Experiment set9IT077 for Pseudomonas simiae WCS417

200 most detrimental genes:

gene	name	fitness	t score	description
PS417_09235		+2.2	1.5	molecular chaperone
PS417_22990		+2.0	2.6	iron dicitrate transport regulator FecR
PS417_14070		+1.9	0.8	hypothetical protein
PS417_00385		+1.8	1.9	Fur family transcriptional regulator
PS417_05965		+1.6	2.8	chemotaxis protein CheW
PS417_16950		+1.6	2.0	fimbrial protein
PS417_17780		+1.6	1.6	Ais protein
PS417_01030		+1.5	2.3	glutamine ABC transporter substrate-binding protein
PS417_14050		+1.5	2.1	recombinase
PS417_08830		+1.5	2.0	membrane protein
PS417_03875		+1.5	2.4	membrane protein
PS417_10720		+1.5	8.7	chemotaxis protein CheY
PS417_08620		+1.5	1.3	hypothetical protein
PS417_16370		+1.5	6.0	chemotaxis protein CheY
PS417_19790		+1.4	2.7	ATP synthase
PS417_20855		+1.4	2.2	hypothetical protein
PS417_19195		+1.4	2.4	hypothetical protein
PS417_26850		+1.4	1.1	twin-arginine translocation pathway signal protein
PS417_10715		+1.4	3.0	Cro/Cl family transcriptional regulator
PS417_26805		+1.4	1.1	cell division protein FtsE
PS417_24840		+1.4	1.8	hypothetical protein
PS417_08685		+1.4	2.2	flagellar hook-length control protein FliK
PS417_21955		+1.4	2.1	dehydrogenase
PS417_06845		+1.4	2.4	lipoprotein
PS417_21180		+1.4	2.7	short-chain dehydrogenase
PS417_06540		+1.3	1.4	membrane protein
PS417_03100		+1.3	1.6	pilus assembly protein
PS417_04305		+1.3	2.1	aspartate ammonia-lyase
PS417_02160		+1.3	1.6	hypothetical protein
PS417_00755		+1.3	0.7	biofilm PGA synthesis protein PgaD
PS417_20055		+1.3	2.8	cob(II)yrinic acid a,c-diamide reductase
PS417_26275		+1.2	2.9	glycine/betaine ABC transporter substrate-binding protein
PS417_17805		+1.2	2.3	microcin B17 processing protein McbC
PS417_24030		+1.2	2.5	MFS transporter
PS417_00845		+1.2	1.5	transcriptional regulator
PS417_27810		+1.2	7.0	ribonuclease PH
PS417_28315		+1.2	2.5	zinc ABC transporter permease
PS417_14125		+1.2	2.5	molybdenum ABC transporter ATP-binding protein
PS417_07770		+1.2	1.9	hypothetical protein
PS417_13075		+1.2	1.2	hypothetical protein
PS417_19500		+1.2	3.3	antibiotic synthesis protein MbtH
PS417_24370		+1.1	1.0	(2Fe-2S)-binding protein
PS417_18755		+1.1	1.1	CrtK
PS417_16560		+1.1	2.6	GNAT family acetyltransferase
PS417_13575		+1.1	2.6	succinylglutamate desuccinylase
PS417_12280		+1.1	2.0	MerR family transcriptional regulator
PS417_11900		+1.1	3.4	conjugal transfer protein TraR
PS417_04535		+1.1	2.5	lysine transporter LysE
PS417_23155		+1.1	5.6	pilus assembly protein PilW
PS417_27610		+1.1	3.2	hypothetical protein
PS417_13730		+1.1	2.0	hypothetical protein
PS417_00830		+1.1	2.9	hypothetical protein
PS417_12160		+1.1	2.2	Fis family transcriptional regulator
PS417_17680		+1.1	2.4	ABC transporter
PS417_28515		+1.1	2.3	16S rRNA methyltransferase
PS417_04440		+1.1	1.7	hypoxanthine-guanine phosphoribosyltransferase
PS417_27605		+1.1	3.8	hypothetical protein
PS417_10425		+1.1	1.3	hypothetical protein
PS417_09865		+1.0	1.3	hypothetical protein
PS417_18760		+1.0	2.4	hypothetical protein
PS417_19755		+1.0	1.5	flagellar motor switch protein FliM
PS417_25155		+1.0	1.4	hypothetical protein
PS417_26900		+1.0	1.3	L-cystine transporter tcyP
PS417_12650		+1.0	1.8	magnesium transporter
PS417_27055		+1.0	2.6	hypothetical protein
PS417_18990		+1.0	2.8	membrane protein
PS417_27290		+1.0	1.3	hypothetical protein
PS417_16520		+1.0	1.3	cold-shock protein
PS417_08090		+1.0	0.7	3-oxoacyl-ACP reductase
PS417_06735		+1.0	1.8	3-oxoadipate enol-lactonase
PS417_05850		+1.0	0.9	LysR family transcriptional regulator
PS417_02455		+1.0	2.6	putative transporter, required for glycine utilization (from data)
PS417_02055		+1.0	2.2	methyltransferase
PS417_03120		+0.9	3.2	histidine kinase
PS417_13050		+0.9	1.6	N-acetylglucosamine-6-sulfatase
PS417_11880		+0.9	2.2	oxidoreductase
PS417_18020		+0.9	1.6	hypothetical protein
PS417_14255		+0.9	2.4	phosphate import ATP-binding protein PstB
PS417_07455		+0.9	1.2	glutamine amidotransferase
PS417_09695		+0.9	1.6	hydrolase
PS417_21850		+0.9	0.8	LysR family transcriptional regulator
PS417_03340		+0.9	2.8	gluconate transporter
PS417_22175		+0.9	1.4	amino acid transporter LysE
PS417_02615		+0.9	3.1	transglutaminase
PS417_15975		+0.9	1.3	glutamate carboxypeptidase
PS417_27940		+0.9	1.3	type VI secretion protein
PS417_15035		+0.9	1.3	alkylhydroperoxidase
PS417_06420		+0.9	3.5	ATP-dependent DNA ligase
PS417_19560		+0.9	4.5	amino acid ABC transporter substrate-binding protein
PS417_15425		+0.9	1.7	acetyltransferase
PS417_15290		+0.9	1.8	type VI secretion protein
PS417_01375		+0.9	1.4	hypothetical protein
PS417_19055		+0.9	2.4	ArsR family transcriptional regulator
PS417_02705		+0.9	1.3	urease accessory protein UreF
PS417_22550		+0.9	2.3	ATP-binding protein
PS417_08320		+0.9	1.7	metal-chelation protein CHAD
PS417_17920		+0.9	2.6	nitrilotriacetate monooxygenase
PS417_04835		+0.9	2.3	hemolysin D
PS417_14825		+0.9	2.4	hypothetical protein
PS417_07280		+0.9	3.3	LysR family transcriptional regulator
PS417_26175		+0.9	0.8	sarcosine oxidase subunit gamma
PS417_23170		+0.9	1.1	FeS assembly protein IscX
PS417_10480		+0.9	1.2	glutathione S-transferase
PS417_09590		+0.9	2.4	membrane protein
PS417_00975		+0.9	0.9	hypothetical protein
PS417_27315		+0.9	0.9	hypothetical protein
PS417_09625		+0.8	1.5	sugar ABC transporter substrate-binding protein
PS417_12730		+0.8	1.1	glycosyltransferase
PS417_08200		+0.8	2.0	hypothetical protein
PS417_18630		+0.8	2.3	tRNA-dihydrouridine synthase C
PS417_23150		+0.8	2.2	Cro/Cl family transcriptional regulator
PS417_04875		+0.8	1.0	molybdenum cofactor biosynthesis protein MoaE
PS417_04525		+0.8	2.1	16S rRNA methyltransferase
PS417_06145		+0.8	0.9	hypothetical protein
PS417_16785		+0.8	2.0	ABC transporter permease
PS417_25825		+0.8	2.1	sulfurtransferase
PS417_14075		+0.8	1.2	hypothetical protein
PS417_27180		+0.8	1.8	peroxidase
PS417_06370		+0.8	1.2	cold-shock protein
PS417_01685		+0.8	2.3	membrane protein
PS417_11360		+0.8	1.9	energy transducer TonB
PS417_04530		+0.8	1.8	glycerate dehydrogenase
PS417_27945		+0.8	1.4	type VI secretion protein ImpA
PS417_18205		+0.8	1.3	aldehyde dehydrogenase
PS417_14565		+0.8	2.8	chemotaxis protein
PS417_08590		+0.8	1.6	hypothetical protein
PS417_22115		+0.8	1.9	transcriptional regulator
PS417_19730		+0.8	1.1	flagellar biosynthesis protein FliR
PS417_18780		+0.8	1.1	flavin reductase
PS417_22150		+0.8	2.6	D-mannose isomerase (EC 5.3.1.7) (from data)
PS417_19325		+0.8	1.5	hypothetical protein
PS417_06935		+0.8	3.1	hydroxymethylglutaryl-CoA lyase
PS417_07985		+0.8	1.2	AbrB family transcriptional regulator
PS417_10015		+0.8	0.9	hypothetical protein
PS417_01305		+0.8	3.2	Fis family transcriptional regulator
PS417_23580		+0.8	1.2	peptidylprolyl isomerase
PS417_03380		+0.8	0.7	hypothetical protein
PS417_20080		+0.8	1.5	peptidase P60
PS417_10865		+0.8	1.5	GNAT family acetyltransferase
PS417_24295		+0.8	1.9	carbon starvation protein A
PS417_23115		+0.8	3.7	carbon-nitrogen hydrolase
PS417_28425		+0.8	2.4	lysine transporter LysE
PS417_27770		+0.8	2.7	hypothetical protein
PS417_12820		+0.8	1.4	hypothetical protein
PS417_26390		+0.8	1.2	acyltransferase
PS417_27225		+0.8	1.7	protease
PS417_01735		+0.8	1.9	ABC transporter permease
PS417_24895		+0.8	0.7	hypothetical protein
PS417_09460		+0.8	1.2	alkanesulfonate monooxygenase
PS417_01285		+0.7	1.0	haloacid dehalogenase
PS417_04745		+0.7	2.9	fusaric acid resistance protein
PS417_05580		+0.7	2.0	glycerol uptake facilitator GlpF
PS417_01115		+0.7	0.8	serine acetyltransferase
PS417_14165		+0.7	1.7	ArsR family transcriptional regulator
PS417_10060		+0.7	1.3	hypothetical protein
PS417_26560		+0.7	2.1	amino acid dehydrogenase
PS417_07990		+0.7	1.1	endoribonuclease L-PSP
PS417_18355		+0.7	4.6	DNA-binding protein
PS417_23625		+0.7	1.3	LysR family transcriptional regulator
PS417_26265		+0.7	1.3	hypothetical protein
PS417_10810		+0.7	0.8	hypothetical protein
PS417_12545		+0.7	2.7	xanthine permease XanP
PS417_06365		+0.7	2.9	RNA polymerase sigma factor
PS417_09915		+0.7	1.2	hypothetical protein
PS417_28180		+0.7	1.9	GNAT family acetyltransferase
PS417_02095		+0.7	2.0	AMP-binding protein
PS417_21535		+0.7	1.3	chemotaxis protein CheY
PS417_16160		+0.7	1.5	ABC transporter substrate-binding protein
PS417_09440		+0.7	1.3	MerR family transcriptional regulator
PS417_22300		+0.7	0.7	LTXXQ domain protein
PS417_26790		+0.7	2.4	peptidoglycan transglycosylase
PS417_09575		+0.7	1.4	glutathione S-transferase
PS417_14840		+0.7	1.5	abortive phage infection protein
PS417_27140		+0.7	2.0	Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data)
PS417_02695		+0.7	0.8	protein hupE
PS417_01815		+0.7	2.5	peptide ABC transporter ATP-binding protein
PS417_24525		+0.7	1.3	nuclease
PS417_00370		+0.7	0.7	hypothetical protein
PS417_07700		+0.7	1.0	chromosome partitioning protein ParA
PS417_00925		+0.7	1.4	hypothetical protein
PS417_05165		+0.7	0.8	cytosol aminopeptidase
PS417_20950		+0.7	1.0	hypothetical protein
PS417_18800		+0.7	1.9	hypothetical protein
PS417_02495		+0.7	2.5	GTPase HflX
PS417_15735		+0.7	1.9	histidine kinase
PS417_21830		+0.7	1.1	TetR family transcriptional regulator
PS417_14275		+0.7	2.3	hypothetical protein
PS417_02820		+0.7	1.1	urea ABC transporter ATP-binding protein
PS417_27045		+0.7	0.9	ATPase
PS417_16860		+0.7	2.1	diadenosine tetraphosphate hydrolase
PS417_12015		+0.7	1.3	phosphoglycerate mutase
PS417_23105		+0.7	0.9	hypothetical protein
PS417_26310		+0.7	2.5	serine dehydratase
PS417_03675		+0.7	3.2	hypothetical protein
PS417_11890		+0.7	1.9	Inositol transport system ATP-binding protein (from data)
PS417_01415		+0.7	3.1	glycosyl transferase family 1
PS417_09730		+0.7	1.3	adenylylsulfate kinase
PS417_05590		+0.7	2.9	iron ABC transporter ATP-binding protein
PS417_21120		+0.7	2.1	phosphoserine phosphatase
PS417_28265		+0.7	1.2	pyridoxamine kinase

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in seeds experiments