Experiment set9S262 for Pseudomonas aeruginosa MRSN321
LB with Nalidixic acid sodium salt 0.0976470588235294 mM
Group: stressMedia: LB + Nalidixic acid sodium salt (0.097647 mM), pH=7
Culturing: Paeruginosa_MRSN321_ML2, 96 deep-well block, Aerobic, at 30 (C), shaken=700 rpm
By: Hans and Ryan on 1/27/26
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 5 genes in this experiment
For stress Nalidixic acid sodium salt in Pseudomonas aeruginosa MRSN321
For stress Nalidixic acid sodium salt across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| DNA repair, bacterial | 3 |
| Alginate metabolism | 1 |
| DNA-replication | 1 |
| DNA Repair Base Excision | 1 |
| Mannose Metabolism | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| D-mannose degradation I | 2 | 1 | 1 |
| D-mannose degradation II | 2 | 1 | 1 |
| β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation | 3 | 2 | 1 |
| mannitol biosynthesis | 3 | 1 | 1 |
| GDP-mannose biosynthesis | 4 | 4 | 1 |
| mannitol degradation II | 4 | 2 | 1 |
| 1,5-anhydrofructose degradation | 5 | 2 | 1 |
| β-(1,4)-mannan degradation | 7 | 2 | 1 |
| colanic acid building blocks biosynthesis | 11 | 9 | 1 |
| superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis | 14 | 7 | 1 |