Experiment set9S517 for Escherichia coli BL21

Compare to:

Bas26

200 most detrimental genes:

  gene name fitness t score description  
ECD_01405 +1.4 1.9 methionine N-acyltransferase; L-amino acid N-acyltransferase compare
ECD_01591 +1.1 2.2 PLP-dependent beta-cystathionase and maltose regulon regulator compare
ECD_01034 +1.1 1.1 curli production assembly/transport outer membrane lipoprotein compare
ECD_01048 +0.9 2.2 multicopy suppressor of secY and secA compare
ECD_01003 +0.9 3.9 DnaK co-chaperone; curved DNA-binding protein compare
ECD_01706 +0.9 2.1 N,N'-diacetylchitobiose-specific enzyme IIC component of PTS compare
ECD_00941 +0.9 1.2 NAD(P)H-dependent FMN reductase compare
ECD_02155 +0.9 1.2 DUF1175 family protein, putative host defense protein compare
ECD_01863 +0.9 1.7 flagellar class II regulon transcriptional activator, with FlhC compare
ECD_02456 +0.9 1.3 putative 4Fe-4S cluster-containing protein compare
ECD_01404 +0.9 1.8 DUF606 family inner membrane protein compare
ECD_01216 +0.8 2.8 UPF0056 family inner membrane protein compare
ECD_02320 +0.8 2.1 WGR domain protein compare
ECD_03695 +0.8 1.4 Magnesium and cobalt transport protein corA compare
ECD_04119 +0.8 1.4 SopA-central-domain-like hexapeptide repeat protein compare
ECD_02286 +0.8 1.3 putative lipoprotein involved in colanic acid biosynthesis compare
ECD_03687 +0.7 1.2 site-specific tyrosine recombinase compare
ECD_04362 +0.7 1.1 hypothetical protein compare
ECD_01441 +0.7 1.7 D,D-dipeptide ABC transporter ATPase compare
ECD_03785 +0.7 2.5 putative enzyme IIA component of PTS compare
ECD_02034 +0.7 2.0 hypothetical protein compare
ECD_02330 +0.7 2.7 penicillin binding protein PBP4B; weak DD-carboxypeptidase activity compare
ECD_01828 +0.7 2.3 zinc ABC transporter periplasmic binding protein compare
ECD_00988 +0.7 2.8 putative O-antigen capsule production periplasmic protein compare
ECD_01293 +0.7 2.2 putative family 65 glycosyl hydrolase compare
ECD_00993 +0.7 1.1 cold shock gene compare
ECD_01804 +0.7 2.2 inner membrane PqiA domain protein compare
ECD_00681 +0.7 1.3 succinate dehydrogenase, membrane subunit, binds cytochrome b556 compare
ECD_00439 +0.6 2.0 inner membrane protein; stimulator of the QmcA suppressor of ftsH-htpX compare
ECD_01375 +0.6 1.4 putative periplasmic protein compare
ECD_00967 +0.6 2.2 methylglyoxal synthase compare
ECD_01969 +0.6 1.8 inner membrane protein compare
ECD_01845 +0.6 1.8 copper homeostasis protein compare
ECD_00939 +0.6 1.6 alkanesulfonate monooxygenase, FMNH(2)-dependent compare
ECD_00500 +0.6 1.1 DLP12 prophage; endonuclease RUS compare
ECD_00614 +0.6 2.7 uncharacterized protein compare
ECD_04391 +0.6 1.9 hypothetical protein compare
ECD_02028 +0.6 1.9 putative kinase compare
ECD_03997 +0.6 1.6 putative 4Fe-4S mono-cluster protein compare
ECD_01478 +0.6 1.1 altronate oxidoreductase, NAD-dependent compare
ECD_01200 +0.6 2.1 sensory histidine kinase in two-component regulatory system with NarL compare
ECD_01773 +0.6 1.6 putative YeaWX dioxygenase beta subunit, reductase component compare
ECD_01946 +0.6 1.7 dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit compare
ECD_00831 +0.6 1.7 retron EC86 RNA-directed DNA polymerase-like protein compare
ECD_00292 +0.6 2.0 transcriptional activator of cyn operon; autorepressor compare
ECD_00843 +0.6 1.5 phage baseplate assembly protein compare
ECD_02042 +0.6 0.9 DUF2574 family protein compare
ECD_02285 +0.6 1.0 uncharacterized protein compare
ECD_04019 +0.6 1.3 entericidin B membrane lipoprotein compare
ECD_01168 +0.6 1.0 lytic murein endotransglycosylase E compare
ECD_02054 +0.5 1.2 putative response regulator in two-component system withYehU compare
ECD_01732 +0.5 2.4 DNA topoisomerase III compare
ECD_02091 +0.5 1.1 ribonucleoside hydrolase 2 compare
ECD_02218 +0.5 1.4 sugar phosphatase compare
ECD_00985 +0.5 1.2 O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase compare
ECD_03021 +0.5 1.1 UPF0306 family protein compare
ECD_00981 +0.5 2.8 cytochrome bd-II oxidase, subunit I compare
ECD_01301 +0.5 0.8 lipid hydroperoxide peroxidase compare
ECD_02415 +0.5 2.7 aminopeptidase B compare
ECD_01486 +0.5 1.0 UPF0056 family inner membrane protein compare
ECD_01774 +0.5 0.8 ribonuclease D compare
ECD_01827 +0.5 2.5 murein DD-endopeptidase, space-maker hydrolase, septation protein compare
ECD_03213 +0.5 1.5 putative antitoxin for Fic compare
ECD_02919 +0.5 1.7 motility and biofilm regulator compare
ECD_02036 +0.5 0.9 hypothetical protein compare
ECD_00506 +0.5 1.9 DLP12 prophage; putative phage lysis protein compare
ECD_02280 +0.5 1.5 hybrid sensory histidine kinase in two-component regulatory system with EvgA compare
ECD_02250 +0.5 0.8 uncharacterized protein compare
ECD_01353 +0.5 1.6 putative membrane-anchored protein, function unknown compare
ECD_02258 +0.5 1.4 putative fimbrial-like adhesin protein compare
ECD_01666 +0.5 1.7 putative electron transfer flavoprotein subunit compare
ECD_00929 +0.5 2.3 murein L,D-transpeptidase compare
ECD_01816 +0.5 2.3 protease II compare
ECD_00098 +0.5 1.2 regulator of secA translation compare
ECD_01148 +0.5 1.6 hypothetical protein compare
ECD_01966 +0.5 2.0 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase compare
ECD_00872 +0.5 2.0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; OM lipoprotein compare
ECD_01319 +0.5 1.8 putative Zn(II) transporter compare
ECD_03816 +0.5 1.7 molecular chaperone and ATPase component of HslUV protease compare
ECD_00808 +0.5 2.1 undecaprenyl pyrophosphate phosphatase compare
ECD_01396 +0.5 1.2 putative DNA-binding transcriptional regulator and putative aminotransferase compare
ECD_01161 +0.5 1.9 sodium:proton antiporter compare
ECD_01921 +0.5 1.5 ATP phosphoribosyltransferase compare
ECD_01365 +0.5 1.1 putative esterase compare
ECD_02256 +0.5 1.8 putative DNA endonuclease compare
ECD_01556 +0.5 1.2 putative selenate reductase, periplasmic compare
ECD_01103 +0.5 1.0 beta N-acetyl-glucosaminidase compare
ECD_02059 +0.5 1.2 putative ABC transporter ATPase compare
ECD_01240 +0.5 1.4 PHP domain protein compare
ECD_00976 +0.5 2.2 hydrogenase 1, large subunit compare
ECD_01956 +0.5 1.8 putative glycosyl transferase compare
ECD_00818 +0.5 1.3 hypothetical protein compare
ECD_03798 +0.5 0.9 response regulator in two-component regulatory system with CpxA compare
ECD_00450 +0.5 0.9 conserved protein, rhs-like protein compare
ECD_02093 +0.4 1.5 putative nucleoside transporter compare
ECD_00623 +0.4 1.6 glutamate/aspartate periplasmic binding protein compare
ECD_00704 +0.4 1.0 nicotinamide riboside transporter compare
ECD_01693 +0.4 1.4 uncharacterized protein compare
ECD_01635 +0.4 1.1 autotransporter adhesin-related protein compare
ECD_01717 +0.4 2.3 succinylornithine transaminase, PLP-dependent compare
ECD_01289 +0.4 1.3 putative sugar ABC transporter permease compare
ECD_02867 +0.4 2.2 protein involved with the maturation of hydrogenases 1 and 2 compare
ECD_01691 +0.4 1.2 acid-inducible putative outer membrane protein compare
ECD_02736 +0.4 1.3 glycine cleavage complex lipoylprotein compare
ECD_00569 +0.4 1.6 Spo0J family protein, ParB-like nuclease domain compare
ECD_02322 +0.4 2.0 sulfate/thiosulfate transporter subunit compare
ECD_04177 +0.4 1.7 N-acetylneuraminic acid mutarotase compare
ECD_00768 +0.4 2.2 putative dehydrogenase compare
ECD_01000 +0.4 2.4 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit compare
ECD_02135 +0.4 0.9 ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA compare
ECD_01800 +0.4 1.5 putative endopeptidase compare
ECD_04212 +0.4 1.1 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB compare
ECD_04178 +0.4 1.6 N-acetylnuraminic acid outer membrane channel protein compare
ECD_01912 +0.4 1.4 DNA gyrase inhibitor compare
ECD_01624 +0.4 1.0 glutaredoxin-4 compare
ECD_00283 +0.4 1.3 amino acid exporter for proline, lysine, glutamate, homoserine compare
ECD_00464 +0.4 1.5 glycerate kinase II compare
ECD_00194 +0.4 2.1 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent compare
ECD_00744 +0.4 1.4 malonyl-ACP O-methyltransferase, SAM-dependent compare
ECD_04308 +0.4 1.4 uncharacterized protein compare
ECD_02131 +0.4 1.9 ferredoxin-type protein compare
ECD_03558 +0.4 2.3 putative Cys-type oxidative YidJ-maturating enzyme compare
ECD_03556 +0.4 1.1 ilvB operon leader peptide compare
ECD_03339 +0.4 1.1 hypothetical protein compare
ECD_01779 +0.4 0.9 putative reactive intermediate deaminase compare
ECD_01118 +0.4 1.1 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_00674 +0.4 1.4 endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase compare
ECD_00920 +0.4 1.7 DUF1006 family protein with C-terminal wHTH domain compare
ECD_00276 +0.4 1.6 putative NAD(P)-binding succinyl-CoA synthase compare
ECD_02853 +0.4 1.2 hypothetical protein compare
ECD_00703 +0.4 1.2 quinolinate synthase, subunit A compare
ECD_01312 +0.4 0.8 O-6-alkylguanine-DNA:cysteine-protein methyltransferase compare
ECD_02273 +0.4 2.2 putative inner membrane protein compare
ECD_01210 +0.4 1.1 putative patatin-like family phospholipase compare
ECD_01968 +0.4 1.0 colanic acid export protein; outer membrane auxillary lipoprotein compare
ECD_00765 +0.4 0.8 DUF1768 family protein compare
ECD_02292 +0.4 1.6 putative DNA-binding protein compare
ECD_01572 +0.4 0.9 pyridine nucleotide transhydrogenase, alpha subunit compare
ECD_00470 +0.4 2.2 putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein compare
ECD_01696 +0.4 0.7 2-deoxyglucose-6-P phosphatase compare
ECD_00651 +0.4 1.1 response regulator in two-component regulatory system with KdpD compare
ECD_02111 +0.4 1.7 uncharacterized protein compare
ECD_04309 +0.4 1.2 uncharacterized protein compare
ECD_02385 +0.4 2.3 putative UPF0118 family inner membrane permease compare
ECD_00467 +0.4 1.8 ureidoglycolate dehydrogenase compare
ECD_02849 +0.4 1.7 glycolate-inducible glc operon transcriptional repressor; autorepressor compare
ECD_03877 +0.4 1.0 HU, DNA-binding transcriptional regulator, alpha subunit compare
ECD_01435 +0.4 0.8 putative DNA-binding transcriptional regulator compare
ECD_01236 +0.4 2.2 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase compare
ECD_02118 +0.4 1.8 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor compare
ECD_00782 +0.4 1.2 OPG biosynthetic transmembrane phosphoethanolamine transferase compare
ECD_02380 +0.4 1.4 hydrogenase 4, Fe-S subunit compare
ECD_01649 +0.4 0.9 cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent compare
ECD_00065 +0.4 1.8 L-ribulokinase compare
ECD_01388 +0.4 0.7 lipoprotein compare
ECD_02102 +0.4 2.0 putative NAD-dependent D-mannonate oxidoreductase compare
ECD_01620 +0.4 1.1 chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme compare
ECD_01313 +0.4 1.2 p-aminobenzoyl-glutamate transporter; membrane protein compare
ECD_00968 +0.4 1.3 UPF0319 family protein compare
ECD_00380 +0.4 0.6 cytochrome o ubiquinol oxidase subunit IV compare
ECD_03220 +0.4 0.9 small lipoprotein compare
ECD_00446 +0.4 1.6 putative ABC transporter ATPase compare
ECD_02792 +0.4 0.9 oxidative damage protective factor for iron-sulfur proteins compare
ECD_01557 +0.4 1.3 S- and N-oxide reductase, A subunit, periplasmic compare
ECD_02915 +0.4 0.8 putative fimbrial-like adhesin protein compare
ECD_01124 +0.4 0.8 spermidine/putrescine ABC transporter ATPase compare
ECD_01910 +0.4 1.0 UPF0265 family protein compare
ECD_00448 +0.4 1.5 Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor compare
ECD_00655 +0.4 1.6 potassium translocating ATPase, subunit A compare
ECD_02035 +0.4 1.4 hypothetical protein compare
ECD_00502 +0.4 0.7 DLP12 prophage; putative antitermination protein compare
ECD_02104 +0.4 1.1 lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase compare
ECD_02741 +0.4 1.9 UPF0149 family protein compare
ECD_00860 +0.3 1.9 putrescine ABC transporter ATPase compare
ECD_02908 +0.3 1.7 hypothetical protein compare
ECD_00785 +0.3 1.6 putative transporter compare
ECD_02438 +0.3 0.9 putative sugar ABC transporter permease compare
ECD_01573 +0.3 1.2 DUF1471 family periplasmic protein compare
ECD_00288 +0.3 1.4 2-methylcitrate dehydratase compare
ECD_00295 +0.3 1.7 putative cyanate transporter compare
ECD_01838 +0.3 1.3 isochorismatase family protein compare
ECD_02349 +0.3 1.1 phosphate acetyltransferase compare
ECD_00629 +0.3 1.6 tRNA-i(6)A37 methylthiotransferase compare
ECD_02147 +0.3 1.2 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein compare
ECD_00438 +0.3 0.6 copper-responsive regulon transcriptional regulator compare
ECD_02107 +0.3 1.4 microcin C ABC transporter periplasmic binding protein compare
ECD_04269 +0.3 1.0 transcriptional repressor, tryptophan-binding compare
ECD_02391 +0.3 1.2 phosphoribosylaminoimidazole synthetase compare
ECD_02483 +0.3 2.3 UPF0124 family protein compare
ECD_00344 +0.3 2.2 L-arabinose-inducible putative transporter, MFS family compare
ECD_01292 +0.3 1.2 putative NADH-binding oxidoreductase compare
ECD_03338 +0.3 1.3 DUF4049 family protein compare
ECD_00955 +0.3 0.7 paraquat-inducible, SoxRS-regulated MCE domain protein compare
ECD_02193 +0.3 1.7 putative membrane-anchored DUF883 family ribosome-binding protein compare
ECD_04145 +0.3 1.1 IS911 protein compare
ECD_03270 +0.3 2.7 mal regulon transcriptional activator conserved
ECD_04041 +0.3 1.2 modulator for HflB protease specific for phage lambda cII repressor compare
ECD_00235 +0.3 1.4 DNA-binding transcriptional regulator compare
ECD_03359 +0.3 1.0 acid-resistance membrane protein compare
ECD_00163 +0.3 2.0 phosphodiesterase with model substrate bis-pNPP compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms