Experiment setATCH181 for Dickeya dianthicola ME23

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
DZA65_RS05310 -4.3 -8.3 thymidylate synthase compare
DZA65_RS21090 -3.9 -2.6 tyrosine recombinase XerC compare
DZA65_RS06895 -3.5 -6.5 Tol-Pal system protein TolQ compare
DZA65_RS16090 -3.0 -2.8 sulfurtransferase TusE compare
DZA65_RS00800 -2.8 -4.1 O-antigen ligase family protein compare
DZA65_RS10905 -2.6 -7.8 TonB system transport protein TonB compare
DZA65_RS16610 -2.6 -13.9 IMP dehydrogenase compare
DZA65_RS18160 -2.5 -3.2 glycerate kinase compare
DZA65_RS13750 -2.5 -14.1 glucans biosynthesis glucosyltransferase MdoH compare
DZA65_RS06115 -2.4 -18.5 multidrug efflux RND transporter permease subunit compare
DZA65_RS00790 -2.4 -3.0 glycosyltransferase family 4 protein compare
DZA65_RS02490 -2.3 -9.9 phosphoserine phosphatase compare
DZA65_RS15990 -2.3 -4.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
DZA65_RS19350 -2.3 -4.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
DZA65_RS21420 -2.3 -14.5 glutamate racemase compare
DZA65_RS19540 -2.3 -7.7 phosphoglycerate dehydrogenase compare
DZA65_RS11865 -2.1 -5.7 tRNA 2-thiouridine(34) synthase MnmA compare
DZA65_RS05500 -2.1 -5.2 molecular chaperone Skp compare
DZA65_RS12505 -2.1 -7.4 carboxy terminal-processing peptidase compare
DZA65_RS06120 -2.0 -11.5 efflux RND transporter periplasmic adaptor subunit compare
DZA65_RS13755 -2.0 -8.2 glucan biosynthesis protein G compare
DZA65_RS06470 -1.9 -7.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DZA65_RS11720 -1.9 -7.0 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DZA65_RS19655 -1.9 -2.6 adenylosuccinate synthase compare
DZA65_RS16710 -1.9 -2.7 iron-sulfur cluster assembly protein IscA compare
DZA65_RS13710 -1.8 -10.8 dihydroorotase compare
DZA65_RS03635 -1.8 -5.8 sugar transferase compare
DZA65_RS03625 -1.8 -13.3 polysaccharide biosynthesis protein compare
DZA65_RS13390 -1.8 -9.4 quinone-dependent dihydroorotate dehydrogenase compare
DZA65_RS10915 -1.8 -6.5 septation protein A compare
DZA65_RS09910 -1.7 -4.7 thioredoxin-disulfide reductase compare
DZA65_RS19740 -1.7 -7.7 ABC transporter ATP-binding protein compare
DZA65_RS19735 -1.7 -4.4 ABC transporter permease compare
DZA65_RS06420 -1.7 -9.8 phosphoribosylformylglycinamidine cyclo-ligase compare
DZA65_RS01260 -1.7 -11.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DZA65_RS10585 -1.6 -5.2 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DZA65_RS09455 -1.6 -4.3 DUF3413 domain-containing protein compare
DZA65_RS18650 -1.6 -4.7 alanine racemase compare
DZA65_RS13030 -1.6 -8.8 orotidine-5'-phosphate decarboxylase compare
DZA65_RS16830 -1.6 -13.2 phosphoribosylformylglycinamidine synthase compare
DZA65_RS19290 -1.6 -2.7 hypothetical protein compare
DZA65_RS00735 -1.6 -6.5 orotate phosphoribosyltransferase compare
DZA65_RS21790 -1.5 -1.7 sulfurtransferase TusA compare
DZA65_RS15520 -1.5 -8.7 tRNA-Arg compare
DZA65_RS19745 -1.5 -7.3 GDP-L-fucose synthase compare
DZA65_RS03260 -1.5 -4.6 lipoprotein NlpI compare
DZA65_RS19380 -1.5 -9.9 carbamoyl-phosphate synthase large subunit compare
DZA65_RS14145 -1.4 -3.4 hypothetical protein compare
DZA65_RS10810 -1.4 -7.6 formyltetrahydrofolate deformylase compare
DZA65_RS07125 -1.4 -8.9 dTDP-4-dehydrorhamnose reductase compare
DZA65_RS00810 -1.4 -3.1 putative lipopolysaccharide heptosyltransferase III compare
DZA65_RS20550 -1.4 -2.9 sulfurtransferase complex subunit TusC compare
DZA65_RS18320 -1.4 -5.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
DZA65_RS15995 -1.3 -6.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
DZA65_RS10485 -1.3 -4.8 membrane protein compare
DZA65_RS22005 -1.3 -8.1 inorganic phosphate transporter PitA compare
DZA65_RS06020 -1.3 -7.0 endopeptidase La compare
DZA65_RS03670 -1.3 -4.5 kdo(2)-lipid IV(A) palmitoleoyltransferase compare
DZA65_RS19385 -1.3 -7.4 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DZA65_RS20545 -1.3 -2.5 sulfurtransferase complex subunit TusB compare
DZA65_RS02945 -1.2 -2.9 transcriptional regulator ExuR compare
DZA65_RS22145 -1.2 -2.2 DNA-directed RNA polymerase subunit omega compare
DZA65_RS00365 -1.2 -6.9 DMT family transporter compare
DZA65_RS15515 -1.2 -6.7 phospholipid-binding lipoprotein MlaA compare
DZA65_RS01920 -1.2 -3.7 DUF1311 domain-containing protein compare
DZA65_RS21265 -1.2 -3.0 thioredoxin TrxA compare
DZA65_RS06990 -1.2 -8.3 UDP-glucose 4-epimerase GalE compare
DZA65_RS01560 -1.2 -7.1 phospholipid-binding protein MlaC compare
DZA65_RS21075 -1.2 -3.4 magnesium/cobalt transporter CorA compare
DZA65_RS00795 -1.2 -5.5 glycosyltransferase family 9 protein compare
DZA65_RS05240 -1.2 -3.9 oxidative damage protection protein compare
DZA65_RS01970 -1.1 -7.9 aspartate carbamoyltransferase compare
DZA65_RS13330 -1.1 -6.0 AI-2E family transporter YdiK compare
DZA65_RS19730 -1.1 -8.2 GDP-mannose 4,6-dehydratase compare
DZA65_RS19685 -1.1 -1.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
DZA65_RS01550 -1.1 -3.9 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
DZA65_RS04230 -1.1 -6.1 outer membrane protein assembly factor BamE compare
DZA65_RS19210 -1.1 -7.3 3-isopropylmalate dehydratase large subunit compare
DZA65_RS02505 -1.1 -2.5 peptide chain release factor 3 compare
DZA65_RS07120 -1.1 -2.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
DZA65_RS01255 -1.1 -6.8 phosphoribosylamine--glycine ligase compare
DZA65_RS04355 -1.1 -6.4 phosphoenolpyruvate-protein phosphotransferase PtsI compare
DZA65_RS19750 -1.0 -5.6 hypothetical protein compare
DZA65_RS05975 -1.0 -1.7 cytochrome o ubiquinol oxidase subunit III compare
DZA65_RS15335 -1.0 -8.2 amidophosphoribosyltransferase compare
DZA65_RS06860 -1.0 -4.9 succinate--CoA ligase subunit alpha compare
DZA65_RS21825 -1.0 -7.8 sugar kinase compare
DZA65_RS22240 -1.0 -6.3 thiol:disulfide interchange protein DsbA compare
DZA65_RS01790 -1.0 -6.8 tol-pal system-associated acyl-CoA thioesterase compare
DZA65_RS16425 -1.0 -3.0 hypothetical protein compare
DZA65_RS01615 -1.0 -6.0 stringent starvation protein A compare
DZA65_RS19205 -1.0 -7.3 3-isopropylmalate dehydrogenase compare
DZA65_RS16960 -1.0 -2.9 tRNA-Ala compare
DZA65_RS11395 -1.0 -2.1 peptide chain release factor N(5)-glutamine methyltransferase compare
DZA65_RS03210 -1.0 -1.5 preprotein translocase subunit SecG compare
DZA65_RS22965 -1.0 -2.1 hypothetical protein compare
DZA65_RS16705 -1.0 -3.0 co-chaperone HscB compare
DZA65_RS18550 -0.9 -5.9 diaminopimelate decarboxylase compare
DZA65_RS19725 -0.9 -7.8 phosphomannomutase/phosphoglucomutase compare
DZA65_RS22985 -0.9 -1.9 hypothetical protein compare
DZA65_RS13880 -0.9 -3.2 flagellar export chaperone FliS compare
DZA65_RS11020 -0.9 -5.1 HTH-type transcriptional regulator CysB compare
DZA65_RS01545 -0.9 -3.2 phospholipid ABC transporter ATP-binding protein MlaF compare
DZA65_RS20560 -0.9 -3.2 transcriptional regulator compare
DZA65_RS11435 -0.9 -3.1 redox-regulated ATPase YchF compare
DZA65_RS19175 -0.9 -5.4 catabolite repressor/activator compare
DZA65_RS20805 -0.9 -0.9 intracellular growth attenuator family protein compare
DZA65_RS11715 -0.9 -5.9 5-dehydro-4-deoxy-D-glucuronate isomerase compare
DZA65_RS12875 -0.9 -3.4 thiol peroxidase compare
DZA65_RS17985 -0.9 -1.8 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
DZA65_RS16925 -0.9 -1.9 anti-sigma-E factor RseA compare
DZA65_RS13645 -0.9 -3.5 beta-ketoacyl-ACP synthase II compare
DZA65_RS22195 -0.9 -4.7 ribosome-dependent GTPase TypA compare
DZA65_RS06900 -0.9 -0.8 colicin uptake protein TolR compare
DZA65_RS19160 -0.9 -2.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
DZA65_RS10940 -0.9 -4.4 tryptophan synthase subunit alpha compare
DZA65_RS01510 -0.9 -3.8 RNA polymerase factor sigma-54 compare
DZA65_RS18215 -0.9 -1.8 hypothetical protein compare
DZA65_RS18020 -0.8 -5.5 RNA polymerase sigma factor RpoS compare
DZA65_RS10945 -0.8 -5.1 tryptophan synthase subunit beta compare
DZA65_RS22210 -0.8 -5.2 nitrogen regulation protein NR(I) compare
DZA65_RS11390 -0.8 -3.9 tetratricopeptide repeat-containing protein compare
DZA65_RS11120 -0.8 -4.8 mannose-6-phosphate isomerase compare
DZA65_RS10505 -0.8 -2.1 dihydroneopterin triphosphate diphosphatase compare
DZA65_RS21270 -0.8 -6.6 ATP-dependent RNA helicase RhlB compare
DZA65_RS16635 -0.8 -1.4 outer membrane protein assembly factor BamB compare
DZA65_RS01405 -0.8 -6.9 RNase E specificity factor CsrD compare
DZA65_RS02800 -0.8 -3.2 helix-turn-helix transcriptional regulator compare
DZA65_RS06885 -0.8 -2.4 cyd operon protein YbgE compare
DZA65_RS18080 -0.8 -2.5 phosphoadenylyl-sulfate reductase compare
DZA65_RS13040 -0.8 -2.7 LapA family protein compare
DZA65_RS06185 -0.8 -4.5 Kef family K(+) transporter compare
DZA65_RS19215 -0.8 -2.7 3-isopropylmalate dehydratase small subunit compare
DZA65_RS03525 -0.8 -1.4 hypothetical protein compare
DZA65_RS21590 -0.8 -2.4 DNA mismatch repair protein MutT compare
DZA65_RS07460 -0.8 -3.6 SDR family oxidoreductase compare
DZA65_RS22360 -0.8 -6.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
DZA65_RS21275 -0.8 -4.5 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
DZA65_RS19720 -0.8 -5.8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
DZA65_RS13875 -0.8 -5.0 flagellar filament capping protein FliD compare
DZA65_RS10950 -0.8 -4.8 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
DZA65_RS13435 -0.8 -5.7 porin compare
DZA65_RS18920 -0.7 -2.7 D-threonate 4-phosphate dehydrogenase compare
DZA65_RS10030 -0.7 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
DZA65_RS19200 -0.7 -5.9 2-isopropylmalate synthase compare
DZA65_RS22695 -0.7 -3.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
DZA65_RS00360 -0.7 -3.2 MarR family transcriptional regulator compare
DZA65_RS21615 -0.7 -2.0 envelope stress sensor histidine kinase CpxA compare
DZA65_RS01530 -0.7 -5.4 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
DZA65_RS11925 -0.7 -1.0 DNA-damage-inducible protein J compare
DZA65_RS21445 -0.7 -2.8 Si-specific NAD(P)(+) transhydrogenase compare
DZA65_RS05860 -0.7 -2.1 preprotein translocase subunit YajC compare
DZA65_RS21080 -0.7 -4.1 DNA helicase II compare
DZA65_RS15370 -0.7 -3.2 tRNA pseudouridine(38-40) synthase TruA compare
DZA65_RS14415 -0.7 -1.2 IS4 family transposase compare
DZA65_RS21860 -0.7 -1.8 cellulose synthase compare
DZA65_RS01795 -0.7 -2.8 TonB system transport protein ExbD compare
DZA65_RS10965 -0.7 -4.6 anthranilate synthase component 1 compare
DZA65_RS03495 -0.7 -3.5 single-stranded-DNA-specific exonuclease RecJ compare
DZA65_RS09370 -0.7 -2.3 short-chain dehydrogenase compare
DZA65_RS16110 -0.7 -2.6 DUF2057 family protein compare
DZA65_RS13085 -0.7 -2.4 pyridoxamine 5'-phosphate oxidase compare
DZA65_RS12995 -0.7 -3.6 exoribonuclease II compare
DZA65_RS20875 -0.7 -1.4 Fe-S biogenesis protein NfuA compare
DZA65_RS16715 -0.7 -0.8 Fe-S cluster assembly scaffold IscU compare
DZA65_RS10045 -0.7 -3.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
DZA65_RS18200 -0.7 -1.5 hypothetical protein compare
DZA65_RS13570 -0.7 -2.7 glycine zipper 2TM domain-containing protein compare
DZA65_RS04700 -0.7 -1.3 transposase compare
DZA65_RS08125 -0.7 -3.5 iron ABC transporter permease compare
DZA65_RS15550 -0.7 -2.9 Fe(3+)-siderophore ABC transporter permease compare
DZA65_RS10555 -0.6 -0.7 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
DZA65_RS07390 -0.6 -2.7 ATP-dependent helicase compare
DZA65_RS15755 -0.6 -2.4 PTS transporter subunit EIIB compare
DZA65_RS15580 -0.6 -3.4 enterochelin esterase compare
DZA65_RS21115 -0.6 -3.4 class I adenylate cyclase compare
DZA65_RS00900 -0.6 -2.7 ATP-binding cassette domain-containing protein compare
DZA65_RS02245 -0.6 -1.3 transketolase compare
DZA65_RS18270 -0.6 -2.0 glycerol-3-phosphate 1-O-acyltransferase PlsY compare
DZA65_RS05490 -0.6 -4.1 sigma E protease regulator RseP compare
DZA65_RS05935 -0.6 -2.0 protein deglycase YajL compare
DZA65_RS02300 -0.6 -1.3 type-1Ba cytolytic delta-endotoxin compare
DZA65_RS06625 -0.6 -3.6 CNNM family magnesium/cobalt transport protein CorC compare
DZA65_RS19755 -0.6 -3.0 glycosyltransferase compare
DZA65_RS01555 -0.6 -4.5 outer membrane lipid asymmetry maintenance protein MlaD compare
DZA65_RS09395 -0.6 -1.8 plasmid stabilization protein compare
DZA65_RS06985 -0.6 -3.2 galactose-1-phosphate uridylyltransferase compare
DZA65_RS01005 -0.6 -1.7 NAD(P)H-flavin reductase compare
DZA65_RS04625 -0.6 -1.6 IS4 family transposase compare
DZA65_RS07680 -0.6 -2.3 transcriptional regulator compare
DZA65_RS22735 -0.6 -1.1 hypothetical protein compare
DZA65_RS13670 -0.6 -2.7 phosphate acyltransferase PlsX compare
DZA65_RS20220 -0.6 -3.9 glucose-6-phosphate isomerase compare
DZA65_RS19475 -0.6 -2.5 threonine synthase compare
DZA65_RS11210 -0.6 -0.9 TetR family transcriptional regulator compare
DZA65_RS18915 -0.6 -2.1 DeoR/GlpR transcriptional regulator compare
DZA65_RS20555 -0.6 -1.1 sulfurtransferase complex subunit TusD compare
DZA65_RS08905 -0.6 -2.2 YqaE/Pmp3 family membrane protein compare
DZA65_RS11915 -0.6 -1.0 ferrous iron transport protein A compare
DZA65_RS20195 -0.6 -2.1 fumarate reductase subunit FrdD compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola ME23 in plant experiments

For plant cv.Norland across organisms