Experiment set9IT096 for Pseudomonas simiae WCS417

200 most detrimental genes:

gene	name	fitness	t score	description
PS417_10720		+3.4	9.2	chemotaxis protein CheY
PS417_16370		+3.2	11.4	chemotaxis protein CheY
PS417_09235		+3.2	1.9	molecular chaperone
PS417_00195		+2.8	3.3	hypothetical protein
PS417_06540		+2.5	2.6	membrane protein
PS417_10055		+2.3	4.7	hypothetical protein
PS417_23490		+2.3	2.2	dihydrofolate reductase
PS417_00975		+2.2	2.2	hypothetical protein
PS417_17440		+2.2	1.8	beta-lactamase
PS417_22210		+2.1	1.8	AraC family transcriptional regulator
PS417_07085		+2.0	2.2	transcriptional regulator
PS417_19975		+2.0	4.1	hypothetical protein
PS417_28295		+2.0	4.4	glutamine synthetase
PS417_19560		+2.0	7.3	amino acid ABC transporter substrate-binding protein
PS417_02165		+1.9	2.0	ZapA
PS417_09930		+1.9	2.8	hypothetical protein
PS417_16720		+1.9	1.9	membrane protein
PS417_20205		+1.9	5.1	LysR family transcriptional regulator
PS417_14345		+1.8	3.0	LysR family transcriptional regulator
PS417_16020		+1.8	3.9	LysR family transcriptional regulator
PS417_02615		+1.8	5.7	transglutaminase
PS417_26900		+1.7	1.9	L-cystine transporter tcyP
PS417_00845		+1.6	2.0	transcriptional regulator
PS417_06970		+1.6	1.9	LysR family transcriptional regulator
PS417_21780		+1.6	4.2	argininosuccinate lyase
PS417_06125		+1.6	3.0	hypothetical protein
PS417_01030		+1.5	1.5	glutamine ABC transporter substrate-binding protein
PS417_26395		+1.5	2.6	hypothetical protein
PS417_02695		+1.5	1.8	protein hupE
PS417_10145		+1.5	1.9	hypothetical protein
PS417_24895		+1.5	1.0	hypothetical protein
PS417_05325		+1.5	3.1	fimbrial protein
PS417_18860		+1.4	4.8	transcriptional regulator
PS417_11075		+1.4	2.8	hydroxypyruvate isomerase
PS417_15885		+1.4	2.1	GCN5 family acetyltransferase
PS417_09545		+1.4	1.8	aldehyde-activating protein
PS417_01270		+1.4	1.8	iron ABC transporter substrate-binding protein
PS417_02895		+1.4	1.8	precorrin-6Y C5,15-methyltransferase
PS417_21850		+1.4	1.1	LysR family transcriptional regulator
PS417_11545		+1.4	2.1	spermidine/putrescine ABC transporter substrate-binding protein
PS417_23590		+1.4	4.1	bleomycin resistance protein
PS417_12670		+1.4	2.4	hypothetical protein
PS417_10715		+1.4	2.4	Cro/Cl family transcriptional regulator
PS417_10875		+1.3	1.7	AraC family transcriptional regulator
PS417_12220		+1.3	2.3	hydroxyacylglutathione hydrolase
PS417_09010		+1.3	1.1	phosphohistidine phosphatase
PS417_26445		+1.3	2.9	ArsR family transcriptional regulator
PS417_12015		+1.3	2.0	phosphoglycerate mutase
PS417_26275		+1.3	2.7	glycine/betaine ABC transporter substrate-binding protein
PS417_05065		+1.3	1.3	hypothetical protein
PS417_26420		+1.3	1.7	hypothetical protein
PS417_17680		+1.3	2.9	ABC transporter
PS417_27225		+1.3	2.2	protease
PS417_05140		+1.2	2.3	dipicolinate synthase
PS417_27605		+1.2	3.4	hypothetical protein
PS417_10335		+1.2	1.6	peroxiredoxin
PS417_07270		+1.2	1.7	LysR family transcriptional regulator
PS417_19705		+1.2	1.5	flagellar biosynthesis regulator FlhF
PS417_00755		+1.2	0.6	biofilm PGA synthesis protein PgaD
PS417_06830		+1.2	2.8	hypothetical protein
PS417_12190		+1.2	2.2	microcin ABC transporter ATP-binding protein
PS417_15975		+1.2	1.3	glutamate carboxypeptidase
PS417_05160		+1.2	0.8	DNA polymerase III subunit chi
PS417_23765		+1.2	3.0	hypothetical protein
PS417_23210		+1.2	2.2	serine acetyltransferase
PS417_03465		+1.2	1.3	type III secretion protein
PS417_13175		+1.2	1.9	iron transporter
PS417_02075		+1.2	1.5	thioesterase
PS417_23520		+1.2	1.7	cysteine biosynthesis protein CysZ
PS417_20855		+1.1	1.4	hypothetical protein
PS417_11185		+1.1	2.7	dimethylallyltransferase
PS417_26805		+1.1	0.7	cell division protein FtsE
PS417_13620		+1.1	1.5	thermostable hemolysin
PS417_08625		+1.1	1.3	membrane protein
PS417_01145		+1.1	1.1	taurine transporter ATP-binding subunit
PS417_06045		+1.1	1.4	membrane protein
PS417_10675		+1.1	1.0	TetR family transcriptional regulator
PS417_02100		+1.1	3.6	membrane protein
PS417_16735		+1.1	2.4	aldehyde dehydrogenase
PS417_16695		+1.1	1.8	hypothetical protein
PS417_08130		+1.1	1.8	aspartate aminotransferase
PS417_06365		+1.1	4.4	RNA polymerase sigma factor
PS417_03725		+1.1	1.8	acyltransferase
PS417_23420		+1.1	1.7	LuxR family transcriptional regulator
PS417_00550		+1.1	0.9	hypothetical protein
PS417_05025		+1.1	1.8	maleylacetoacetate isomerase
PS417_11110		+1.1	3.7	xylose isomerase
PS417_24370		+1.1	0.8	(2Fe-2S)-binding protein
PS417_09570		+1.1	3.0	GCN5 family acetyltransferase
PS417_13235		+1.1	1.4	siderophore biosynthesis protein
PS417_23135		+1.1	1.7	GTP-binding protein
PS417_14315		+1.1	1.5	2,5-dioxovalerate dehydrogenase
PS417_13895		+1.1	2.3	chemotaxis protein CheB
PS417_05100		+1.0	1.1	RNA polymerase sigma factor
PS417_07560		+1.0	1.1	universal stress protein UspA
PS417_22300		+1.0	0.9	LTXXQ domain protein
PS417_21830		+1.0	1.7	TetR family transcriptional regulator
PS417_03105		+1.0	2.2	secretin
PS417_02015		+1.0	3.6	membrane protein
PS417_05475		+1.0	1.3	arginase
PS417_19500		+1.0	2.5	antibiotic synthesis protein MbtH
PS417_05840		+1.0	1.9	LuxR family transcriptional regulator
PS417_23605		+1.0	1.8	permease DsdX
PS417_00670		+1.0	1.9	RNA polymerase sigma factor
PS417_08205		+1.0	2.9	acetyltransferase
PS417_07845		+1.0	1.5	transcriptional regulator
PS417_22640		+1.0	2.1	cytochrome C biogenesis protein CcmE
PS417_07070		+1.0	2.0	membrane protein
PS417_01180		+1.0	2.9	ribosomal protein S6 modification protein
PS417_25990		+1.0	2.6	malonyl-CoA O-methyltransferase
PS417_24840		+1.0	1.2	hypothetical protein
PS417_01490		+1.0	3.1	ABC transporter permease
PS417_19065		+1.0	0.9	monooxygenase
PS417_18780		+1.0	1.1	flavin reductase
PS417_08770		+1.0	0.9	hypothetical protein
PS417_14295		+1.0	1.3	AraC family transcriptional regulator
PS417_16160		+1.0	1.3	ABC transporter substrate-binding protein
PS417_18105		+1.0	0.9	iron-dicitrate transporter substrate-binding subunit
PS417_14175		+1.0	1.9	ArsC family transcriptional regulator
PS417_08230		+0.9	1.2	lipopolysaccharide biosynthesis protein RfbH
PS417_26115		+0.9	2.1	glutamine ABC transporter ATP-binding protein
PS417_15935		+0.9	1.2	Rrf2 family transcriptional regulator
PS417_25030		+0.9	1.4	hypothetical protein
PS417_10425		+0.9	0.9	hypothetical protein
PS417_07360		+0.9	2.6	ArtI protein
PS417_17380		+0.9	1.8	membrane protein
PS417_23845		+0.9	3.1	hemin ABC transporter ATP-binding protein
PS417_04965		+0.9	1.4	hypothetical protein
PS417_04775		+0.9	2.7	short-chain dehydrogenase
PS417_09745		+0.9	2.7	peptide ABC transporter substrate-binding protein
PS417_13425		+0.9	1.3	cupin
PS417_18930		+0.9	1.4	restriction endonuclease subunit S
PS417_03365		+0.9	1.8	transcriptional regulator
PS417_20670		+0.9	3.3	glycosyl transferase family 2
PS417_17795		+0.9	0.6	ABC transporter permease
PS417_15255		+0.9	3.6	serine/threonine protein kinase
PS417_27205		+0.9	1.6	adenylate cyclase
PS417_13180		+0.9	2.6	AraC family transcriptional regulator
PS417_27215		+0.9	2.1	hypothetical protein
PS417_28525		+0.9	2.1	RNA polymerase sigma factor
PS417_03485		+0.9	1.9	type III secretion protein
PS417_18200		+0.9	1.7	glyoxalase
PS417_02630		+0.9	1.5	NAD synthetase
PS417_21360		+0.9	0.8	termination factor Rho
PS417_22175		+0.9	1.2	amino acid transporter LysE
PS417_25905		+0.9	0.9	AsnC family transcriptional regulator
PS417_02740		+0.9	1.4	LysR family transcriptional regulator
PS417_17110		+0.9	2.8	spore coat protein
PS417_17270		+0.9	1.9	D-alanyl-D-alanine endopeptidase
PS417_08840		+0.9	2.2	serine/threonine protein kinase
PS417_12955		+0.9	3.4	sulfonate ABC transporter substrate-binding protein
PS417_09925		+0.9	1.1	hypothetical protein
PS417_28175		+0.9	2.0	GNAT family acetyltransferase
PS417_23300		+0.9	2.0	hypothetical protein
PS417_09435		+0.9	2.2	glyoxalase
PS417_18950		+0.9	2.0	3-dehydroquinate dehydratase
PS417_26015		+0.9	1.8	ModE family transcriptional regulator
PS417_09420		+0.9	1.1	LysR family transcriptional regulator
PS417_07700		+0.9	1.0	chromosome partitioning protein ParA
PS417_21145		+0.9	1.7	oxidoreductase
PS417_09715		+0.9	2.5	hypothetical protein
PS417_10855		+0.9	2.4	chemotaxis protein CheY
PS417_02210		+0.9	3.3	diguanylate cyclase
PS417_00990		+0.9	2.6	LysR family transcriptional regulator
PS417_13050		+0.9	1.0	N-acetylglucosamine-6-sulfatase
PS417_17160		+0.9	1.9	1-aminocyclopropane-1-carboxylate deaminase
PS417_08620		+0.9	0.6	hypothetical protein
PS417_27900		+0.9	1.6	ABC transporter ATP-binding protein
PS417_20595		+0.9	2.4	hypothetical protein
PS417_12845		+0.9	2.1	NAD(P)H dehydrogenase
PS417_13850		+0.8	1.6	2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data)
PS417_02805		+0.8	1.2	urease subunit gamma
PS417_14240		+0.8	1.8	isochorismatase
PS417_00345		+0.8	1.5	copper-binding protein
PS417_24705		+0.8	1.0	D-alanyl-D-alanine carboxypeptidase
PS417_01825		+0.8	1.7	chemotaxis protein
PS417_03950		+0.8	1.4	hypothetical protein
PS417_03045		+0.8	1.0	hypothetical protein
PS417_16910		+0.8	2.4	multidrug resistance protein B
PS417_26220		+0.8	1.8	Rieske (2Fe-2S) protein
PS417_11375		+0.8	0.9	hypothetical protein
PS417_15745		+0.8	1.4	lipid carrier protein
PS417_24885		+0.8	1.4	transcriptional regulator
PS417_09625		+0.8	1.3	sugar ABC transporter substrate-binding protein
PS417_12265		+0.8	1.2	ACP phosphodiesterase
PS417_22705		+0.8	1.6	glycerol-3-phosphate ABC transporter substrate-binding protein
PS417_19210		+0.8	2.3	acetyl-CoA acetyltransferase
PS417_02820		+0.8	0.8	urea ABC transporter ATP-binding protein
PS417_01195		+0.8	1.0	RNA-binding protein S4
PS417_03385		+0.8	1.0	flavin reductase
PS417_27240		+0.8	2.9	hypothetical protein
PS417_03130		+0.8	2.4	hypothetical protein
PS417_15585		+0.8	1.3	DNA repair nucleotidyltransferase
PS417_09245		+0.8	0.7	recombinase RdgC
PS417_17620		+0.8	2.3	biotin synthase
PS417_27875		+0.8	2.9	histidine kinase
PS417_28405		+0.8	1.0	hypothetical protein
PS417_26390		+0.8	1.1	acyltransferase
PS417_18370		+0.8	1.5	hypothetical protein
PS417_13960		+0.8	2.8	MFS transporter

Specific Phenotypes

For 3 genes in this experiment