Experiment setATCH156 for Dickeya dadantii 3937

Compare to:

Norland

200 most important genes:

  gene name fitness t score description  
DDA3937_RS18130 -4.9 -4.2 3-isopropylmalate dehydratase small subunit compare
DDA3937_RS06075 -4.1 -4.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DDA3937_RS14435 -4.0 -23.5 amidophosphoribosyltransferase compare
DDA3937_RS18120 -3.9 -8.7 3-isopropylmalate dehydrogenase compare
DDA3937_RS06025 -3.8 -6.8 phosphoribosylformylglycinamidine cyclo-ligase compare
DDA3937_RS19615 -3.6 -5.3 two-component system sensor histidine kinase EnvZ compare
DDA3937_RS18305 -3.4 -15.9 carbamoyl-phosphate synthase large subunit compare
DDA3937_RS18125 -3.3 -13.7 3-isopropylmalate dehydratase large subunit compare
DDA3937_RS15655 -3.3 -18.4 phosphoribosylformylglycinamidine synthase compare
DDA3937_RS12525 -3.3 -7.5 orotidine-5'-phosphate decarboxylase compare
DDA3937_RS18480 -3.2 -7.9 phosphoglycerate dehydrogenase compare
DDA3937_RS15420 -3.2 -6.1 IMP dehydrogenase compare
DDA3937_RS20535 -3.1 -12.0 orotate phosphoribosyltransferase compare
DDA3937_RS00600 -3.1 -1.9 DcrB family lipoprotein compare
DDA3937_RS09585 -3.1 -2.0 thioredoxin-disulfide reductase compare
DDA3937_RS10985 -2.9 -4.1 peptide chain release factor N(5)-glutamine methyltransferase compare
DDA3937_RS12855 -2.9 -9.3 quinone-dependent dihydroorotate dehydrogenase compare
DDA3937_RS01220 -2.8 -12.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DDA3937_RS17830 -2.8 -2.2 DeoR/GlpR transcriptional regulator compare
DDA3937_RS03420 -2.6 -4.9 sugar transferase compare
DDA3937_RS02425 -2.6 -8.5 phosphoserine phosphatase compare
DDA3937_RS18275 -2.6 -10.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
DDA3937_RS18585 -2.6 -1.7 adenylosuccinate synthase compare
DDA3937_RS09120 -2.4 -1.8 YejL family protein compare
DDA3937_RS18310 -2.4 -10.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DDA3937_RS01925 -2.4 -8.1 aspartate carbamoyltransferase compare
DDA3937_RS10140 -2.4 -6.9 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DDA3937_RS16935 -2.3 -3.2 phosphoadenylyl-sulfate reductase compare
DDA3937_RS01820 -2.2 -2.8 tol-pal system-associated acyl-CoA thioesterase compare
DDA3937_RS14910 -2.1 -11.5 beta-galactosidase compare
DDA3937_RS04125 -2.1 -3.9 acetyltransferase compare
DDA3937_RS15765 -2.1 -13.2 RNA polymerase sigma factor RpoE compare
DDA3937_RS15110 -2.1 -4.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
DDA3937_RS05150 -2.1 -6.0 sigma E protease regulator RseP compare
DDA3937_RS08400 -2.0 -2.0 H-NS histone family protein compare
DDA3937_RS01600 -1.9 -9.9 outer membrane-stress sensor serine endopeptidase DegS compare
DDA3937_RS18115 -1.9 -7.2 2-isopropylmalate synthase compare
DDA3937_RS00975 -1.8 -2.1 Si-specific NAD(P)(+) transhydrogenase compare
DDA3937_RS09575 -1.8 -1.1 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
DDA3937_RS14950 -1.8 -5.8 hypothetical protein compare
DDA3937_RS16130 -1.8 -6.9 bifunctional chorismate mutase/prephenate dehydratase compare
DDA3937_RS04480 -1.8 -6.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
DDA3937_RS01740 -1.8 -4.1 outer membrane channel protein TolC compare
DDA3937_RS10435 -1.8 -2.4 septation protein A compare
DDA3937_RS00135 -1.7 -1.3 glutamate--ammonia ligase compare
DDA3937_RS03285 -1.7 -2.2 protein YgfX compare
DDA3937_RS05640 -1.7 -7.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
DDA3937_RS10950 -1.7 -6.5 fumarate/nitrate reduction transcriptional regulator Fnr compare
DDA3937_RS12790 -1.6 -1.6 hotdog fold thioesterase compare
DDA3937_RS05645 -1.6 -9.2 ATP-dependent protease ATP-binding subunit ClpX compare
DDA3937_RS05500 -1.6 -5.0 transcriptional regulator NrdR compare
DDA3937_RS10460 -1.6 -6.4 tryptophan synthase subunit alpha compare
DDA3937_RS14440 -1.5 -6.5 colicin V production protein compare
DDA3937_RS13345 -1.5 -5.9 flagellar filament capping protein FliD compare
DDA3937_RS20455 -1.5 -2.7 putative lipopolysaccharide heptosyltransferase III compare
DDA3937_RS06615 -1.5 -9.4 UDP-glucose 4-epimerase GalE compare
DDA3937_RS06070 -1.5 -4.6 outer membrane protein assembly factor BamC compare
DDA3937_RS13355 -1.5 -4.1 flagellar protein FliT compare
DDA3937_RS01215 -1.5 -2.3 phosphoribosylamine--glycine ligase compare
DDA3937_RS10325 -1.5 -7.6 formyltetrahydrofolate deformylase compare
DDA3937_RS23305 -1.5 -1.7 hypothetical protein compare
DDA3937_RS06350 -1.4 -3.0 replication initiation negative regulator SeqA compare
DDA3937_RS19510 -1.4 -2.3 peptidylprolyl isomerase A compare
DDA3937_RS17425 -1.4 -7.5 diaminopimelate decarboxylase compare
DDA3937_RS17250 -1.4 -1.6 hypothetical protein compare
DDA3937_RS09670 -1.4 -5.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
DDA3937_RS21375 -1.4 -4.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
DDA3937_RS13170 -1.4 -2.7 dihydroorotase compare
DDA3937_RS14655 -1.4 -6.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
DDA3937_RS15485 -1.4 -10.0 nucleoside-diphosphate kinase compare
DDA3937_RS14385 -1.4 -5.4 phosphate acetyltransferase compare
DDA3937_RS17835 -1.4 -5.0 D-threonate 4-phosphate dehydrogenase compare
DDA3937_RS11715 -1.3 -2.3 hypothetical protein compare
DDA3937_RS09195 -1.3 -2.8 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
DDA3937_RS04960 -1.3 -2.3 thymidylate synthase compare
DDA3937_RS14475 -1.3 -4.5 4-phosphoerythronate dehydrogenase PdxB compare
DDA3937_RS13530 -1.3 -7.1 protein-glutamate O-methyltransferase CheR compare
DDA3937_RS06695 -1.3 -4.6 dCTP deaminase compare
DDA3937_RS14465 -1.3 -1.7 tRNA pseudouridine(38-40) synthase TruA compare
DDA3937_RS12920 -1.3 -1.6 MBL fold metallo-hydrolase compare
DDA3937_RS07760 -1.3 -2.9 iron ABC transporter permease compare
DDA3937_RS17155 -1.3 -7.0 translocation/assembly module TamB compare
DDA3937_RS14695 -1.3 -3.8 enterochelin esterase compare
DDA3937_RS11035 -1.3 -3.4 redox-regulated ATPase YchF compare
DDA3937_RS01410 -1.3 -4.7 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
DDA3937_RS12610 -1.3 -4.3 Grx4 family monothiol glutaredoxin compare
DDA3937_RS06295 -1.3 -6.6 asparagine synthase B compare
DDA3937_RS01550 -1.3 -4.4 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
DDA3937_RS19015 -1.2 -6.3 glucose-6-phosphate isomerase compare
DDA3937_RS13515 -1.2 -6.6 protein phosphatase CheZ compare
DDA3937_RS07765 -1.2 -2.2 ABC transporter ATP-binding protein compare
DDA3937_RS06755 -1.2 -3.0 glycosyltransferase family 2 protein compare
DDA3937_RS10580 -1.2 -2.1 transcription modulator YdgT compare
DDA3937_RS16095 -1.2 -2.3 16S ribosomal RNA compare
DDA3937_RS12240 -1.2 -2.9 acid resistance repetitive basic protein Asr compare
DDA3937_RS10405 -1.2 -2.2 cardiolipin synthase compare
DDA3937_RS13160 -1.2 -1.9 ribonuclease E compare
DDA3937_RS04945 -1.2 -5.9 RNA pyrophosphohydrolase compare
DDA3937_RS04895 -1.2 -2.1 oxidative damage protection protein compare
DDA3937_RS19785 -1.2 -2.0 gluconate operon transcriptional repressor GntR compare
DDA3937_RS06490 -1.1 -0.9 cyd operon protein YbgE compare
DDA3937_RS08145 -1.1 -3.0 metal ABC transporter permease compare
DDA3937_RS07785 -1.1 -1.4 OsmC family protein compare
DDA3937_RS22235 -1.1 -3.5 immunity 8 family protein compare
DDA3937_RS06215 -1.1 -3.5 glutamate/aspartate ABC transporter permease GltK compare
DDA3937_RS14675 -1.1 -1.9 ABC transporter ATP-binding protein compare
DDA3937_RS19880 -1.1 -3.4 DNA helicase II compare
DDA3937_RS11365 -1.1 -1.9 oligogalacturonate-specific porin KdgM compare
DDA3937_RS10465 -1.1 -4.1 tryptophan synthase subunit beta compare
DDA3937_RS08510 -1.1 -5.1 biotin synthase BioB compare
DDA3937_RS06805 -1.1 -7.3 NADP-dependent phosphogluconate dehydrogenase compare
DDA3937_RS23045 -1.1 -1.1 stress response protein AzuC compare
DDA3937_RS18005 -1.1 -2.1 secA regulator SecM compare
DDA3937_RS01110 -1.1 -2.1 hypothetical protein compare
DDA3937_RS13350 -1.1 -2.5 flagellar export chaperone FliS compare
DDA3937_RS16755 -1.1 -5.2 transcriptional repressor MprA compare
DDA3937_RS00140 -1.1 -4.6 ribosome-dependent GTPase TypA compare
DDA3937_RS13525 -1.1 -5.6 chemotaxis response regulator protein-glutamate methylesterase compare
DDA3937_RS11125 -1.1 -2.2 hypothetical protein compare
DDA3937_RS17305 -1.0 -1.6 pyrroline-5-carboxylate reductase compare
DDA3937_RS15815 -1.0 -0.9 tRNA-Val compare
DDA3937_RS21605 -1.0 -4.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
DDA3937_RS06770 -1.0 -1.2 oligosaccharide flippase family protein compare
DDA3937_RS16535 -1.0 -2.6 glutamate 5-kinase compare
DDA3937_RS19620 -1.0 -1.9 two-component system response regulator OmpR compare
DDA3937_RS14380 -1.0 -2.4 acetate kinase compare
DDA3937_RS03565 -1.0 -4.8 MarR family transcriptional regulator compare
DDA3937_RS21095 -1.0 -0.8 DUF1471 domain-containing protein compare
DDA3937_RS17515 -1.0 -1.3 DUF1471 domain-containing protein compare
DDA3937_RS04915 -1.0 -2.6 DUF2884 domain-containing protein compare
DDA3937_RS14700 -1.0 -7.0 TonB-dependent siderophore receptor compare
DDA3937_RS12900 -1.0 -8.7 porin compare
DDA3937_RS05105 -1.0 -2.4 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
DDA3937_RS23075 -1.0 -2.4 hypothetical protein compare
DDA3937_RS19915 -1.0 -0.9 class I adenylate cyclase compare
DDA3937_RS06235 -1.0 -3.9 CNNM family magnesium/cobalt transport protein CorC compare
DDA3937_RS22035 -0.9 -1.1 immunity protein RhsIC compare
DDA3937_RS00560 -0.9 -4.7 insulinase family protein compare
DDA3937_RS16565 -0.9 -1.7 hypothetical protein compare
DDA3937_RS12280 -0.9 -0.8 YnbE family lipoprotein compare
DDA3937_RS04130 -0.9 -1.2 hypothetical protein compare
DDA3937_RS20660 -0.9 -1.8 helix-turn-helix transcriptional regulator compare
DDA3937_RS12800 -0.9 -1.9 AI-2E family transporter YdiK compare
DDA3937_RS06270 -0.9 -1.0 tRNA-Met compare
DDA3937_RS06605 -0.9 -4.0 galactokinase compare
DDA3937_RS11335 -0.9 -4.3 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DDA3937_RS00275 -0.9 -3.1 GNAT family N-acetyltransferase compare
DDA3937_RS13540 -0.9 -4.5 chemotaxis protein CheW compare
DDA3937_RS20970 -0.9 -2.9 mannitol operon repressor compare
DDA3937_RS02915 -0.9 -2.6 TetR/AcrR family transcriptional regulator compare
DDA3937_RS17470 -0.9 -2.2 DUF2384 domain-containing protein compare
DDA3937_RS16110 -0.9 -4.3 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
DDA3937_RS17160 -0.9 -3.6 outer membrane protein assembly factor compare
DDA3937_RS06685 -0.9 -2.6 iron-sulfur cluster carrier protein ApbC compare
DDA3937_RS02345 -0.9 -1.8 hypothetical protein compare
DDA3937_RS10065 -0.9 -2.8 YebC/PmpR family DNA-binding transcriptional regulator compare
DDA3937_RS11590 -0.9 -1.7 hypothetical protein compare
DDA3937_RS05465 -0.9 -3.7 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
DDA3937_RS18270 -0.9 -3.3 Co2+/Mg2+ efflux protein ApaG compare
DDA3937_RS23315 -0.9 -1.2 protein MgtS compare
DDA3937_RS09655 -0.9 -6.6 formate C-acetyltransferase compare
DDA3937_RS10485 -0.9 -4.8 anthranilate synthase component 1 compare
DDA3937_RS10445 -0.9 -1.9 hypothetical protein compare
DDA3937_RS23335 -0.8 -1.8 leu operon leader peptide compare
DDA3937_RS02765 -0.8 -5.8 zinc uptake transcriptional repressor Zur compare
DDA3937_RS06475 -0.8 -1.4 succinate--CoA ligase subunit alpha compare
DDA3937_RS19395 -0.8 -2.7 peptidylprolyl isomerase compare
DDA3937_RS10340 -0.8 -5.2 two-component system response regulator RssB compare
DDA3937_RS10845 -0.8 -6.4 virulence factor SrfB compare
DDA3937_RS08130 -0.8 -1.7 malonate decarboxylase subunit epsilon compare
DDA3937_RS01590 -0.8 -2.6 BolA family iron metabolism protein IbaG compare
DDA3937_RS19435 -0.8 -2.9 phosphoribulokinase compare
DDA3937_RS13410 -0.8 -2.9 flagellar biosynthetic protein FliO compare
DDA3937_RS06740 -0.8 -3.6 glucose-1-phosphate thymidylyltransferase RfbA compare
DDA3937_RS08570 -0.8 -2.8 molybdenum cofactor biosynthesis protein B compare
DDA3937_RS12390 -0.8 -3.0 transcriptional regulator TyrR compare
DDA3937_RS12510 -0.8 -2.8 L-ribulose-5-phosphate 4-epimerase compare
DDA3937_RS00775 -0.8 -1.2 envelope stress sensor histidine kinase CpxA compare
DDA3937_RS01530 -0.8 -1.3 RNA polymerase factor sigma-54 compare
DDA3937_RS05160 -0.8 -1.0 molecular chaperone Skp compare
DDA3937_RS01460 -0.8 -5.3 metalloprotease TldD compare
DDA3937_RS04940 -0.8 -2.7 DNA mismatch repair endonuclease MutH compare
DDA3937_RS20130 -0.8 -3.2 ketol-acid reductoisomerase compare
DDA3937_RS00005 -0.8 -2.9 FMN-binding protein MioC compare
DDA3937_RS05790 -0.8 -2.9 recombination protein RecR compare
DDA3937_RS10675 -0.8 -1.0 ROK family transcriptional regulator compare
DDA3937_RS13520 -0.8 -3.6 chemotaxis response regulator CheY compare
DDA3937_RS00345 -0.8 -3.5 inorganic phosphate transporter PitA compare
DDA3937_RS13510 -0.8 -5.7 flagellar type III secretion system protein FlhB compare
DDA3937_RS09590 -0.8 -2.4 leucine-responsive transcriptional regulator Lrp compare
DDA3937_RS13110 -0.8 -2.6 beta-ketoacyl-ACP synthase II compare
DDA3937_RS01455 -0.8 -4.2 AsmA2 domain-containing protein YhdP compare
DDA3937_RS04820 -0.8 -1.9 integrase compare
DDA3937_RS04855 -0.8 -1.3 hypothetical protein compare
DDA3937_RS20155 -0.8 -5.4 dihydroxy-acid dehydratase compare
DDA3937_RS16530 -0.8 -4.8 glutamate-5-semialdehyde dehydrogenase compare
DDA3937_RS19605 -0.8 -1.9 Hsp33 family molecular chaperone HslO compare
DDA3937_RS15865 -0.7 -5.2 dGTPase compare
DDA3937_RS06040 -0.7 -1.0 DnaA inactivator Hda compare
DDA3937_RS10840 -0.7 -4.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dickeya dadantii 3937 in plant experiments

For plant cv.Norland across organisms