 malonate decarboxylase subunit epsilon compare
HGI48_RS08150 -1.0 -1.8 flavin reductase family protein compare
HGI48_RS15865 -1.0 -5.3 ATP-dependent RNA helicase SrmB compare
HGI48_RS01715 -1.0 -3.1 tol-pal system-associated acyl-CoA thioesterase compare
HGI48_RS01445 -1.0 -1.4 RNA polymerase factor sigma-54 compare
HGI48_RS12055 -1.0 -2.1 carboxy terminal-processing peptidase compare
HGI48_RS17940 -1.0 -2.4 secA regulator SecM compare
HGI48_RS02775 -1.0 -0.9 DUF883 domain-containing protein compare
HGI48_RS06065 -1.0 -2.6 phosphoribosylglycinamide formyltransferase compare
HGI48_RS03510 -1.0 -6.2 polysaccharide biosynthesis protein compare
HGI48_RS00870 -1.0 -2.4 acetylornithine deacetylase compare
HGI48_RS08625 -1.0 -3.8 glycosyltransferase compare
HGI48_RS10470 -1.0 -4.1 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
HGI48_RS17485 -1.0 -3.0 diaminopimelate decarboxylase compare
HGI48_RS20230 -1.0 -3.9 exopolyphosphatase compare
HGI48_RS09155 -1.0 -3.0 DUF3413 domain-containing protein compare
HGI48_RS17305 -1.0 -1.0 hypothetical protein compare
HGI48_RS00700 -1.0 -1.5 DNA repair protein RadC compare
HGI48_RS16690 -1.0 -1.6 methylthioribulose 1-phosphate dehydratase compare
HGI48_RS14575 -1.0 -3.6 phospholipid-binding lipoprotein MlaA compare
HGI48_RS20190 -1.0 -1.3 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
HGI48_RS10390 -1.0 -2.8 oligopeptide ABC transporter permease OppC compare
HGI48_RS09810 -1.0 -1.9 citrate lyase holo-[acyl-carrier protein] synthase compare
HGI48_RS06550 -1.0 -1.2 colicin uptake protein TolR compare
HGI48_RS10530 -1.0 -2.2 YciN family protein compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola 67-19 in plant experiments

For plant cv.Atlantic across organisms