| | gene | name | fitness | t score | description | |
|---|
| b0902 | pflA | -5.3 | -7.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0903 | pflB | -5.1 | -9.1 | pyruvate formate lyase I (NCBI) | compare |
| b1334 | fnr | -3.8 | -3.6 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4237 | nrdG | -3.7 | -10.6 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -3.5 | -20.2 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b0049 | apaH | -3.2 | -2.2 | diadenosinetetraphosphatase (NCBI) | compare |
| b2784 | relA | -3.1 | -10.6 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0053 | surA | -2.9 | -3.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3292 | zntR | -2.8 | -3.2 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b4025 | pgi | -2.6 | -9.9 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3052 | rfaE | -2.6 | -5.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3792 | wzxE | -2.6 | -6.3 | O-antigen translocase (NCBI) | compare |
| b1429 | tehA | -2.5 | -2.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0737 | tolQ | -2.4 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1865 | nudB | -2.4 | -2.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3390 | aroK | -2.4 | -2.2 | shikimate kinase I (NCBI) | compare |
| b3469 | zntA | -2.4 | -3.9 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b2528 | iscA | -2.4 | -2.6 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0740 | tolB | -2.4 | -3.8 | translocation protein TolB precursor (NCBI) | compare |
| b0484 | copA | -2.3 | -13.8 | copper transporter (NCBI) | compare |
| b3839 | tatC | -2.3 | -7.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4402 | yjjY | -2.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b3229 | sspA | -2.3 | -3.0 | stringent starvation protein A (NCBI) | compare |
| b2506 | yfgI | -2.2 | -3.5 | hypothetical protein (NCBI) | compare |
| b1984 | asnW | -2.2 | -1.4 | tRNA-Asn (NCBI) | compare |
| b3790 | rffC | -2.2 | -7.2 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0212 | gloB | -2.2 | -4.2 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b4535 | yniD | -2.2 | -1.4 | predicted protein (RefSeq) | compare |
| b0406 | tgt | -2.1 | -7.4 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3409 | feoB | -2.1 | -16.5 | ferrous iron transport protein B (NCBI) | compare |
| b0683 | fur | -2.1 | -1.9 | ferric uptake regulator (NCBI) | compare |
| b3787 | rffD | -2.1 | -11.7 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3784 | rfe | -2.0 | -13.7 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0741 | pal | -2.0 | -3.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3408 | feoA | -2.0 | -11.6 | ferrous iron transport protein A (NCBI) | compare |
| b2576 | srmB | -2.0 | -3.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b2553 | glnB | -2.0 | -5.0 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0677 | nagA | -2.0 | -6.2 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3930 | menA | -1.9 | -14.2 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3341 | rpsG | -1.9 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b4481 | rffT | -1.9 | -7.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3794 | rffM | -1.9 | -8.2 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3786 | rffE | -1.8 | -12.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0438 | clpX | -1.8 | -6.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0222 | lpcA | -1.8 | -3.1 | phosphoheptose isomerase (NCBI) | compare |
| b3791 | rffA | -1.8 | -8.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0739 | tolA | -1.8 | -2.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1503 | ydeR | -1.8 | -2.8 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2479 | gcvR | -1.8 | -5.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0688 | pgm | -1.8 | -3.4 | phosphoglucomutase (NCBI) | compare |
| b0437 | clpP | -1.8 | -5.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3163 | nlpI | -1.7 | -5.1 | hypothetical protein (NCBI) | compare |
| b3621 | rfaC | -1.7 | -4.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4589 | ylcI | -1.7 | -3.5 | hypothetical protein (RefSeq) | compare |
| b3619 | rfaD | -1.7 | -3.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1936 | intG | -1.7 | -1.1 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3631 | rfaG | -1.7 | -11.0 | glucosyltransferase I (NCBI) | compare |
| b2512 | yfgL | -1.7 | -5.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3620 | rfaF | -1.7 | -4.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0080 | fruR | -1.7 | -6.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4042 | dgkA | -1.7 | -2.2 | diacylglycerol kinase (NCBI) | compare |
| b0082 | mraW | -1.7 | -3.5 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3630 | rfaP | -1.7 | -7.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3842 | rfaH | -1.6 | -5.3 | transcriptional activator RfaH (NCBI) | compare |
| b1882 | cheY | -1.6 | -0.7 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0730 | mngR | -1.6 | -1.1 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1183 | umuD | -1.6 | -2.4 | DNA polymerase V, subunit D (NCBI) | compare |
| b3838 | tatB | -1.6 | -7.8 | sec-independent translocase (NCBI) | compare |
| b1677 | lpp | -1.6 | -2.7 | murein lipoprotein (NCBI) | compare |
| b0738 | tolR | -1.6 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0178 | hlpA | -1.5 | -4.1 | periplasmic chaperone (NCBI) | compare |
| b3035 | tolC | -1.5 | -7.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1506 | yneL | -1.5 | -1.3 | predicted transcriptional regulator (NCBI) | compare |
| b0357 | yaiN | -1.5 | -2.3 | putative alpha helix chain (VIMSS) | compare |
| b1949 | fliQ | -1.5 | -1.9 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1049 | mdoH | -1.5 | -7.6 | glucosyltransferase MdoH (NCBI) | compare |
| b3649 | rpoZ | -1.5 | -3.1 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3916 | pfkA | -1.5 | -1.4 | 6-phosphofructokinase (NCBI) | compare |
| b2175 | spr | -1.5 | -3.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3726 | pstA | -1.5 | -4.1 | phosphate transporter subunit (NCBI) | compare |
| b2424 | cysU | -1.5 | -2.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3755 | yieP | -1.4 | -7.3 | predicted transcriptional regulator (NCBI) | compare |
| b4178 | yjeB | -1.4 | -4.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2897 | ygfY | -1.4 | -4.0 | hypothetical protein (NCBI) | compare |
| b0237 | pepD | -1.4 | -6.9 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b0226 | dinJ | -1.4 | -3.0 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0439 | lon | -1.4 | -3.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0722 | sdhD | -1.4 | -4.6 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4519 | icdC | -1.4 | -4.0 | no description | compare |
| b4702 | mgtL | -1.4 | -1.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3742 | mioC | -1.4 | -3.9 | flavodoxin (NCBI) | compare |
| b0014 | dnaK | -1.4 | -1.9 | molecular chaperone DnaK (NCBI) | compare |
| b1482 | osmC | -1.4 | -2.0 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3204 | ptsN | -1.4 | -4.7 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2286 | nuoC | -1.4 | -4.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2288 | nuoA | -1.3 | -3.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3349 | slyD | -1.3 | -6.2 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b0471 | ybaB | -1.3 | -3.1 | hypothetical protein (NCBI) | compare |
| b2168 | fruK | -1.3 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b2276 | nuoN | -1.3 | -4.9 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3493 | pitA | -1.3 | -5.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b1192 | ldcA | -1.3 | -4.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b1236 | galU | -1.3 | -3.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3290 | trkA | -1.2 | -0.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1693 | aroD | -1.2 | -5.0 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0101 | yacG | -1.2 | -3.1 | zinc-binding protein (NCBI) | compare |
| b4383 | deoB | -1.2 | -7.0 | phosphopentomutase (NCBI) | compare |
| b1291 | sapD | -1.2 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0450 | glnK | -1.2 | -2.7 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1235 | rssB | -1.2 | -5.5 | response regulator of RpoS (NCBI) | compare |
| b4570 | lomR | -1.2 | -1.5 | no description | compare |
| b1948 | fliP | -1.2 | -4.2 | flagellar biosynthesis protein P (NCBI) | compare |
| b3500 | gor | -1.2 | -1.3 | glutathione reductase (NCBI) | compare |
| b1881 | cheZ | -1.2 | -3.5 | chemotaxis regulator, protein phosphatase for CheY (NCBI) | compare |
| b1438 | ydcQ | -1.2 | -3.5 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0827 | moeA | -1.2 | -3.8 | molybdopterin biosynthesis protein (NCBI) | compare |
| b1940 | fliH | -1.2 | -4.2 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b1048 | mdoG | -1.2 | -4.3 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3727 | pstC | -1.2 | -5.0 | phosphate transporter subunit (NCBI) | compare |
| b3867 | hemN | -1.2 | -8.6 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b3205 | yhbJ | -1.2 | -3.2 | hypothetical protein (NCBI) | compare |
| b1892 | flhD | -1.2 | -4.3 | DNA-binding transcriptional dual regulator with FlhC (RefSeq) | compare |
| b2398 | yfeC | -1.2 | -3.4 | orf, hypothetical protein (VIMSS) | compare |
| b2948 | yqgE | -1.2 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b2895 | fldB | -1.1 | -2.6 | flavodoxin 2 (NCBI) | compare |
| b1830 | prc | -1.1 | -3.6 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3183 | obgE | -1.1 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1942 | fliJ | -1.1 | -1.2 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1922 | fliA | -1.1 | -4.4 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b3387 | dam | -1.1 | -7.3 | DNA adenine methylase (NCBI) | compare |
| b2990 | hybG | -1.1 | -1.8 | hydrogenase 2 accessory protein (NCBI) | compare |
| b2363 | yfdT | -1.1 | -1.6 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2830 | nudH | -1.1 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1298 | ycjL | -1.1 | -2.2 | probable amidotransferase subunit (VIMSS) | compare |
| b3237 | argR | -1.1 | -3.5 | arginine repressor (NCBI) | compare |
| b0051 | ksgA | -1.1 | -3.1 | dimethyladenosine transferase (NCBI) | compare |
| b4416 | rybA | -1.1 | -1.1 | unknown RNA (NCBI) | compare |
| b4503 | yafF | -1.1 | -0.9 | no description | compare |
| b0149 | mrcB | -1.1 | -7.9 | penicillin-binding protein 1b (NCBI) | compare |
| b1938 | fliF | -1.1 | -5.4 | flagellar M-ring protein (NCBI) | compare |
| b0239 | frsA | -1.1 | -5.6 | fermentation/respiration switch protein (NCBI) | compare |
| b4181 | yjfI | -1.1 | -2.3 | hypothetical protein (NCBI) | compare |
| b2498 | upp | -1.1 | -2.5 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0548 | ninE | -1.1 | -2.5 | DLP12 prophage; conserved protein (NCBI) | compare |
| b3728 | pstS | -1.1 | -1.8 | phosphate transporter subunit (NCBI) | compare |
| b1286 | rnb | -1.1 | -1.8 | exoribonuclease II (NCBI) | compare |
| b0764 | modB | -1.1 | -3.7 | molybdate ABC transporter permease protein (NCBI) | compare |
| b2330 | yfcB | -1.1 | -0.9 | putative adenine-specific methylase (VIMSS) | compare |
| b0386 | proC | -1.1 | -3.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1923 | fliC | -1.1 | -5.4 | flagellin (NCBI) | compare |
| b3094 | exuR | -1.1 | -4.4 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b1083 | flgL | -1.1 | -3.8 | flagellar hook-associated protein L (NCBI) | compare |
| b0721 | sdhC | -1.1 | -3.0 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2707 | srlR | -1.1 | -3.6 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b3162 | deaD | -1.1 | -2.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3803 | hemX | -1.1 | -7.2 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b3741 | gidA | -1.1 | -2.6 | glucose-inhibited division protein A (NCBI) | compare |
| b2142 | yohK | -1.1 | -4.7 | predicted inner membrane protein (NCBI) | compare |
| b1090 | plsX | -1.1 | -4.3 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b1634 | tppB | -1.1 | -3.7 | putative tripeptide transporter permease (NCBI) | compare |
| b3405 | ompR | -1.1 | -3.6 | osmolarity response regulator (NCBI) | compare |
| b3226 | yhcK | -1.1 | -3.9 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2281 | nuoI | -1.1 | -2.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0888 | trxB | -1.1 | -2.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b4179 | vacB | -1.1 | -4.0 | putative enzyme (VIMSS) | compare |
| b2283 | nuoG | -1.0 | -5.1 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4431 | rprA | -1.0 | -1.5 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3609 | secB | -1.0 | -3.6 | export protein SecB (NCBI) | compare |
| b3281 | aroE | -1.0 | -7.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1073 | flgB | -1.0 | -3.8 | flagellar basal-body rod protein B (NCBI) | compare |
| b2318 | truA | -1.0 | -2.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3002 | yqhA | -1.0 | -2.1 | hypothetical protein (NCBI) | compare |
| b1850 | eda | -1.0 | -1.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2215 | ompC | -1.0 | -5.9 | outer membrane porin protein C (NCBI) | compare |
| b1945 | fliM | -1.0 | -4.7 | flagellar motor switch protein M (NCBI) | compare |
| b3389 | aroB | -1.0 | -6.7 | 3-dehydroquinate synthase (NCBI) | compare |
| b4180 | rlmB | -1.0 | -4.9 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b1946 | fliN | -1.0 | -3.4 | flagellar motor switch protein (NCBI) | compare |
| b4232 | fbp | -1.0 | -6.4 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b1150 | ymfR | -1.0 | -0.9 | e14 prophage; predicted protein (NCBI) | compare |
| b4184 | yjfL | -1.0 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b0826 | moeB | -1.0 | -5.1 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b3026 | qseC | -1.0 | -1.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1889 | motB | -1.0 | -3.2 | flagellar motor protein MotB (NCBI) | compare |
| b1726 | yniB | -1.0 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b2362 | yfdS | -1.0 | -3.5 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1095 | fabF | -1.0 | -4.5 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3870 | glnA | -1.0 | -2.3 | glutamine synthetase (NCBI) | compare |
| b1358 | ydaT | -1.0 | -1.0 | Rac prophage; predicted protein (NCBI) | compare |
| b2277 | nuoM | -1.0 | -3.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2951 | yggS | -1.0 | -3.7 | predicted enzyme (NCBI) | compare |
| b0908 | aroA | -1.0 | -5.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2620 | smpB | -1.0 | -1.0 | SsrA-binding protein (NCBI) | compare |
| b2216 | rcsD | -0.9 | -5.9 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | compare |
| b2284 | nuoF | -0.9 | -3.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0142 | folK | -0.9 | -0.4 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3627 | rfaI | -0.9 | -5.2 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b0928 | aspC | -0.9 | -4.7 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1255 | yciC | -0.9 | -2.5 | hypothetical protein (NCBI) | compare |
| b2456 | cchB | -0.9 | -3.0 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |