| | gene | name | fitness | t score | description | |
|---|
| b0463 | acrA | -5.1 | -8.5 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -4.7 | -15.9 | multidrug efflux system protein (NCBI) | compare |
| b2512 | yfgL | -3.8 | -5.1 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3341 | rpsG | -3.7 | -2.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b3035 | tolC | -3.7 | -7.0 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3163 | nlpI | -3.6 | -4.3 | hypothetical protein (NCBI) | compare |
| b2378 | ddg | -3.6 | -7.5 | putative heat shock protein (VIMSS) | compare |
| b3199 | yrbK | -3.4 | -3.2 | hypothetical protein (NCBI) | compare |
| b0677 | nagA | -3.4 | -4.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0222 | lpcA | -3.3 | -3.2 | phosphoheptose isomerase (NCBI) | compare |
| b4201 | priB | -3.3 | -3.2 | primosomal replication protein N (NCBI) | compare |
| b0178 | hlpA | -3.2 | -5.7 | periplasmic chaperone (NCBI) | compare |
| b3052 | rfaE | -3.2 | -3.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4238 | nrdD | -3.0 | -17.9 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b1677 | lpp | -3.0 | -3.4 | murein lipoprotein (NCBI) | compare |
| b4237 | nrdG | -3.0 | -11.4 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b0957 | ompA | -3.0 | -4.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2617 | smpA | -2.9 | -3.8 | small membrane protein A (VIMSS) | compare |
| b1830 | prc | -2.8 | -4.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0053 | surA | -2.7 | -3.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3842 | rfaH | -2.6 | -4.8 | transcriptional activator RfaH (NCBI) | compare |
| b4509 | ylcG | -2.5 | -3.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b4025 | pgi | -2.5 | -8.8 | glucose-6-phosphate isomerase (NCBI) | compare |
| b0049 | apaH | -2.5 | -2.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b1429 | tehA | -2.5 | -2.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2188 | yejM | -2.5 | -10.4 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0145 | dksA | -2.5 | -2.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3632 | rfaQ | -2.3 | -15.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3620 | rfaF | -2.2 | -3.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3630 | rfaP | -2.1 | -4.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1185 | dsbB | -2.1 | -3.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1855 | lpxM | -2.1 | -5.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b4592 | yccB | -2.1 | -2.5 | hypothetical protein (RefSeq) | compare |
| b3619 | rfaD | -2.0 | -2.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2419 | yfeK | -2.0 | -3.1 | hypothetical protein (NCBI) | compare |
| b0683 | fur | -1.9 | -1.7 | ferric uptake regulator (NCBI) | compare |
| b3631 | rfaG | -1.9 | -10.1 | glucosyltransferase I (NCBI) | compare |
| b3621 | rfaC | -1.9 | -3.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0014 | dnaK | -1.8 | -2.3 | molecular chaperone DnaK (NCBI) | compare |
| b0902 | pflA | -1.7 | -6.8 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b3195 | yrbF | -1.7 | -9.3 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2494 | yfgC | -1.7 | -6.9 | predicted peptidase (NCBI) | compare |
| b2572 | rseA | -1.6 | -4.1 | anti-sigma factor (NCBI) | compare |
| b2859 | ygeO | -1.6 | -1.5 | hypothetical protein (RefSeq) | compare |
| b0623 | cspE | -1.6 | -2.2 | cold shock protein E (NCBI) | compare |
| b0740 | tolB | -1.6 | -3.5 | translocation protein TolB precursor (NCBI) | compare |
| b2064 | asmA | -1.5 | -5.1 | predicted assembly protein (NCBI) | compare |
| b0739 | tolA | -1.5 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1249 | cls | -1.5 | -5.7 | cardiolipin synthetase (NCBI) | compare |
| b3002 | yqhA | -1.5 | -2.7 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -1.5 | -3.1 | export protein SecB (NCBI) | compare |
| b3839 | tatC | -1.5 | -5.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1506 | yneL | -1.5 | -1.3 | predicted transcriptional regulator (NCBI) | compare |
| b0688 | pgm | -1.5 | -2.8 | phosphoglucomutase (NCBI) | compare |
| b4535 | yniD | -1.5 | -1.6 | predicted protein (RefSeq) | compare |
| b1334 | fnr | -1.5 | -2.5 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2346 | vacJ | -1.4 | -6.5 | predicted lipoprotein (NCBI) | compare |
| b4402 | yjjY | -1.4 | -1.2 | hypothetical protein (NCBI) | compare |
| b0741 | pal | -1.4 | -3.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4702 | mgtL | -1.4 | -1.7 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3194 | yrbE | -1.4 | -7.8 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1348 | lar | -1.4 | -1.6 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3935 | priA | -1.3 | -2.6 | primosome assembly protein PriA (NCBI) | compare |
| b0738 | tolR | -1.3 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3026 | qseC | -1.3 | -1.9 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3192 | yrbC | -1.3 | -6.7 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0903 | pflB | -1.3 | -8.0 | pyruvate formate lyase I (NCBI) | compare |
| b0737 | tolQ | -1.3 | -2.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1438 | ydcQ | -1.3 | -2.5 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1161 | ycgX | -1.2 | -0.8 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | -1.2 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0547 | ybcN | -1.2 | -2.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1236 | galU | -1.2 | -2.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1279 | yciS | -1.2 | -1.2 | conserved inner membrane protein (NCBI) | compare |
| b3021 | ygiT | -1.2 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0550 | rusA | -1.2 | -2.5 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b2174 | b2174 | -1.2 | -6.0 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -1.2 | -2.6 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3193 | yrbD | -1.2 | -6.3 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2085 | b2085 | -1.1 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -1.1 | -1.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2215 | ompC | -1.1 | -5.0 | outer membrane porin protein C (NCBI) | compare |
| b4701 | sokX | -1.1 | -0.7 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1108 | ycfP | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4699 | fnrS | -1.1 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1763 | topB | -1.1 | -3.7 | DNA topoisomerase III (NCBI) | compare |
| b2571 | rseB | -1.1 | -5.2 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b2814 | metZ | -1.1 | -1.3 | tRNA-Met (NCBI) | compare |
| b2939 | yqgB | -1.1 | -1.3 | predicted protein (RefSeq) | compare |
| b4589 | ylcI | -1.1 | -2.4 | hypothetical protein (RefSeq) | compare |
| b1527 | yneK | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b1642 | slyA | -1.0 | -1.7 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1104 | ycfL | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b2165 | yeiN | -1.0 | -3.4 | hypothetical protein (NCBI) | compare |
| b4570 | lomR | -1.0 | -1.3 | no description | compare |
| b0548 | ninE | -1.0 | -1.5 | DLP12 prophage; conserved protein (NCBI) | compare |
| b0990 | cspG | -1.0 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4221 | ytfN | -1.0 | -8.0 | hypothetical protein (NCBI) | compare |
| b0296 | ykgM | -1.0 | -2.2 | 50S ribosomal protein L31 (NCBI) | compare |
| b0814 | ompX | -1.0 | -3.0 | outer membrane protein X (NCBI) | compare |
| b1125 | potB | -1.0 | -3.1 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b4220 | ytfM | -1.0 | -6.8 | predicted outer membrane protein and surface antigen (NCBI) | compare |
| b3860 | dsbA | -1.0 | -5.0 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0226 | dinJ | -0.9 | -3.3 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3237 | argR | -0.9 | -2.9 | arginine repressor (NCBI) | compare |
| b0239 | frsA | -0.9 | -5.3 | fermentation/respiration switch protein (NCBI) | compare |
| b4218 | ytfL | -0.9 | -5.6 | predicted inner membrane protein (NCBI) | compare |
| b3790 | rffC | -0.9 | -3.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1346 | ydaQ | -0.9 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2168 | fruK | -0.9 | -0.8 | 1-phosphofructokinase (NCBI) | compare |
| b1620 | malI | -0.9 | -1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1085 | b1085 | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1563 | relE | -0.9 | -1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b2531 | iscR | -0.9 | -0.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2783 | chpR | -0.9 | -1.8 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b0386 | proC | -0.9 | -2.9 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1969 | yedW | -0.9 | -1.5 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b0767 | ybhE | -0.8 | -2.4 | 6-phosphogluconolactonase (NCBI) | compare |
| b2221 | atoD | -0.8 | -1.8 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b2784 | relA | -0.8 | -4.9 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b2369 | evgA | -0.8 | -1.2 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b0232 | yafN | -0.8 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3082 | ygjM | -0.8 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1730 | ydjO | -0.8 | -0.5 | predicted protein (RefSeq) | compare |
| b3600 | mtlD | -0.8 | -5.5 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b0436 | tig | -0.8 | -4.4 | trigger factor (NCBI) | compare |
| b3784 | rfe | -0.8 | -5.9 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1503 | ydeR | -0.8 | -1.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4046 | yjbK | -0.8 | -2.9 | putative regulator (VIMSS) | compare |
| b3162 | deaD | -0.8 | -2.1 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4233 | mpl | -0.8 | -5.2 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) | compare |
| b1252 | tonB | -0.8 | -1.8 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4096 | phnL | -0.8 | -2.5 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1150 | ymfR | -0.8 | -0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b2620 | smpB | -0.8 | -0.8 | SsrA-binding protein (NCBI) | compare |
| b3930 | menA | -0.8 | -5.9 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3741 | gidA | -0.8 | -2.1 | glucose-inhibited division protein A (NCBI) | compare |
| b0881 | clpS | -0.8 | -1.2 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1692 | ydiB | -0.8 | -1.5 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b3726 | pstA | -0.8 | -2.4 | phosphate transporter subunit (NCBI) | compare |
| b1482 | osmC | -0.7 | -1.1 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1951 | rcsA | -0.7 | -0.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1241 | adhE | -0.7 | -4.5 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b3836 | b3836 | -0.7 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1769 | ydjE | -0.7 | -2.8 | predicted transporter (NCBI) | compare |
| b4608 | ryfC | -0.7 | -1.7 | Novel sRNA, function unknown (RefSeq) | compare |
| b3068 | ygjF | -0.7 | -2.0 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b4203 | rplI | -0.7 | -2.3 | 50S ribosomal protein L9 (NCBI) | compare |
| b1575 | dicB | -0.7 | -0.8 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2576 | srmB | -0.7 | -1.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b1689 | b1689 | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3803 | hemX | -0.7 | -4.8 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b1556 | b1556 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3792 | wzxE | -0.7 | -3.2 | O-antigen translocase (NCBI) | compare |
| b3616 | tdh | -0.7 | -2.9 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1789 | yeaL | -0.7 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b3863 | polA | -0.7 | -0.6 | DNA polymerase I (NCBI) | compare |
| b3563 | yiaB | -0.7 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1818 | manY | -0.7 | -1.4 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b4558 | yifL | -0.7 | -3.2 | predicted lipoprotein (NCBI) | compare |
| b3761 | trpT | -0.7 | -1.2 | tRNA-Trp (NCBI) | compare |
| b4341 | yjiS | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b1600 | mdtJ | -0.7 | -0.8 | multidrug efflux system transporter (NCBI) | compare |
| b0679 | nagE | -0.7 | -4.7 | fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components (NCBI) | compare |
| b2937 | speB | -0.7 | -3.3 | agmatinase (NCBI) | compare |
| b2808 | gcvA | -0.7 | -1.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1595 | ynfL | -0.7 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4441 | glmY | -0.7 | -1.1 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1290 | sapF | -0.7 | -1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1344 | ydaO | -0.7 | -1.4 | predicted C32 tRNA thiolase (NCBI) | compare |
| b3706 | trmE | -0.7 | -1.8 | tRNA modification GTPase (NCBI) | compare |
| b3786 | rffE | -0.7 | -4.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3129 | sohA | -0.7 | -1.7 | predicted regulator (NCBI) | compare |
| b4594 | ymgJ | -0.7 | -1.0 | hypothetical protein (RefSeq) | compare |
| b1579 | intQ | -0.6 | -1.0 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b1480 | sra | -0.6 | -0.5 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b0009 | mog | -0.6 | -3.6 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b2144 | sanA | -0.6 | -4.2 | hypothetical protein (NCBI) | compare |
| b0890 | ftsK | -0.6 | -1.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4416 | rybA | -0.6 | -0.8 | unknown RNA (NCBI) | compare |
| b1693 | aroD | -0.6 | -2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3838 | tatB | -0.6 | -3.1 | sec-independent translocase (NCBI) | compare |
| b1407 | ydbD | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2354 | yfdK | -0.6 | -2.2 | CPS-53 (KpLE1) prophage; conserved protein (NCBI) | compare |
| b0317 | yahC | -0.6 | -3.1 | predicted inner membrane protein (NCBI) | compare |
| b4431 | rprA | -0.6 | -1.1 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b4451 | ryhB | -0.6 | -0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b3963 | fabR | -0.6 | -4.0 | DNA-binding transcriptional repressor (RefSeq) | compare |
| b1258 | yciF | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b4520 | ymgF | -0.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b0904 | focA | -0.6 | -3.1 | formate transporter (NCBI) | compare |
| b1192 | ldcA | -0.6 | -2.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b3405 | ompR | -0.6 | -2.3 | osmolarity response regulator (NCBI) | compare |
| b3387 | dam | -0.6 | -4.1 | DNA adenine methylase (NCBI) | compare |
| b3147 | yraM | -0.6 | -4.6 | hypothetical protein (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b1961 | dcm | -0.6 | -1.0 | DNA cytosine methylase (NCBI) | compare |
| b2792 | yqcC | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b1727 | yniC | -0.6 | -0.8 | predicted hydrolase (NCBI) | compare |
| b4045 | yjbJ | -0.6 | -1.5 | predicted stress response protein (NCBI) | compare |