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  • Experiment setATCH157 for Dickeya dadantii 3937

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    Norland

    Group: plant
    Media: Potato tuber + cv.Norland
    Culturing: Dda3937, Potato tuber
    By: Tyler Helmann on 11/16/20

    Specific Phenotypes

    For 1 genes in this experiment

    For plant cv.Norland in Dickeya dadantii 3937

    For plant cv.Norland across organisms

    SEED Subsystems

    Subsystem #Specific
    Glycolysis and Gluconeogenesis 1
    Glycolysis and Gluconeogenesis, including Archaeal enzymes 1
    Pyruvate metabolism I: anaplerotic reactions, PEP 1

    Metabolic Maps

    Color code by fitness: see overview map or list of maps.

    Maps containing gene(s) with specific phenotypes:

    • Pyruvate metabolism
    • Reductive carboxylate cycle (CO2 fixation)

    MetaCyc Pathways

    Pathways that contain genes with specific phenotypes:

    Pathway #Steps #Present #Specific
    glycolysis V (Pyrococcus) 10 7 1
    glycolysis II (from fructose 6-phosphate) 11 11 1
    gluconeogenesis I 13 13 1
    glycolysis I (from glucose 6-phosphate) 13 13 1
    superpathway of glycolysis and the Entner-Doudoroff pathway 17 16 1
    superpathway of hexitol degradation (bacteria) 18 14 1
    gluconeogenesis II (Methanobacterium thermoautotrophicum) 18 9 1
    hexitol fermentation to lactate, formate, ethanol and acetate 19 18 1
    superpathway of anaerobic sucrose degradation 19 17 1
    superpathway of N-acetylneuraminate degradation 22 18 1
    superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass 26 25 1
    Methanobacterium thermoautotrophicum biosynthetic metabolism 56 22 1