Experiment setATCH179 for Dickeya dianthicola ME23

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
DZA65_RS21090 -3.6 -2.5 tyrosine recombinase XerC compare
DZA65_RS16090 -3.5 -2.4 sulfurtransferase TusE compare
DZA65_RS19655 -3.4 -3.5 adenylosuccinate synthase compare
DZA65_RS05310 -3.4 -8.9 thymidylate synthase compare
DZA65_RS06895 -3.2 -6.6 Tol-Pal system protein TolQ compare
DZA65_RS10905 -2.7 -7.2 TonB system transport protein TonB compare
DZA65_RS10585 -2.6 -7.5 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DZA65_RS11865 -2.5 -5.8 tRNA 2-thiouridine(34) synthase MnmA compare
DZA65_RS11720 -2.5 -7.6 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DZA65_RS21790 -2.5 -3.6 sulfurtransferase TusA compare
DZA65_RS18160 -2.4 -1.6 glycerate kinase compare
DZA65_RS00790 -2.4 -3.2 glycosyltransferase family 4 protein compare
DZA65_RS03230 -2.4 -2.2 transcription termination/antitermination protein NusA compare
DZA65_RS13750 -2.3 -13.0 glucans biosynthesis glucosyltransferase MdoH compare
DZA65_RS21420 -2.3 -14.8 glutamate racemase compare
DZA65_RS00800 -2.2 -6.6 O-antigen ligase family protein compare
DZA65_RS16610 -2.1 -9.9 IMP dehydrogenase compare
DZA65_RS19290 -2.1 -3.1 hypothetical protein compare
DZA65_RS15995 -2.1 -8.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
DZA65_RS07120 -2.1 -3.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
DZA65_RS01350 -2.1 -2.7 DNA-binding transcriptional regulator Fis compare
DZA65_RS10555 -2.1 -1.7 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
DZA65_RS20550 -2.1 -3.1 sulfurtransferase complex subunit TusC compare
DZA65_RS12505 -2.0 -7.3 carboxy terminal-processing peptidase compare
DZA65_RS13710 -2.0 -10.0 dihydroorotase compare
DZA65_RS01260 -2.0 -12.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DZA65_RS10915 -2.0 -6.4 septation protein A compare
DZA65_RS02490 -2.0 -8.6 phosphoserine phosphatase compare
DZA65_RS18650 -1.9 -4.3 alanine racemase compare
DZA65_RS13755 -1.9 -6.2 glucan biosynthesis protein G compare
DZA65_RS06420 -1.8 -10.2 phosphoribosylformylglycinamidine cyclo-ligase compare
DZA65_RS16830 -1.8 -14.5 phosphoribosylformylglycinamidine synthase compare
DZA65_RS06470 -1.8 -7.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DZA65_RS15990 -1.8 -3.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
DZA65_RS20805 -1.8 -1.4 intracellular growth attenuator family protein compare
DZA65_RS15335 -1.7 -10.8 amidophosphoribosyltransferase compare
DZA65_RS09455 -1.7 -3.6 DUF3413 domain-containing protein compare
DZA65_RS09990 -1.7 -3.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
DZA65_RS19475 -1.6 -4.6 threonine synthase compare
DZA65_RS22225 -1.6 -2.3 Der GTPase-activating protein YihI compare
DZA65_RS03635 -1.6 -6.5 sugar transferase compare
DZA65_RS13390 -1.6 -7.5 quinone-dependent dihydroorotate dehydrogenase compare
DZA65_RS03260 -1.6 -5.0 lipoprotein NlpI compare
DZA65_RS19350 -1.6 -3.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
DZA65_RS01255 -1.6 -8.9 phosphoribosylamine--glycine ligase compare
DZA65_RS19540 -1.5 -6.3 phosphoglycerate dehydrogenase compare
DZA65_RS22005 -1.5 -8.3 inorganic phosphate transporter PitA compare
DZA65_RS20555 -1.5 -2.1 sulfurtransferase complex subunit TusD compare
DZA65_RS13085 -1.4 -4.6 pyridoxamine 5'-phosphate oxidase compare
DZA65_RS13030 -1.4 -7.0 orotidine-5'-phosphate decarboxylase compare
DZA65_RS09570 -1.4 -4.1 1-phosphofructokinase compare
DZA65_RS19665 -1.4 -3.1 protease modulator HflC compare
DZA65_RS19380 -1.4 -9.5 carbamoyl-phosphate synthase large subunit compare
DZA65_RS22195 -1.3 -7.2 ribosome-dependent GTPase TypA compare
DZA65_RS13040 -1.3 -3.2 LapA family protein compare
DZA65_RS00735 -1.3 -5.5 orotate phosphoribosyltransferase compare
DZA65_RS01970 -1.3 -8.2 aspartate carbamoyltransferase compare
DZA65_RS14515 -1.3 -2.3 transposase compare
DZA65_RS19210 -1.3 -7.4 3-isopropylmalate dehydratase large subunit compare
DZA65_RS01790 -1.2 -8.0 tol-pal system-associated acyl-CoA thioesterase compare
DZA65_RS10030 -1.2 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
DZA65_RS16715 -1.2 -1.1 Fe-S cluster assembly scaffold IscU compare
DZA65_RS03670 -1.2 -3.9 kdo(2)-lipid IV(A) palmitoleoyltransferase compare
DZA65_RS18550 -1.2 -7.2 diaminopimelate decarboxylase compare
DZA65_RS22735 -1.2 -2.2 hypothetical protein compare
DZA65_RS00365 -1.2 -6.8 DMT family transporter compare
DZA65_RS06990 -1.2 -7.7 UDP-glucose 4-epimerase GalE compare
DZA65_RS21825 -1.2 -8.9 sugar kinase compare
DZA65_RS12945 -1.2 -2.9 phage shock protein PspA compare
DZA65_RS05500 -1.2 -3.1 molecular chaperone Skp compare
DZA65_RS10810 -1.2 -6.5 formyltetrahydrofolate deformylase compare
DZA65_RS19385 -1.2 -6.9 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DZA65_RS20545 -1.1 -2.4 sulfurtransferase complex subunit TusB compare
DZA65_RS21075 -1.1 -3.4 magnesium/cobalt transporter CorA compare
DZA65_RS15555 -1.1 -5.7 iron-enterobactin ABC transporter permease compare
DZA65_RS10600 -1.1 -3.7 DNA polymerase III subunit theta compare
DZA65_RS15280 -1.1 -4.4 acetate kinase compare
DZA65_RS04355 -1.1 -6.6 phosphoenolpyruvate-protein phosphotransferase PtsI compare
DZA65_RS06820 -1.1 -2.5 citrate synthase compare
DZA65_RS15370 -1.1 -3.7 tRNA pseudouridine(38-40) synthase TruA compare
DZA65_RS22210 -1.1 -6.5 nitrogen regulation protein NR(I) compare
DZA65_RS21270 -1.0 -8.2 ATP-dependent RNA helicase RhlB compare
DZA65_RS18215 -1.0 -1.6 hypothetical protein compare
DZA65_RS00810 -1.0 -2.6 putative lipopolysaccharide heptosyltransferase III compare
DZA65_RS22965 -1.0 -1.4 hypothetical protein compare
DZA65_RS11435 -1.0 -3.3 redox-regulated ATPase YchF compare
DZA65_RS02945 -1.0 -2.2 transcriptional regulator ExuR compare
DZA65_RS22360 -1.0 -7.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
DZA65_RS05445 -1.0 -6.0 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
DZA65_RS00970 -1.0 -3.0 twin-arginine translocase subunit TatA compare
DZA65_RS11395 -1.0 -2.1 peptide chain release factor N(5)-glutamine methyltransferase compare
DZA65_RS21115 -1.0 -4.3 class I adenylate cyclase compare
DZA65_RS13880 -1.0 -3.8 flagellar export chaperone FliS compare
DZA65_RS14735 -1.0 -3.2 NAD(P)H-dependent oxidoreductase compare
DZA65_RS10485 -1.0 -3.4 membrane protein compare
DZA65_RS01510 -1.0 -3.2 RNA polymerase factor sigma-54 compare
DZA65_RS04230 -1.0 -5.2 outer membrane protein assembly factor BamE compare
DZA65_RS19215 -0.9 -2.7 3-isopropylmalate dehydratase small subunit compare
DZA65_RS15285 -0.9 -3.6 phosphate acetyltransferase compare
DZA65_RS19200 -0.9 -7.4 2-isopropylmalate synthase compare
DZA65_RS02300 -0.9 -1.6 type-1Ba cytolytic delta-endotoxin compare
DZA65_RS03255 -0.9 -1.3 polyribonucleotide nucleotidyltransferase compare
DZA65_RS11715 -0.9 -6.2 5-dehydro-4-deoxy-D-glucuronate isomerase compare
DZA65_RS05855 -0.9 -4.3 tRNA guanosine(34) transglycosylase Tgt compare
DZA65_RS12660 -0.9 -2.1 phage tail assembly protein compare
DZA65_RS19205 -0.9 -6.2 3-isopropylmalate dehydrogenase compare
DZA65_RS15550 -0.9 -4.6 Fe(3+)-siderophore ABC transporter permease compare
DZA65_RS15520 -0.9 -4.9 tRNA-Arg compare
DZA65_RS11020 -0.9 -5.4 HTH-type transcriptional regulator CysB compare
DZA65_RS18600 -0.9 -1.6 DUF1330 domain-containing protein compare
DZA65_RS02505 -0.9 -2.3 peptide chain release factor 3 compare
DZA65_RS01920 -0.8 -2.3 DUF1311 domain-containing protein compare
DZA65_RS05860 -0.8 -2.0 preprotein translocase subunit YajC compare
DZA65_RS05985 -0.8 -2.9 cytochrome o ubiquinol oxidase subunit II compare
DZA65_RS00360 -0.8 -4.2 MarR family transcriptional regulator compare
DZA65_RS10580 -0.8 -5.1 glucose-6-phosphate dehydrogenase compare
DZA65_RS12020 -0.8 -3.2 ribonuclease toxin immunity protein CdiI compare
DZA65_RS22695 -0.8 -4.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
DZA65_RS22705 -0.8 -2.8 membrane protein insertion efficiency factor YidD compare
DZA65_RS13125 -0.8 -2.8 Grx4 family monothiol glutaredoxin compare
DZA65_RS13645 -0.8 -3.4 beta-ketoacyl-ACP synthase II compare
DZA65_RS21445 -0.8 -2.7 Si-specific NAD(P)(+) transhydrogenase compare
DZA65_RS01795 -0.8 -3.1 TonB system transport protein ExbD compare
DZA65_RS04215 -0.8 -1.8 SsrA-binding protein SmpB compare
DZA65_RS00175 -0.8 -2.6 ABC transporter permease compare
DZA65_RS05975 -0.8 -0.9 cytochrome o ubiquinol oxidase subunit III compare
DZA65_RS21275 -0.8 -3.5 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
DZA65_RS19175 -0.8 -5.3 catabolite repressor/activator compare
DZA65_RS16670 -0.8 -2.2 nucleoside-diphosphate kinase compare
DZA65_RS21110 -0.8 -2.1 iron donor protein CyaY compare
DZA65_RS11360 -0.8 -3.6 fumarate/nitrate reduction transcriptional regulator Fnr compare
DZA65_RS06185 -0.8 -3.5 Kef family K(+) transporter compare
DZA65_RS15620 -0.7 -2.1 alpha/beta hydrolase compare
DZA65_RS21510 -0.7 -5.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
DZA65_RS09910 -0.7 -2.4 thioredoxin-disulfide reductase compare
DZA65_RS19740 -0.7 -4.0 ABC transporter ATP-binding protein compare
DZA65_RS13485 -0.7 -2.5 endopeptidase compare
DZA65_RS01240 -0.7 -4.3 YjaG family protein compare
DZA65_RS00980 -0.7 -4.7 Sec-independent protein translocase subunit TatC compare
DZA65_RS19735 -0.7 -2.6 ABC transporter permease compare
DZA65_RS06080 -0.7 -2.5 glycoprotein/polysaccharide metabolism compare
DZA65_RS11655 -0.7 -5.1 TerC family protein compare
DZA65_RS13875 -0.7 -5.0 flagellar filament capping protein FliD compare
DZA65_RS10980 -0.7 -2.2 23S rRNA pseudouridine(2605) synthase RluB compare
DZA65_RS06115 -0.7 -6.2 multidrug efflux RND transporter permease subunit compare
DZA65_RS18020 -0.7 -4.8 RNA polymerase sigma factor RpoS compare
DZA65_RS15580 -0.7 -3.8 enterochelin esterase compare
DZA65_RS12245 -0.7 -1.7 type III secretion system export apparatus subunit SctS compare
DZA65_RS16910 -0.7 -3.6 elongation factor 4 compare
DZA65_RS19745 -0.7 -4.0 GDP-L-fucose synthase compare
DZA65_RS19645 -0.7 -4.8 class 1 fructose-bisphosphatase compare
DZA65_RS05295 -0.7 -1.0 RNA pyrophosphohydrolase compare
DZA65_RS08815 -0.7 -1.3 type II toxin-antitoxin system CcdA family antitoxin compare
DZA65_RS04370 -0.7 -2.9 cysteine synthase A compare
DZA65_RS07125 -0.7 -4.0 dTDP-4-dehydrorhamnose reductase compare
DZA65_RS08490 -0.7 -2.4 hypothetical protein compare
DZA65_RS20875 -0.7 -1.5 Fe-S biogenesis protein NfuA compare
DZA65_RS06840 -0.7 -3.2 succinate dehydrogenase iron-sulfur subunit compare
DZA65_RS09000 -0.7 -3.1 GTP 3',8-cyclase MoaA compare
DZA65_RS18320 -0.7 -2.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
DZA65_RS12995 -0.7 -3.4 exoribonuclease II compare
DZA65_RS06695 -0.6 -5.3 N-acetylglucosamine-6-phosphate deacetylase compare
DZA65_RS22240 -0.6 -4.2 thiol:disulfide interchange protein DsbA compare
DZA65_RS02210 -0.6 -3.2 amino acid transporter compare
DZA65_RS04295 -0.6 -2.3 transcriptional regulator compare
DZA65_RS06985 -0.6 -2.4 galactose-1-phosphate uridylyltransferase compare
DZA65_RS20185 -0.6 -3.9 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
DZA65_RS02150 -0.6 -1.3 helix-turn-helix transcriptional regulator compare
DZA65_RS01585 -0.6 -4.1 serine endoprotease DegQ compare
DZA65_RS03625 -0.6 -5.1 polysaccharide biosynthesis protein compare
DZA65_RS19345 -0.6 -4.3 Co2+/Mg2+ efflux protein ApaG compare
DZA65_RS13330 -0.6 -3.5 AI-2E family transporter YdiK compare
DZA65_RS06515 -0.6 -2.5 fluoride efflux transporter CrcB compare
DZA65_RS11175 -0.6 -2.8 DUF2384 domain-containing protein compare
DZA65_RS18555 -0.6 -2.6 LysR family transcriptional regulator compare
DZA65_RS06120 -0.6 -4.5 efflux RND transporter periplasmic adaptor subunit compare
DZA65_RS19630 -0.6 -3.5 glutathione synthase compare
DZA65_RS17195 -0.6 -2.1 hypothetical protein compare
DZA65_RS20220 -0.6 -3.3 glucose-6-phosphate isomerase compare
DZA65_RS06825 -0.6 -3.3 succinate dehydrogenase cytochrome b556 subunit compare
DZA65_RS01530 -0.6 -4.2 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
DZA65_RS02940 -0.6 -2.2 DedA family protein compare
DZA65_RS01495 -0.6 -3.2 RNase adapter RapZ compare
DZA65_RS04040 -0.6 -0.9 hypothetical protein compare
DZA65_RS00795 -0.6 -2.7 glycosyltransferase family 9 protein compare
DZA65_RS20900 -0.6 -2.6 thiosulfate sulfurtransferase GlpE compare
DZA65_RS16885 -0.6 -3.0 pyridoxine 5'-phosphate synthase compare
DZA65_RS00675 -0.6 -1.4 isoaspartyl peptidase/L-asparaginase compare
DZA65_RS15340 -0.6 -3.9 colicin V production protein compare
DZA65_RS01005 -0.6 -1.6 NAD(P)H-flavin reductase compare
DZA65_RS19195 -0.6 -2.0 leu operon leader peptide compare
DZA65_RS12595 -0.6 -2.8 baseplate assembly protein compare
DZA65_RS01560 -0.6 -3.3 phospholipid-binding protein MlaC compare
DZA65_RS15100 -0.6 -2.2 hypothetical protein compare
DZA65_RS04030 -0.6 -1.4 hypothetical protein compare
DZA65_RS01205 -0.6 -1.5 HesA/MoeB/ThiF family protein compare
DZA65_RS20235 -0.6 -3.6 DASS family sodium-coupled anion symporter compare
DZA65_RS15515 -0.6 -3.0 phospholipid-binding lipoprotein MlaA compare
DZA65_RS10505 -0.6 -1.9 dihydroneopterin triphosphate diphosphatase compare
DZA65_RS18080 -0.6 -1.7 phosphoadenylyl-sulfate reductase compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola ME23 in plant experiments

For plant cv.Norland across organisms