| | gene | name | fitness | t score | description | |
|---|
| b4201 | priB | -3.9 | -2.7 | primosomal replication protein N (NCBI) | compare |
| b0463 | acrA | -3.9 | -11.8 | multidrug efflux system (NCBI) | compare |
| b3035 | tolC | -3.8 | -7.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0462 | acrB | -3.7 | -17.2 | multidrug efflux system protein (NCBI) | compare |
| b2509 | xseA | -3.5 | -9.0 | exodeoxyribonuclease VII large subunit (NCBI) | compare |
| b1334 | fnr | -2.9 | -3.3 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0912 | ihfB | -2.7 | -3.1 | integration host factor subunit beta (NCBI) | compare |
| b2528 | iscA | -2.5 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4237 | nrdG | -2.3 | -11.0 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b1346 | ydaQ | -2.2 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0729 | sucD | -2.2 | -4.3 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0049 | apaH | -2.1 | -3.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b2830 | nudH | -2.1 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0765 | modC | -2.0 | -5.8 | molybdate transporter subunit (NCBI) | compare |
| b4238 | nrdD | -2.0 | -14.0 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b0902 | pflA | -1.9 | -6.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b3163 | nlpI | -1.8 | -5.0 | hypothetical protein (NCBI) | compare |
| b3935 | priA | -1.8 | -3.1 | primosome assembly protein PriA (NCBI) | compare |
| b3792 | wzxE | -1.8 | -5.9 | O-antigen translocase (NCBI) | compare |
| b2215 | ompC | -1.8 | -8.3 | outer membrane porin protein C (NCBI) | compare |
| b0053 | surA | -1.8 | -4.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0145 | dksA | -1.7 | -2.5 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0799 | dinG | -1.7 | -6.9 | ATP-dependent DNA helicase (NCBI) | compare |
| b1454 | yncG | -1.7 | -3.0 | predicted enzyme (NCBI) | compare |
| b4503 | yafF | -1.7 | -1.1 | no description | compare |
| b1125 | potB | -1.6 | -4.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1882 | cheY | -1.6 | -0.8 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0728 | sucC | -1.6 | -5.9 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2258 | b2258 | -1.6 | -1.9 | putative transport/receptor protein (VIMSS) | compare |
| b0683 | fur | -1.6 | -1.5 | ferric uptake regulator (NCBI) | compare |
| b2330 | yfcB | -1.5 | -1.0 | putative adenine-specific methylase (VIMSS) | compare |
| b3813 | uvrD | -1.5 | -10.5 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b0783 | moaC | -1.5 | -5.1 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b3443 | yrhA | -1.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3930 | menA | -1.4 | -10.7 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b0949 | uup | -1.4 | -6.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1506 | yneL | -1.4 | -1.3 | predicted transcriptional regulator (NCBI) | compare |
| b2807 | ygdD | -1.4 | -3.9 | conserved inner membrane protein (NCBI) | compare |
| b2288 | nuoA | -1.3 | -3.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1248 | b1248 | -1.3 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3199 | yrbK | -1.3 | -2.7 | hypothetical protein (NCBI) | compare |
| b1575 | dicB | -1.3 | -1.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0764 | modB | -1.3 | -4.0 | molybdate ABC transporter permease protein (NCBI) | compare |
| b2616 | recN | -1.3 | -7.2 | recombination and repair protein (NCBI) | compare |
| b0014 | dnaK | -1.3 | -1.8 | molecular chaperone DnaK (NCBI) | compare |
| b1176 | minC | -1.3 | -2.3 | septum formation inhibitor (NCBI) | compare |
| b4402 | yjjY | -1.3 | -1.1 | hypothetical protein (NCBI) | compare |
| b0239 | frsA | -1.3 | -7.0 | fermentation/respiration switch protein (NCBI) | compare |
| b0763 | modA | -1.3 | -4.4 | molybdate transporter subunit (NCBI) | compare |
| b0785 | moaE | -1.2 | -3.9 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1361 | ydaW | -1.2 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2553 | glnB | -1.2 | -3.4 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3857 | mobA | -1.2 | -5.5 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b0866 | ybjQ | -1.1 | -1.3 | hypothetical protein (NCBI) | compare |
| b3839 | tatC | -1.1 | -5.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1292 | sapC | -1.1 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4603 | rseX | -1.1 | -0.5 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4025 | pgi | -1.1 | -5.7 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1252 | tonB | -1.1 | -2.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1266 | yciV | -1.1 | -2.3 | hypothetical protein (NCBI) | compare |
| b0903 | pflB | -1.1 | -6.8 | pyruvate formate lyase I (NCBI) | compare |
| b4000 | hupA | -1.1 | -3.9 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1830 | prc | -1.1 | -3.4 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0641 | rlpB | -1.0 | -2.3 | minor lipoprotein (NCBI) | compare |
| b4246 | pyrL | -1.0 | -2.2 | pyrBI operon leader peptide (NCBI) | compare |
| b1600 | mdtJ | -1.0 | -0.7 | multidrug efflux system transporter (NCBI) | compare |
| b3863 | polA | -1.0 | -0.7 | DNA polymerase I (NCBI) | compare |
| b4535 | yniD | -1.0 | -1.3 | predicted protein (RefSeq) | compare |
| b0781 | moaA | -1.0 | -5.3 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b1109 | ndh | -1.0 | -2.6 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3096 | yqjB | -1.0 | -4.0 | hypothetical protein (NCBI) | compare |
| b0535 | fimZ | -1.0 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1527 | yneK | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b1482 | osmC | -1.0 | -1.4 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b2276 | nuoN | -1.0 | -3.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1686 | ydiI | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b2896 | ygfX | -0.9 | -4.4 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -0.9 | -2.6 | translocation protein TolB precursor (NCBI) | compare |
| b1192 | ldcA | -0.9 | -2.3 | L,D-carboxypeptidase A (NCBI) | compare |
| b1936 | intG | -0.9 | -0.8 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1693 | aroD | -0.9 | -3.8 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0386 | proC | -0.9 | -3.2 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0617 | citD | -0.9 | -1.8 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b3652 | recG | -0.9 | -5.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b1848 | yebG | -0.9 | -1.3 | conserved protein regulated by LexA (NCBI) | compare |
| b3787 | rffD | -0.9 | -6.1 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1434 | ydcN | -0.9 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3183 | obgE | -0.9 | -0.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1765 | ydjA | -0.9 | -1.0 | predicted oxidoreductase (NCBI) | compare |
| b2284 | nuoF | -0.9 | -3.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2859 | ygeO | -0.9 | -1.3 | hypothetical protein (RefSeq) | compare |
| b4592 | yccB | -0.9 | -1.2 | hypothetical protein (RefSeq) | compare |
| b2937 | speB | -0.9 | -4.0 | agmatinase (NCBI) | compare |
| b0737 | tolQ | -0.9 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0957 | ompA | -0.9 | -2.3 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2897 | ygfY | -0.9 | -1.9 | hypothetical protein (NCBI) | compare |
| b1712 | ihfA | -0.8 | -0.5 | integration host factor subunit alpha (NCBI) | compare |
| b0688 | pgm | -0.8 | -2.1 | phosphoglucomutase (NCBI) | compare |
| b3778 | rep | -0.8 | -3.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3164 | pnp | -0.8 | -1.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3398 | yrfF | -0.8 | -2.3 | predicted inner membrane protein (NCBI) | compare |
| b3094 | exuR | -0.8 | -2.6 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b0249 | ykfF | -0.8 | -1.8 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2281 | nuoI | -0.8 | -1.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0896 | dmsC | -0.8 | -4.2 | dimethyl sulfoxide reductase, anaerobic, subunit C (NCBI) | compare |
| b3784 | rfe | -0.8 | -6.1 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b4389 | radA | -0.8 | -4.5 | predicted repair protein (NCBI) | conserved |
| b0232 | yafN | -0.8 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2531 | iscR | -0.8 | -0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2783 | chpR | -0.8 | -1.5 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b1524 | yneH | -0.8 | -0.9 | predicted glutaminase (NCBI) | compare |
| b0009 | mog | -0.8 | -4.3 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b3071 | yqjI | -0.8 | -2.2 | predicted transcriptional regulator (NCBI) | compare |
| b2479 | gcvR | -0.8 | -2.8 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3619 | rfaD | -0.8 | -2.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3082 | ygjM | -0.8 | -0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2419 | yfeK | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b3613 | yibP | -0.7 | -1.3 | putative membrane protein (VIMSS) | compare |
| b1730 | ydjO | -0.7 | -0.4 | predicted protein (RefSeq) | compare |
| b1485 | ddpC | -0.7 | -2.2 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b2698 | recX | -0.7 | -1.7 | RecA regulator RecX (NCBI) | compare |
| b2184 | yejH | -0.7 | -4.2 | DNA damage response helicase (yejH or radD) (from data) | compare |
| b1579 | intQ | -0.7 | -0.9 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b2456 | cchB | -0.7 | -2.9 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b4509 | ylcG | -0.7 | -1.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1101 | ptsG | -0.7 | -4.5 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b1088 | yceD | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b3838 | tatB | -0.7 | -4.1 | sec-independent translocase (NCBI) | compare |
| b1667 | ydhR | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b1295 | ymjA | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b4435 | isrC | -0.7 | -1.5 | unknown RNA (NCBI) | compare |
| b2809 | b2809 | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2366 | dsdA | -0.7 | -2.4 | D-serine dehydratase (NCBI) | compare |
| b3786 | rffE | -0.7 | -4.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0317 | yahC | -0.7 | -3.3 | predicted inner membrane protein (NCBI) | compare |
| b0430 | cyoC | -0.7 | -2.2 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2085 | b2085 | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3129 | sohA | -0.7 | -2.2 | predicted regulator (NCBI) | compare |
| b3149 | yraO | -0.7 | -3.3 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b0440 | hupB | -0.7 | -2.3 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b3389 | aroB | -0.7 | -4.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b1330 | ynaI | -0.7 | -1.8 | conserved inner membrane protein (NCBI) | compare |
| b1563 | relE | -0.7 | -1.0 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b3341 | rpsG | -0.7 | -0.9 | 30S ribosomal protein S7 (NCBI) | compare |
| b3794 | rffM | -0.7 | -3.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b2283 | nuoG | -0.7 | -3.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1518 | lsrG | -0.7 | -1.2 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1643 | ydhI | -0.7 | -2.8 | predicted inner membrane protein (NCBI) | compare |
| b1824 | yobF | -0.7 | -1.7 | hypothetical protein (NCBI) | compare |
| b3871 | bipA | -0.7 | -4.4 | GTP-binding protein (NCBI) | compare |
| b0296 | ykgM | -0.7 | -2.1 | 50S ribosomal protein L31 (NCBI) | compare |
| b3836 | b3836 | -0.7 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b0450 | glnK | -0.7 | -1.5 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1861 | ruvA | -0.7 | -0.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2277 | nuoM | -0.7 | -2.7 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2819 | recD | -0.6 | -3.5 | exonuclease V (RecBCD complex), alpha chain (NCBI) | compare |
| b0092 | ddlB | -0.6 | -2.5 | D-alanylalanine synthetase (NCBI) | compare |
| b2954 | yggV | -0.6 | -2.5 | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | compare |
| b4551 | yheV | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| b2506 | yfgI | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b1758 | b1758 | -0.6 | -0.9 | putative cytochrome oxidase (VIMSS) | compare |
| b2017 | yefM | -0.6 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b4179 | vacB | -0.6 | -2.5 | putative enzyme (VIMSS) | compare |
| b1901 | araF | -0.6 | -2.2 | L-arabinose transporter subunit (NCBI) | compare |
| b4571 | wbbL | -0.6 | -1.5 | no description | compare |
| b2892 | recJ | -0.6 | -3.9 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b1201 | b1201 | -0.6 | -2.6 | putative sensor-type regulator (VIMSS) | compare |
| b1836 | yebV | -0.6 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1837 | yebW | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3476 | nikA | -0.6 | -4.0 | nickel transporter subunit (NCBI) | compare |
| b2990 | hybG | -0.6 | -1.3 | hydrogenase 2 accessory protein (NCBI) | compare |
| b1977 | asnT | -0.6 | -1.6 | tRNA-Asn (NCBI) | compare |
| b4407 | thiS | -0.6 | -0.9 | sulfur carrier protein ThiS (NCBI) | compare |
| b1195 | ymgE | -0.6 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b1505 | ydeT | -0.6 | -0.4 | hypothetical protein (RefSeq) | compare |
| b0826 | moeB | -0.6 | -2.5 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b1951 | rcsA | -0.6 | -0.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0894 | dmsA | -0.6 | -4.0 | anaerobic dimethyl sulfoxide reductase subunit A (VIMSS) | compare |
| b4642 | yoeD | -0.6 | -1.1 | no description | compare |
| b0438 | clpX | -0.6 | -2.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4595 | yciY | -0.6 | -1.0 | hypothetical protein (RefSeq) | compare |
| b1881 | cheZ | -0.6 | -2.5 | chemotaxis regulator, protein phosphatase for CheY (NCBI) | compare |
| b2736 | ygbJ | -0.6 | -1.8 | predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b1161 | ycgX | -0.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b3616 | tdh | -0.6 | -2.6 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b0827 | moeA | -0.6 | -2.3 | molybdopterin biosynthesis protein (NCBI) | compare |
| b1863 | ruvC | -0.6 | -0.6 | Holliday junction resolvase (NCBI) | compare |
| b1279 | yciS | -0.6 | -0.7 | conserved inner membrane protein (NCBI) | compare |
| b3755 | yieP | -0.6 | -2.9 | predicted transcriptional regulator (NCBI) | compare |
| b2375 | yfdX | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b3237 | argR | -0.6 | -1.9 | arginine repressor (NCBI) | compare |
| b2646 | ypjF | -0.6 | -1.5 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b3928 | yiiU | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -0.6 | -1.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2022 | hisB | -0.6 | -2.5 | imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) | compare |
| b4313 | fimE | -0.6 | -2.9 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b3147 | yraM | -0.6 | -4.3 | hypothetical protein (NCBI) | compare |
| b4240 | treB | -0.6 | -3.8 | fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) | compare |
| b1531 | marA | -0.6 | -1.3 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b4653 | yicT | -0.6 | -1.2 | no description | compare |