Experiment setATCH177 for Dickeya dianthicola ME23

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
DZA65_RS05310 -3.6 -9.4 thymidylate synthase compare
DZA65_RS19290 -3.4 -3.2 hypothetical protein compare
DZA65_RS00800 -3.0 -6.3 O-antigen ligase family protein compare
DZA65_RS00790 -2.9 -2.6 glycosyltransferase family 4 protein compare
DZA65_RS16090 -2.8 -2.6 sulfurtransferase TusE compare
DZA65_RS13755 -2.8 -8.7 glucan biosynthesis protein G compare
DZA65_RS10585 -2.7 -7.7 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DZA65_RS06895 -2.4 -6.5 Tol-Pal system protein TolQ compare
DZA65_RS13750 -2.4 -13.0 glucans biosynthesis glucosyltransferase MdoH compare
DZA65_RS21265 -2.4 -4.8 thioredoxin TrxA compare
DZA65_RS18650 -2.1 -5.0 alanine racemase compare
DZA65_RS01370 -2.1 -2.6 YhdT family protein compare
DZA65_RS02490 -2.0 -8.8 phosphoserine phosphatase compare
DZA65_RS16610 -2.0 -11.5 IMP dehydrogenase compare
DZA65_RS10485 -2.0 -5.0 membrane protein compare
DZA65_RS05500 -1.9 -4.6 molecular chaperone Skp compare
DZA65_RS20550 -1.9 -3.0 sulfurtransferase complex subunit TusC compare
DZA65_RS11720 -1.9 -6.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DZA65_RS11865 -1.9 -2.7 tRNA 2-thiouridine(34) synthase MnmA compare
DZA65_RS20805 -1.8 -1.4 intracellular growth attenuator family protein compare
DZA65_RS12505 -1.8 -6.5 carboxy terminal-processing peptidase compare
DZA65_RS16960 -1.8 -4.4 tRNA-Ala compare
DZA65_RS18160 -1.8 -2.4 glycerate kinase compare
DZA65_RS10905 -1.7 -6.5 TonB system transport protein TonB compare
DZA65_RS21420 -1.7 -11.2 glutamate racemase compare
DZA65_RS03260 -1.7 -5.6 lipoprotein NlpI compare
DZA65_RS19540 -1.7 -6.8 phosphoglycerate dehydrogenase compare
DZA65_RS10915 -1.7 -6.9 septation protein A compare
DZA65_RS07120 -1.6 -1.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
DZA65_RS06900 -1.6 -1.4 colicin uptake protein TolR compare
DZA65_RS05975 -1.6 -2.4 cytochrome o ubiquinol oxidase subunit III compare
DZA65_RS00810 -1.5 -2.3 putative lipopolysaccharide heptosyltransferase III compare
DZA65_RS10945 -1.5 -8.8 tryptophan synthase subunit beta compare
DZA65_RS15995 -1.5 -7.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
DZA65_RS22840 -1.5 -2.0 hypothetical protein compare
DZA65_RS06470 -1.4 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DZA65_RS16830 -1.4 -12.2 phosphoribosylformylglycinamidine synthase compare
DZA65_RS18320 -1.4 -5.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
DZA65_RS01260 -1.4 -9.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DZA65_RS13710 -1.4 -9.0 dihydroorotase compare
DZA65_RS04230 -1.4 -7.0 outer membrane protein assembly factor BamE compare
DZA65_RS20555 -1.4 -2.6 sulfurtransferase complex subunit TusD compare
DZA65_RS19215 -1.3 -4.3 3-isopropylmalate dehydratase small subunit compare
DZA65_RS22735 -1.3 -2.1 hypothetical protein compare
DZA65_RS12020 -1.3 -4.5 ribonuclease toxin immunity protein CdiI compare
DZA65_RS19350 -1.3 -3.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
DZA65_RS06420 -1.3 -8.3 phosphoribosylformylglycinamidine cyclo-ligase compare
DZA65_RS15370 -1.3 -4.4 tRNA pseudouridine(38-40) synthase TruA compare
DZA65_RS03635 -1.3 -5.4 sugar transferase compare
DZA65_RS22005 -1.3 -7.4 inorganic phosphate transporter PitA compare
DZA65_RS21790 -1.3 -1.5 sulfurtransferase TusA compare
DZA65_RS19685 -1.3 -2.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
DZA65_RS17595 -1.3 -3.6 hypothetical protein compare
DZA65_RS01795 -1.3 -4.7 TonB system transport protein ExbD compare
DZA65_RS06990 -1.3 -8.6 UDP-glucose 4-epimerase GalE compare
DZA65_RS10955 -1.3 -4.2 anthranilate phosphoribosyltransferase compare
DZA65_RS09395 -1.2 -3.1 plasmid stabilization protein compare
DZA65_RS03405 -1.2 -2.0 tRNA-Leu compare
DZA65_RS00740 -1.2 -2.4 nucleoid occlusion factor SlmA compare
DZA65_RS11435 -1.2 -3.5 redox-regulated ATPase YchF compare
DZA65_RS13390 -1.2 -6.2 quinone-dependent dihydroorotate dehydrogenase compare
DZA65_RS04355 -1.2 -7.0 phosphoenolpyruvate-protein phosphotransferase PtsI compare
DZA65_RS11020 -1.2 -6.1 HTH-type transcriptional regulator CysB compare
DZA65_RS11275 -1.2 -2.0 hypothetical protein compare
DZA65_RS16635 -1.1 -2.3 outer membrane protein assembly factor BamB compare
DZA65_RS09460 -1.1 -2.5 YejL family protein compare
DZA65_RS18270 -1.1 -3.2 glycerol-3-phosphate 1-O-acyltransferase PlsY compare
DZA65_RS10965 -1.1 -7.2 anthranilate synthase component 1 compare
DZA65_RS10810 -1.1 -6.3 formyltetrahydrofolate deformylase compare
DZA65_RS00795 -1.1 -5.3 glycosyltransferase family 9 protein compare
DZA65_RS19210 -1.1 -7.4 3-isopropylmalate dehydratase large subunit compare
DZA65_RS21090 -1.1 -1.2 tyrosine recombinase XerC compare
DZA65_RS19405 -1.1 -1.7 FKBP-type peptidyl-prolyl cis-trans isomerase compare
DZA65_RS11395 -1.1 -2.2 peptide chain release factor N(5)-glutamine methyltransferase compare
DZA65_RS15280 -1.1 -4.6 acetate kinase compare
DZA65_RS01255 -1.1 -6.9 phosphoribosylamine--glycine ligase compare
DZA65_RS17345 -1.1 -6.4 bifunctional chorismate mutase/prephenate dehydratase compare
DZA65_RS22360 -1.1 -8.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
DZA65_RS21270 -1.1 -8.1 ATP-dependent RNA helicase RhlB compare
DZA65_RS13645 -1.1 -3.7 beta-ketoacyl-ACP synthase II compare
DZA65_RS05885 -1.1 -3.6 transcriptional regulator NrdR compare
DZA65_RS22195 -1.1 -5.3 ribosome-dependent GTPase TypA compare
DZA65_RS00735 -1.0 -4.5 orotate phosphoribosyltransferase compare
DZA65_RS01350 -1.0 -1.9 DNA-binding transcriptional regulator Fis compare
DZA65_RS00365 -1.0 -5.6 DMT family transporter compare
DZA65_RS03670 -1.0 -3.1 kdo(2)-lipid IV(A) palmitoleoyltransferase compare
DZA65_RS17115 -1.0 -3.0 bifunctional glycosyl transferase/transpeptidase compare
DZA65_RS19735 -1.0 -3.6 ABC transporter permease compare
DZA65_RS15990 -1.0 -2.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
DZA65_RS03230 -1.0 -1.4 transcription termination/antitermination protein NusA compare
DZA65_RS17015 -1.0 -2.4 PTS lactose/cellobiose transporter subunit IIA compare
DZA65_RS21825 -1.0 -8.0 sugar kinase compare
DZA65_RS07125 -1.0 -6.5 dTDP-4-dehydrorhamnose reductase compare
DZA65_RS05985 -1.0 -2.7 cytochrome o ubiquinol oxidase subunit II compare
DZA65_RS14415 -1.0 -1.3 IS4 family transposase compare
DZA65_RS13030 -1.0 -5.6 orotidine-5'-phosphate decarboxylase compare
DZA65_RS19160 -1.0 -2.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
DZA65_RS01920 -1.0 -3.0 DUF1311 domain-containing protein compare
DZA65_RS09455 -1.0 -2.6 DUF3413 domain-containing protein compare
DZA65_RS01545 -1.0 -2.7 phospholipid ABC transporter ATP-binding protein MlaF compare
DZA65_RS02505 -0.9 -2.2 peptide chain release factor 3 compare
DZA65_RS13330 -0.9 -5.2 AI-2E family transporter YdiK compare
DZA65_RS22695 -0.9 -4.8 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
DZA65_RS02940 -0.9 -3.9 DedA family protein compare
DZA65_RS01790 -0.9 -6.7 tol-pal system-associated acyl-CoA thioesterase compare
DZA65_RS10950 -0.9 -4.7 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
DZA65_RS12455 -0.9 -2.7 nitrate reductase molybdenum cofactor assembly chaperone compare
DZA65_RS19385 -0.9 -5.5 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DZA65_RS21115 -0.9 -5.1 class I adenylate cyclase compare
DZA65_RS19495 -0.9 -1.3 two-component system response regulator ArcA compare
DZA65_RS19380 -0.9 -6.2 carbamoyl-phosphate synthase large subunit compare
DZA65_RS21275 -0.9 -5.0 guanosine-5'-triphosphate,3'-diphosphate diphosphatase compare
DZA65_RS19475 -0.9 -3.2 threonine synthase compare
DZA65_RS13880 -0.9 -3.9 flagellar export chaperone FliS compare
DZA65_RS19205 -0.9 -5.8 3-isopropylmalate dehydrogenase compare
DZA65_RS22145 -0.9 -1.1 DNA-directed RNA polymerase subunit omega compare
DZA65_RS15520 -0.9 -5.3 tRNA-Arg compare
DZA65_RS16705 -0.9 -2.8 co-chaperone HscB compare
DZA65_RS01585 -0.9 -5.3 serine endoprotease DegQ compare
DZA65_RS15580 -0.9 -3.8 enterochelin esterase compare
DZA65_RS19200 -0.9 -6.9 2-isopropylmalate synthase compare
DZA65_RS07065 -0.9 -2.6 dCTP deaminase compare
DZA65_RS03525 -0.9 -1.7 hypothetical protein compare
DZA65_RS05855 -0.8 -4.3 tRNA guanosine(34) transglycosylase Tgt compare
DZA65_RS09180 -0.8 -1.9 DsbA family protein compare
DZA65_RS15335 -0.8 -6.6 amidophosphoribosyltransferase compare
DZA65_RS18080 -0.8 -2.0 phosphoadenylyl-sulfate reductase compare
DZA65_RS09570 -0.8 -2.3 1-phosphofructokinase compare
DZA65_RS20560 -0.8 -3.2 transcriptional regulator compare
DZA65_RS20840 -0.8 -2.9 two-component system response regulator OmpR compare
DZA65_RS20355 -0.8 -3.2 Trk system potassium transporter TrkA compare
DZA65_RS09910 -0.8 -2.1 thioredoxin-disulfide reductase compare
DZA65_RS10960 -0.8 -2.5 C26 family cysteine hydrolase domain-containing family compare
DZA65_RS07980 -0.8 -1.4 phosphonate C-P lyase system protein PhnL compare
DZA65_RS17985 -0.8 -1.5 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
DZA65_RS06115 -0.8 -7.0 multidrug efflux RND transporter permease subunit compare
DZA65_RS01530 -0.8 -5.9 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
DZA65_RS11715 -0.8 -4.9 5-dehydro-4-deoxy-D-glucuronate isomerase compare
DZA65_RS15285 -0.8 -2.9 phosphate acetyltransferase compare
DZA65_RS19745 -0.8 -4.9 GDP-L-fucose synthase compare
DZA65_RS01970 -0.8 -5.0 aspartate carbamoyltransferase compare
DZA65_RS21495 -0.8 -3.3 cell division protein FtsN compare
DZA65_RS02465 -0.8 -2.3 cell division protein ZapA compare
DZA65_RS07915 -0.8 -2.3 aspartate/glutamate racemase family protein compare
DZA65_RS15540 -0.8 -4.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
DZA65_RS21080 -0.8 -4.6 DNA helicase II compare
DZA65_RS02870 -0.8 -2.1 chorismate lyase compare
DZA65_RS12355 -0.8 -1.9 ABC transporter permease compare
DZA65_RS12995 -0.8 -3.8 exoribonuclease II compare
DZA65_RS00970 -0.7 -2.7 twin-arginine translocase subunit TatA compare
DZA65_RS14710 -0.7 -2.3 LD-carboxypeptidase compare
DZA65_RS21475 -0.7 -1.3 met regulon transcriptional regulator MetJ compare
DZA65_RS22210 -0.7 -4.5 nitrogen regulation protein NR(I) compare
DZA65_RS20545 -0.7 -1.6 sulfurtransferase complex subunit TusB compare
DZA65_RS06120 -0.7 -5.4 efflux RND transporter periplasmic adaptor subunit compare
DZA65_RS10940 -0.7 -3.6 tryptophan synthase subunit alpha compare
DZA65_RS19175 -0.7 -4.7 catabolite repressor/activator compare
DZA65_RS18550 -0.7 -3.5 diaminopimelate decarboxylase compare
DZA65_RS17330 -0.7 -3.0 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
DZA65_RS10555 -0.7 -1.0 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
DZA65_RS18915 -0.7 -3.4 DeoR/GlpR transcriptional regulator compare
DZA65_RS12945 -0.7 -2.6 phage shock protein PspA compare
DZA65_RS19180 -0.7 -3.3 acetolactate synthase small subunit compare
DZA65_RS07180 -0.7 -4.2 NADP-dependent phosphogluconate dehydrogenase compare
DZA65_RS09375 -0.7 -1.0 type II toxin-antitoxin system RelE/ParE family toxin compare
DZA65_RS05240 -0.7 -2.5 oxidative damage protection protein compare
DZA65_RS07680 -0.7 -2.5 transcriptional regulator compare
DZA65_RS01560 -0.7 -3.8 phospholipid-binding protein MlaC compare
DZA65_RS16710 -0.7 -1.5 iron-sulfur cluster assembly protein IscA compare
DZA65_RS20005 -0.7 -1.1 helix-turn-helix transcriptional regulator compare
DZA65_RS10025 -0.7 -3.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
DZA65_RS19090 -0.7 -2.2 DUF721 domain-containing protein compare
DZA65_RS10980 -0.7 -1.6 23S rRNA pseudouridine(2605) synthase RluB compare
DZA65_RS05900 -0.7 -1.0 transcription antitermination factor NusB compare
DZA65_RS20835 -0.7 -3.7 two-component system sensor histidine kinase EnvZ compare
DZA65_RS00110 -0.7 -2.4 PAS sensor domain-containing protein compare
DZA65_RS02150 -0.7 -2.0 helix-turn-helix transcriptional regulator compare
DZA65_RS15345 -0.7 -4.1 cell division protein DedD compare
DZA65_RS17725 -0.6 -2.0 hypothetical protein compare
DZA65_RS19240 -0.6 -1.3 hypothetical protein compare
DZA65_RS16715 -0.6 -0.7 Fe-S cluster assembly scaffold IscU compare
DZA65_RS00980 -0.6 -4.6 Sec-independent protein translocase subunit TatC compare
DZA65_RS16670 -0.6 -2.0 nucleoside-diphosphate kinase compare
DZA65_RS06465 -0.6 -4.0 outer membrane protein assembly factor BamC compare
DZA65_RS04730 -0.6 -1.5 hypothetical protein compare
DZA65_RS13570 -0.6 -2.2 glycine zipper 2TM domain-containing protein compare
DZA65_RS10715 -0.6 -2.2 hypothetical protein compare
DZA65_RS05980 -0.6 -3.5 cytochrome o ubiquinol oxidase subunit I compare
DZA65_RS18110 -0.6 -2.1 7-carboxy-7-deazaguanine synthase QueE compare
DZA65_RS20865 -0.6 -0.9 pimeloyl-ACP methyl ester esterase BioH compare
DZA65_RS12955 -0.6 -2.4 peptide ABC transporter substrate-binding protein SapA compare
DZA65_RS20195 -0.6 -1.9 fumarate reductase subunit FrdD compare
DZA65_RS05655 -0.6 -1.4 hypothetical protein compare
DZA65_RS19655 -0.6 -1.0 adenylosuccinate synthase compare
DZA65_RS06510 -0.6 -1.0 transcription antiterminator/RNA stability regulator CspE compare
DZA65_RS17415 -0.6 -1.4 tRNA-Arg compare
DZA65_RS11830 -0.6 -3.2 DNA-binding transcriptional regulator KdgR compare
DZA65_RS21610 -0.6 -2.5 envelope stress response regulator transcription factor CpxR compare
DZA65_RS05620 -0.6 -1.9 GNAT family N-acetyltransferase compare
DZA65_RS03470 -0.6 -2.2 membrane protein compare


Specific Phenotypes

None in this experiment

For Dickeya dianthicola ME23 in plant experiments

For plant cv.Norland across organisms