Experiment setATCH157 for Dickeya dadantii 3937

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
DDA3937_RS19615 -4.3 -6.1 two-component system sensor histidine kinase EnvZ compare
DDA3937_RS18130 -4.2 -4.4 3-isopropylmalate dehydratase small subunit compare
DDA3937_RS00600 -3.9 -1.3 DcrB family lipoprotein compare
DDA3937_RS18120 -3.7 -10.2 3-isopropylmalate dehydrogenase compare
DDA3937_RS10140 -3.7 -6.6 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DDA3937_RS05150 -3.6 -5.5 sigma E protease regulator RseP compare
DDA3937_RS15420 -3.3 -6.9 IMP dehydrogenase compare
DDA3937_RS01600 -3.3 -13.2 outer membrane-stress sensor serine endopeptidase DegS compare
DDA3937_RS10985 -3.3 -3.9 peptide chain release factor N(5)-glutamine methyltransferase compare
DDA3937_RS11335 -3.2 -8.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DDA3937_RS03285 -3.2 -3.1 protein YgfX compare
DDA3937_RS14435 -3.1 -18.2 amidophosphoribosyltransferase compare
DDA3937_RS17830 -3.1 -2.6 DeoR/GlpR transcriptional regulator compare
DDA3937_RS04125 -3.1 -7.1 acetyltransferase compare
DDA3937_RS14910 -3.1 -10.9 beta-galactosidase compare
DDA3937_RS18125 -3.0 -11.3 3-isopropylmalate dehydratase large subunit compare
DDA3937_RS15765 -3.0 -12.2 RNA polymerase sigma factor RpoE compare
DDA3937_RS18275 -2.9 -11.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
DDA3937_RS06295 -2.8 -11.9 asparagine synthase B compare
DDA3937_RS06025 -2.7 -8.9 phosphoribosylformylglycinamidine cyclo-ligase compare
DDA3937_RS15655 -2.7 -15.3 phosphoribosylformylglycinamidine synthase compare
DDA3937_RS20455 -2.7 -4.0 putative lipopolysaccharide heptosyltransferase III compare
DDA3937_RS10950 -2.6 -6.9 fumarate/nitrate reduction transcriptional regulator Fnr compare
DDA3937_RS12855 -2.6 -8.5 quinone-dependent dihydroorotate dehydrogenase compare
DDA3937_RS18585 -2.5 -1.7 adenylosuccinate synthase compare
DDA3937_RS06770 -2.5 -2.7 oligosaccharide flippase family protein compare
DDA3937_RS01215 -2.5 -7.5 phosphoribosylamine--glycine ligase compare
DDA3937_RS06615 -2.4 -15.0 UDP-glucose 4-epimerase GalE compare
DDA3937_RS10435 -2.4 -2.7 septation protein A compare
DDA3937_RS02425 -2.4 -7.9 phosphoserine phosphatase compare
DDA3937_RS15815 -2.4 -1.5 tRNA-Val compare
DDA3937_RS01220 -2.4 -10.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DDA3937_RS01820 -2.4 -3.2 tol-pal system-associated acyl-CoA thioesterase compare
DDA3937_RS19510 -2.3 -2.5 peptidylprolyl isomerase A compare
DDA3937_RS15910 -2.3 -1.9 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
DDA3937_RS20415 -2.3 -2.9 rhodanese-like domain-containing protein compare
DDA3937_RS00910 -2.3 -12.5 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
DDA3937_RS22485 -2.3 -4.0 hypothetical protein compare
DDA3937_RS14385 -2.2 -9.7 phosphate acetyltransferase compare
DDA3937_RS21375 -2.2 -5.0 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
DDA3937_RS05160 -2.2 -2.6 molecular chaperone Skp compare
DDA3937_RS20535 -2.2 -12.1 orotate phosphoribosyltransferase compare
DDA3937_RS06075 -2.2 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DDA3937_RS16935 -2.2 -3.4 phosphoadenylyl-sulfate reductase compare
DDA3937_RS01530 -2.1 -4.4 RNA polymerase factor sigma-54 compare
DDA3937_RS18480 -2.1 -5.2 phosphoglycerate dehydrogenase compare
DDA3937_RS09670 -2.1 -7.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
DDA3937_RS02915 -2.1 -5.6 TetR/AcrR family transcriptional regulator compare
DDA3937_RS18115 -2.1 -9.3 2-isopropylmalate synthase compare
DDA3937_RS19015 -2.0 -8.1 glucose-6-phosphate isomerase compare
DDA3937_RS05645 -2.0 -11.2 ATP-dependent protease ATP-binding subunit ClpX compare
DDA3937_RS12610 -2.0 -5.2 Grx4 family monothiol glutaredoxin compare
DDA3937_RS13525 -2.0 -10.3 chemotaxis response regulator protein-glutamate methylesterase compare
DDA3937_RS17835 -1.9 -6.7 D-threonate 4-phosphate dehydrogenase compare
DDA3937_RS11080 -1.9 -3.3 exodeoxyribonuclease V subunit beta compare
DDA3937_RS01550 -1.9 -5.6 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
DDA3937_RS06535 -1.9 -1.7 tRNA-Lys compare
DDA3937_RS09015 -1.9 -3.4 hypothetical protein compare
DDA3937_RS06350 -1.9 -4.0 replication initiation negative regulator SeqA compare
DDA3937_RS12525 -1.9 -5.5 orotidine-5'-phosphate decarboxylase compare
DDA3937_RS01925 -1.9 -10.8 aspartate carbamoyltransferase compare
DDA3937_RS06235 -1.8 -6.9 CNNM family magnesium/cobalt transport protein CorC compare
DDA3937_RS06755 -1.8 -4.7 glycosyltransferase family 2 protein compare
DDA3937_RS18980 -1.8 -4.2 fumarate reductase subunit FrdD compare
DDA3937_RS04480 -1.8 -7.2 phosphoenolpyruvate-protein phosphotransferase PtsI compare
DDA3937_RS14630 -1.8 -3.2 tRNA-Arg compare
DDA3937_RS00100 -1.7 -10.1 thiol:disulfide interchange protein DsbA compare
DDA3937_RS18305 -1.7 -9.3 carbamoyl-phosphate synthase large subunit compare
DDA3937_RS18310 -1.6 -7.8 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DDA3937_RS09585 -1.6 -1.6 thioredoxin-disulfide reductase compare
DDA3937_RS19605 -1.6 -3.6 Hsp33 family molecular chaperone HslO compare
DDA3937_RS00915 -1.6 -3.7 HslU--HslV peptidase ATPase subunit compare
DDA3937_RS01695 -1.6 -3.6 divisome-associated lipoprotein YraP compare
DDA3937_RS05635 -1.6 -6.6 trigger factor compare
DDA3937_RS06145 -1.6 -1.7 lipoyl(octanoyl) transferase LipB compare
DDA3937_RS00775 -1.6 -3.1 envelope stress sensor histidine kinase CpxA compare
DDA3937_RS05405 -1.6 -1.9 recombination-associated protein RdgC compare
DDA3937_RS18690 -1.6 -4.5 glycosyltransferase compare
DDA3937_RS22035 -1.6 -2.0 immunity protein RhsIC compare
DDA3937_RS09070 -1.6 -2.3 hypothetical protein compare
DDA3937_RS16650 -1.6 -1.6 amino acid ABC transporter permease compare
DDA3937_RS14475 -1.5 -4.9 4-phosphoerythronate dehydrogenase PdxB compare
DDA3937_RS12805 -1.5 -8.2 phosphoenolpyruvate synthase compare
DDA3937_RS13170 -1.5 -4.3 dihydroorotase compare
DDA3937_RS11770 -1.5 -2.2 amino acid ABC transporter ATP-binding protein compare
DDA3937_RS13350 -1.5 -4.5 flagellar export chaperone FliS compare
DDA3937_RS14440 -1.5 -7.0 colicin V production protein compare
DDA3937_RS13345 -1.5 -5.1 flagellar filament capping protein FliD compare
DDA3937_RS05575 -1.5 -1.7 MFS transporter compare
DDA3937_RS15485 -1.5 -5.6 nucleoside-diphosphate kinase compare
DDA3937_RS00580 -1.5 -6.7 2-dehydro-3-deoxygluconokinase compare
DDA3937_RS05640 -1.4 -3.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
DDA3937_RS19880 -1.4 -4.8 DNA helicase II compare
DDA3937_RS00640 -1.4 -1.8 cell division ATP-binding protein FtsE compare
DDA3937_RS06455 -1.4 -3.1 succinate dehydrogenase iron-sulfur subunit compare
DDA3937_RS17160 -1.4 -6.4 outer membrane protein assembly factor compare
DDA3937_RS10460 -1.4 -6.4 tryptophan synthase subunit alpha compare
DDA3937_RS21310 -1.4 -3.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
DDA3937_RS10325 -1.4 -6.0 formyltetrahydrofolate deformylase compare
DDA3937_RS00900 -1.4 -5.1 cell division protein ZapB compare
DDA3937_RS22235 -1.4 -4.0 immunity 8 family protein compare
DDA3937_RS02160 -1.3 -1.3 transketolase compare
DDA3937_RS09650 -1.3 -7.0 pyruvate formate lyase 1-activating protein compare
DDA3937_RS00560 -1.3 -6.1 insulinase family protein compare
DDA3937_RS13520 -1.3 -6.3 chemotaxis response regulator CheY compare
DDA3937_RS09655 -1.3 -8.8 formate C-acetyltransferase compare
DDA3937_RS06610 -1.3 -5.5 galactose-1-phosphate uridylyltransferase compare
DDA3937_RS01740 -1.3 -2.8 outer membrane channel protein TolC compare
DDA3937_RS16860 -1.3 -3.8 Rcs stress response system protein RcsF compare
DDA3937_RS15450 -1.3 -2.7 outer membrane protein assembly factor BamB compare
DDA3937_RS15110 -1.3 -4.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
DDA3937_RS06040 -1.3 -1.5 DnaA inactivator Hda compare
DDA3937_RS23045 -1.3 -1.0 stress response protein AzuC compare
DDA3937_RS03420 -1.3 -3.1 sugar transferase compare
DDA3937_RS14470 -1.3 -2.5 aspartate-semialdehyde dehydrogenase compare
DDA3937_RS06490 -1.3 -1.7 cyd operon protein YbgE compare
DDA3937_RS11275 -1.3 -6.5 TerC family protein compare
DDA3937_RS21605 -1.3 -5.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
DDA3937_RS18970 -1.3 -7.0 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
DDA3937_RS14695 -1.3 -3.3 enterochelin esterase compare
DDA3937_RS15545 -1.3 -0.9 cysteine desulfurase compare
DDA3937_RS20700 -1.3 -1.2 hypothetical protein compare
DDA3937_RS14700 -1.2 -8.4 TonB-dependent siderophore receptor compare
DDA3937_RS00645 -1.2 -5.0 cell division protein FtsX compare
DDA3937_RS18670 -1.2 -3.0 ABC transporter permease compare
DDA3937_RS00140 -1.2 -5.1 ribosome-dependent GTPase TypA compare
DDA3937_RS10315 -1.2 -2.5 trimeric intracellular cation channel family protein compare
DDA3937_RS11330 -1.2 -5.0 5-dehydro-4-deoxy-D-glucuronate isomerase compare
DDA3937_RS02965 -1.2 -1.5 transcriptional regulator ArgR compare
DDA3937_RS14380 -1.2 -3.1 acetate kinase compare
DDA3937_RS15750 -1.2 -2.2 SoxR-reducing system protein RseC compare
DDA3937_RS16130 -1.2 -7.7 bifunctional chorismate mutase/prephenate dehydratase compare
DDA3937_RS19670 -1.2 -2.1 DeoR/GlpR family transcriptional regulator compare
DDA3937_RS19620 -1.2 -2.1 two-component system response regulator OmpR compare
DDA3937_RS19930 -1.2 -2.6 uroporphyrinogen-III C-methyltransferase compare
DDA3937_RS14655 -1.2 -4.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
DDA3937_RS06765 -1.2 -1.9 DUF616 domain-containing protein compare
DDA3937_RS13515 -1.2 -4.8 protein phosphatase CheZ compare
DDA3937_RS20970 -1.2 -3.3 mannitol operon repressor compare
DDA3937_RS00785 -1.2 -1.5 cell-envelope stress modulator CpxP compare
DDA3937_RS18575 -1.2 -7.0 class 1 fructose-bisphosphatase compare
DDA3937_RS17250 -1.1 -1.6 hypothetical protein compare
DDA3937_RS02815 -1.1 -1.9 transcriptional regulator ExuR compare
DDA3937_RS23335 -1.1 -2.5 leu operon leader peptide compare
DDA3937_RS11460 -1.1 -3.2 protease HtpX compare
DDA3937_RS18975 -1.1 -4.8 fumarate reductase subunit FrdC compare
DDA3937_RS14950 -1.1 -3.0 hypothetical protein compare
DDA3937_RS13840 -1.1 -3.1 TrbC/VirB2 family protein compare
DDA3937_RS18655 -1.1 -6.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
DDA3937_RS00420 -1.1 -4.7 LacI family DNA-binding transcriptional regulator compare
DDA3937_RS11675 -1.1 -2.1 type III secretion system ATPase SctN compare
DDA3937_RS11035 -1.1 -2.8 redox-regulated ATPase YchF compare
DDA3937_RS22175 -1.1 -1.7 IS3 family transposase compare
DDA3937_RS15635 -1.1 -2.5 nitrogen regulatory protein P-II compare
DDA3937_RS04945 -1.1 -4.5 RNA pyrophosphohydrolase compare
DDA3937_RS19035 -1.1 -6.3 DASS family sodium-coupled anion symporter compare
DDA3937_RS01000 -1.1 -2.2 glutamate racemase compare
DDA3937_RS10580 -1.1 -2.0 transcription modulator YdgT compare
DDA3937_RS06805 -1.1 -6.1 NADP-dependent phosphogluconate dehydrogenase compare
DDA3937_RS06155 -1.1 -6.2 D-alanyl-D-alanine carboxypeptidase DacA compare
DDA3937_RS06745 -1.1 -3.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
DDA3937_RS06475 -1.1 -1.4 succinate--CoA ligase subunit alpha compare
DDA3937_RS16555 -1.1 -6.7 esterase FrsA compare
DDA3937_RS05050 -1.1 -2.9 transcriptional regulator GcvA compare
DDA3937_RS09590 -1.1 -3.2 leucine-responsive transcriptional regulator Lrp compare
DDA3937_RS18080 -1.1 -1.4 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
DDA3937_RS17155 -1.1 -4.9 translocation/assembly module TamB compare
DDA3937_RS03100 -1.1 -1.6 DEAD/DEAH family ATP-dependent RNA helicase compare
DDA3937_RS13545 -1.1 -7.2 chemotaxis protein CheA compare
DDA3937_RS08480 -1.0 -3.9 NAD-dependent malic enzyme compare
DDA3937_RS01810 -1.0 -4.7 DedA family protein compare
DDA3937_RS17425 -1.0 -4.5 diaminopimelate decarboxylase compare
DDA3937_RS10210 -1.0 -1.9 GlsB/YeaQ/YmgE family stress response membrane protein compare
DDA3937_RS12900 -1.0 -8.7 porin compare
DDA3937_RS18965 -1.0 -5.2 fumarate reductase (quinol) flavoprotein subunit compare
DDA3937_RS10675 -1.0 -1.3 ROK family transcriptional regulator compare
DDA3937_RS08400 -1.0 -1.1 H-NS histone family protein compare
DDA3937_RS18675 -1.0 -2.6 ABC transporter ATP-binding protein compare
DDA3937_RS12920 -1.0 -1.4 MBL fold metallo-hydrolase compare
DDA3937_RS19650 -1.0 -1.8 DNA utilization protein GntX compare
DDA3937_RS06685 -1.0 -1.7 iron-sulfur cluster carrier protein ApbC compare
DDA3937_RS06795 -1.0 -2.0 UTP--glucose-1-phosphate uridylyltransferase compare
DDA3937_RS08735 -1.0 -3.7 D-alanyl-D-alanine endopeptidase compare
DDA3937_RS17080 -1.0 -2.8 FlxA-like family protein compare
DDA3937_RS14915 -1.0 -2.7 glycosyl hydrolase 53 family protein compare
DDA3937_RS04960 -1.0 -1.4 thymidylate synthase compare
DDA3937_RS13215 -1.0 -2.7 glucans biosynthesis glucosyltransferase MdoH compare
DDA3937_RS13420 -1.0 -4.6 flagellar biosynthesis protein FliQ compare
DDA3937_RS17180 -1.0 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
DDA3937_RS16110 -1.0 -5.7 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
DDA3937_RS13415 -1.0 -4.7 flagellar type III secretion system pore protein FliP compare
DDA3937_RS16085 -0.9 -2.0 23S ribosomal RNA compare
DDA3937_RS20475 -0.9 -1.2 glycosyltransferase family 4 protein compare
DDA3937_RS13920 -0.9 -1.2 CcdB family protein compare
DDA3937_RS09235 -0.9 -2.5 1-phosphofructokinase compare
DDA3937_RS19590 -0.9 -1.7 intracellular growth attenuator family protein compare
DDA3937_RS16915 -0.9 -3.9 adenylyl-sulfate kinase compare
DDA3937_RS06735 -0.9 -4.0 dTDP-glucose 4,6-dehydratase compare
DDA3937_RS11445 -0.9 -3.5 DNA-binding transcriptional regulator KdgR compare
DDA3937_RS15645 -0.9 -4.3 two-component system QseEF-associated lipoprotein QseG compare


Specific Phenotypes

For 1 genes in this experiment

For plant cv.Norland in Dickeya dadantii 3937

For plant cv.Norland across organisms