Experiment setATCH112 for Dickeya dadantii 3937
LB
Group: controlMedia: LB + kanamycin (50 ug/ml)
Culturing: Dda3937, 24 well plate
By: Tyler Helmann on 8/2/20
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 1 genes in this experiment
For control kanamycin in Dickeya dadantii 3937
For control kanamycin across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Arginine and Ornithine Degradation | 1 |
| Proline, 4-hydroxyproline uptake and utilization | 1 |
| Respiratory dehydrogenases 1 | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| proline to cytochrome bo oxidase electron transfer | 2 | 1 | 1 |
| L-proline degradation I | 3 | 2 | 1 |
| L-arginine degradation I (arginase pathway) | 3 | 1 | 1 |
| ethene biosynthesis II (microbes) | 4 | 1 | 1 |