Experiment setATCH155 for Dickeya dadantii 3937

Compare to:

Norland

200 most detrimental genes:

  gene name fitness t score description  
DDA3937_RS12030 +3.6 1.3 hypothetical protein compare
DDA3937_RS21960 +3.4 7.0 helix-turn-helix transcriptional regulator compare
DDA3937_RS02395 +2.7 2.2 Xaa-Pro aminopeptidase compare
DDA3937_RS15705 +2.5 14.4 cyclic-guanylate-specific phosphodiesterase compare
DDA3937_RS19360 +2.4 12.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
DDA3937_RS13560 +1.9 12.1 flagellar transcriptional regulator FlhC compare
DDA3937_RS19620 +1.8 1.2 two-component system response regulator OmpR compare
DDA3937_RS09625 +1.8 2.8 DsbA family protein compare
DDA3937_RS04235 +1.8 6.3 phage holin family protein compare
DDA3937_RS11100 +1.8 3.3 hypothetical protein compare
DDA3937_RS22450 +1.6 2.1 NAD-dependent dehydratase compare
DDA3937_RS12790 +1.5 1.4 hotdog fold thioesterase compare
DDA3937_RS23315 +1.5 1.0 protein MgtS compare
DDA3937_RS13565 +1.4 7.1 flagellar transcriptional regulator FlhD compare
DDA3937_RS06715 +1.4 3.5 protein-tyrosine-phosphatase compare
DDA3937_RS01710 +1.4 8.9 penicillin-binding protein activator compare
DDA3937_RS13840 +1.4 1.4 TrbC/VirB2 family protein compare
DDA3937_RS19580 +1.3 8.4 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA compare
DDA3937_RS04220 +1.3 3.1 hypothetical protein compare
DDA3937_RS07975 +1.3 1.6 ATP-binding cassette domain-containing protein compare
DDA3937_RS23155 +1.3 2.0 hypothetical protein compare
DDA3937_RS18190 +1.2 2.6 hypothetical protein compare
DDA3937_RS14100 +1.2 1.6 nitrate ABC transporter permease compare
DDA3937_RS13555 +1.2 7.0 flagellar motor stator protein MotA compare
DDA3937_RS01645 +1.2 2.0 stringent starvation protein A compare
DDA3937_RS18665 +1.2 9.8 GDP-mannose 4,6-dehydratase compare
DDA3937_RS13340 +1.2 4.0 flagellin FliC compare
DDA3937_RS23340 +1.1 1.3 ilvB operon leader peptide IvbL compare
DDA3937_RS02155 +1.1 3.8 DeoR/GlpR transcriptional regulator compare
DDA3937_RS05260 +1.1 2.5 YbhB/YbcL family Raf kinase inhibitor-like protein compare
DDA3937_RS21990 +1.1 1.5 hypothetical protein compare
DDA3937_RS04405 +1.1 3.5 GNAT family N-acetyltransferase compare
DDA3937_RS17700 +1.1 2.2 AAA family ATPase compare
DDA3937_RS10045 +1.1 2.9 MAPEG family protein compare
DDA3937_RS11250 +1.1 1.3 YoaH family protein compare
DDA3937_RS20815 +1.1 7.0 two-component system sensor histidine kinase VfmI compare
DDA3937_RS18685 +1.1 6.8 WbeA compare
DDA3937_RS04225 +1.1 5.0 DUF2586 domain-containing protein compare
DDA3937_RS22280 +1.1 0.9 GpE family phage tail protein compare
DDA3937_RS06210 +1.1 0.6 amino acid ABC transporter ATP-binding protein compare
DDA3937_RS04320 +1.0 2.5 outer membrane protein assembly factor BamE compare
DDA3937_RS15195 +1.0 1.2 acylphosphatase compare
DDA3937_RS20675 +1.0 2.2 hypothetical protein compare
DDA3937_RS09075 +1.0 1.6 hypothetical protein compare
DDA3937_RS01915 +1.0 1.3 2-iminobutanoate/2-iminopropanoate deaminase compare
DDA3937_RS00055 +1.0 8.2 ribose operon transcriptional repressor RbsR compare
DDA3937_RS04215 +1.0 2.9 phage tail protein compare
DDA3937_RS13935 +1.0 4.0 hypothetical protein compare
DDA3937_RS03665 +1.0 6.8 MurR/RpiR family transcriptional regulator compare
DDA3937_RS15155 +0.9 1.9 exopolyphosphatase compare
DDA3937_RS20835 +0.9 6.4 AraC family transcriptional regulator VfmE compare
DDA3937_RS06180 +0.9 1.5 ribosome silencing factor compare
DDA3937_RS15060 +0.9 2.0 imidazolonepropionase compare
DDA3937_RS11245 +0.9 1.1 RidA family protein compare
DDA3937_RS18675 +0.9 1.4 ABC transporter ATP-binding protein compare
DDA3937_RS21095 +0.9 1.1 DUF1471 domain-containing protein compare
DDA3937_RS13070 +0.9 1.8 purine nucleoside phosphoramidase compare
DDA3937_RS13550 +0.9 4.7 flagellar motor protein MotB compare
DDA3937_RS00385 +0.9 0.9 DUF1471 domain-containing protein compare
DDA3937_RS19660 +0.9 5.1 4-alpha-glucanotransferase compare
DDA3937_RS02875 +0.9 5.7 MFS transporter compare
DDA3937_RS04980 +0.9 2.0 potassium:proton antiporter compare
DDA3937_RS06145 +0.9 1.3 lipoyl(octanoyl) transferase LipB compare
DDA3937_RS22080 +0.9 1.4 transposase compare
DDA3937_RS04395 +0.9 1.6 RpoE-regulated lipoprotein compare
DDA3937_RS07430 +0.8 3.5 HycH family protein compare
DDA3937_RS07420 +0.8 1.6 DUF2442 domain-containing protein compare
DDA3937_RS05395 +0.8 2.4 pyrimidine/purine nucleoside phosphorylase compare
DDA3937_RS07335 +0.8 1.8 DUF1971 domain-containing protein compare
DDA3937_RS10760 +0.8 3.6 paraquat-inducible protein A compare
DDA3937_RS20830 +0.8 4.1 ABC transporter ATP-binding protein compare
DDA3937_RS18280 +0.8 2.4 acyltransferase compare
DDA3937_RS19430 +0.8 3.5 YheU family protein compare
DDA3937_RS19005 +0.8 1.8 DUF4156 domain-containing protein compare
DDA3937_RS14545 +0.8 1.9 type 1 glutamine amidotransferase domain-containing protein compare
DDA3937_RS22980 +0.8 0.8 IS3 family transposase compare
DDA3937_RS14005 +0.8 1.7 His-Xaa-Ser system protein HxsD compare
DDA3937_RS08815 +0.8 0.9 DNA starvation/stationary phase protection protein Dps compare
DDA3937_RS15660 +0.8 5.9 membrane-bound lytic murein transglycosylase MltF compare
DDA3937_RS06055 +0.8 1.6 thioredoxin-dependent thiol peroxidase compare
DDA3937_RS16300 +0.8 1.8 hypothetical protein compare
DDA3937_RS20820 +0.8 4.1 two-component system response regulator VfmH compare
DDA3937_RS09905 +0.8 2.3 cyanophycin synthetase compare
DDA3937_RS11870 +0.8 1.7 SIR2 family protein compare
DDA3937_RS07340 +0.8 1.8 DUF1869 domain-containing protein compare
DDA3937_RS18550 +0.8 5.4 deoxyribonuclease I compare
DDA3937_RS13945 +0.8 5.7 hypothetical protein compare
DDA3937_RS01325 +0.8 2.0 hypothetical protein compare
DDA3937_RS12015 +0.8 3.2 DUF2732 family protein compare
DDA3937_RS22515 +0.8 1.0 helix-turn-helix transcriptional regulator compare
DDA3937_RS09510 +0.7 1.8 arginine ABC transporter substrate-binding protein compare
DDA3937_RS10420 +0.7 1.4 YciI family protein compare
DDA3937_RS07905 +0.7 1.8 EVE domain-containing protein compare
DDA3937_RS11465 +0.7 5.4 EAL domain-containing protein compare
DDA3937_RS06670 +0.7 1.8 VirK family protein compare
DDA3937_RS15115 +0.7 1.9 HAAAP family serine/threonine permease compare
DDA3937_RS22360 +0.7 4.9 deoxyribonuclease compare
DDA3937_RS15135 +0.7 3.8 phosphate ABC transporter ATP-binding protein compare
DDA3937_RS12520 +0.7 2.3 stress response translation initiation inhibitor YciH compare
DDA3937_RS07980 +0.7 1.6 ABC transporter permease subunit compare
DDA3937_RS19860 +0.7 1.7 thioesterase family protein compare
DDA3937_RS13300 +0.7 3.5 RNA polymerase sigma factor FliA compare
DDA3937_RS11365 +0.7 0.7 oligogalacturonate-specific porin KdgM compare
DDA3937_RS04815 +0.7 2.8 alpha/beta hydrolase compare
DDA3937_RS02700 +0.7 1.5 transcriptional regulator compare
DDA3937_RS09715 +0.7 1.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
DDA3937_RS15985 +0.7 2.3 hypoxanthine phosphoribosyltransferase compare
DDA3937_RS03450 +0.7 1.1 TOBE domain-containing protein compare
DDA3937_RS05995 +0.7 2.3 transporter substrate-binding domain-containing protein compare
DDA3937_RS00325 +0.7 1.7 DUF1471 domain-containing protein compare
DDA3937_RS13060 +0.7 1.2 penicillin-binding protein activator LpoB compare
DDA3937_RS03900 +0.7 2.0 replication initiator protein A compare
DDA3937_RS14130 +0.7 1.2 TetR/AcrR family transcriptional regulator compare
DDA3937_RS10870 +0.7 2.2 myo-inositol-1-monophosphatase compare
DDA3937_RS05320 +0.7 2.5 hypothetical protein compare
DDA3937_RS03265 +0.7 1.7 HD domain-containing protein compare
DDA3937_RS08990 +0.7 1.6 glutaredoxin-dependent arsenate reductase compare
DDA3937_RS18195 +0.7 0.8 hypothetical protein compare
DDA3937_RS13750 +0.7 2.3 hypothetical protein compare
DDA3937_RS15915 +0.6 0.9 bifunctional glycosyl transferase/transpeptidase compare
DDA3937_RS02335 +0.6 2.5 hypothetical protein compare
DDA3937_RS20850 +0.6 2.0 hypothetical protein compare
DDA3937_RS00845 +0.6 0.9 6-phosphofructokinase compare
DDA3937_RS04845 +0.6 1.8 helix-turn-helix transcriptional regulator compare
DDA3937_RS02870 +0.6 4.6 signal transduction histidine-protein kinase/phosphatase UhpB compare
DDA3937_RS16050 +0.6 1.6 ribonuclease HI compare
DDA3937_RS10695 +0.6 2.4 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG compare
DDA3937_RS18560 +0.6 1.3 glutathione synthase compare
DDA3937_RS04495 +0.6 1.4 sulfate transporter CysZ compare
DDA3937_RS18095 +0.6 1.7 catabolite repressor/activator compare
DDA3937_RS07425 +0.6 1.7 hydrogenase maturation peptidase HycI compare
DDA3937_RS17400 +0.6 1.3 PTS sugar transporter subunit IIB compare
DDA3937_RS00865 +0.6 0.7 triose-phosphate isomerase compare
DDA3937_RS05965 +0.6 1.1 ABC transporter ATP-binding protein compare
DDA3937_RS03125 +0.6 1.8 N-acetyltransferase compare
DDA3937_RS02450 +0.6 1.5 molecular chaperone OsmY compare
DDA3937_RS04230 +0.6 2.4 DUF2597 family protein compare
DDA3937_RS10305 +0.6 2.3 DUF1496 domain-containing protein compare
DDA3937_RS04490 +0.6 1.2 cysteine synthase A compare
DDA3937_RS13585 +0.6 1.6 VOC family protein compare
DDA3937_RS17305 +0.6 1.0 pyrroline-5-carboxylate reductase compare
DDA3937_RS05200 +0.6 1.0 VOC family protein compare
DDA3937_RS20645 +0.6 2.9 YicC family protein compare
DDA3937_RS09615 +0.6 2.7 Tat proofreading chaperone DmsD compare
DDA3937_RS05185 +0.6 2.6 ribonuclease HII compare
DDA3937_RS03485 +0.6 1.4 hypothetical protein compare
DDA3937_RS05315 +0.6 1.3 DUF1987 domain-containing protein compare
DDA3937_RS19465 +0.6 3.0 PatA/PatG family cyanobactin maturation protease compare
DDA3937_RS01450 +0.6 4.9 ribonuclease G compare
DDA3937_RS00050 +0.6 3.0 ribokinase compare
DDA3937_RS10430 +0.6 1.4 acyl-CoA thioester hydrolase YciA compare
DDA3937_RS17335 +0.6 2.1 GNAT family N-acetyltransferase compare
DDA3937_RS05865 +0.6 1.1 2Fe-2S ferredoxin-like protein compare
DDA3937_RS00760 +0.6 1.2 hypothetical protein compare
DDA3937_RS21985 +0.6 2.0 50S ribosomal protein L36 compare
DDA3937_RS09515 +0.6 2.0 arginine ABC transporter ATP-binding protein ArtP compare
DDA3937_RS22410 +0.6 1.3 hypothetical protein compare
DDA3937_RS02255 +0.6 1.6 LysR family transcriptional regulator compare
DDA3937_RS05075 +0.6 2.1 SecY-interacting protein compare
DDA3937_RS12580 +0.6 1.2 MliC family protein compare
DDA3937_RS12930 +0.6 3.5 L,D-transpeptidase compare
DDA3937_RS09015 +0.6 1.1 hypothetical protein compare
DDA3937_RS05025 +0.6 1.3 GNAT family N-acetyltransferase compare
DDA3937_RS11710 +0.6 0.9 type III secretion system export apparatus subunit SctU compare
DDA3937_RS14480 +0.6 1.1 sensor histidine kinase compare
DDA3937_RS02115 +0.6 1.9 amino acid transporter compare
DDA3937_RS07440 +0.6 1.2 hydrogenase 4 subunit H compare
DDA3937_RS22240 +0.6 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
DDA3937_RS07740 +0.5 2.3 siderophore biosynthesis protein SbnG compare
DDA3937_RS03870 +0.5 1.7 DNA repair protein RadC compare
DDA3937_RS04195 +0.5 1.1 GPO family capsid scaffolding protein compare
DDA3937_RS01680 +0.5 1.5 isoprenoid biosynthesis glyoxalase ElbB compare
DDA3937_RS18475 +0.5 1.8 zinc-binding alcohol dehydrogenase family protein compare
DDA3937_RS12670 +0.5 1.6 general secretion pathway protein GspK compare
DDA3937_RS23375 +0.5 1.1 hypothetical protein compare
DDA3937_RS14975 +0.5 3.1 MHS family MFS transporter compare
DDA3937_RS09320 +0.5 1.9 S-formylglutathione hydrolase compare
DDA3937_RS13485 +0.5 2.0 flagellar basal body P-ring formation protein FlgA compare
DDA3937_RS16310 +0.5 1.9 sugar ABC transporter ATP-binding protein compare
DDA3937_RS04690 +0.5 1.7 NUDIX domain-containing protein compare
DDA3937_RS16505 +0.5 1.9 hypothetical protein compare
DDA3937_RS05555 +0.5 1.6 2-dehydropantoate 2-reductase compare
DDA3937_RS04430 +0.5 0.9 Hcp family type VI secretion system effector compare
DDA3937_RS03095 +0.5 2.3 lipoprotein NlpI compare
DDA3937_RS07685 +0.5 1.2 CRISPR-associated protein Cas4 compare
DDA3937_RS12890 +0.5 1.7 nicotinate phosphoribosyltransferase compare
DDA3937_RS06260 +0.5 2.4 multidrug efflux SMR transporter compare
DDA3937_RS03260 +0.5 1.3 LysE family translocator compare
DDA3937_RS22800 +0.5 2.2 TonB-dependent receptor compare
DDA3937_RS05655 +0.5 1.6 DNA-binding protein HU-beta compare
DDA3937_RS01520 +0.5 1.2 PTS IIA-like nitrogen regulatory protein PtsN compare
DDA3937_RS13620 +0.5 2.1 glycoside hydrolase family 104 protein compare
DDA3937_RS15405 +0.5 1.6 hypothetical protein compare
DDA3937_RS13185 +0.5 1.8 cytochrome b compare
DDA3937_RS05405 +0.5 0.9 recombination-associated protein RdgC compare
DDA3937_RS01355 +0.5 2.3 hypothetical protein compare
DDA3937_RS13740 +0.5 1.6 DUF736 domain-containing protein compare
DDA3937_RS13625 +0.5 1.3 LysB family phage lysis regulatory protein compare
DDA3937_RS05790 +0.5 0.9 recombination protein RecR compare
DDA3937_RS13240 +0.5 1.1 GhoT/OrtT family toxin compare


Specific Phenotypes

None in this experiment

For Dickeya dadantii 3937 in plant experiments

For plant cv.Norland across organisms