Experiment set9IT054 for Escherichia coli BW25113
LB Anaerobic with Irgasan 0.000000625 mM
Group: stressMedia: LB + Irgasan (6.25E-04 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 8 genes in this experiment
For stress Irgasan in Escherichia coli BW25113
For stress Irgasan across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Respiratory dehydrogenases 1 | 3 |
| Glycerol and Glycerol-3-phosphate Uptake and Utilization | 2 |
| Glycerolipid and Glycerophospholipid Metabolism in Bacteria | 2 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| nitrate reduction IX (dissimilatory) | 2 | 2 | 1 |
| glycerol-3-phosphate to fumarate electron transfer | 2 | 2 | 1 |
| glycerol-3-phosphate to hydrogen peroxide electron transport | 2 | 2 | 1 |
| glycerophosphodiester degradation | 2 | 2 | 1 |
| glycerol-3-phosphate shuttle | 2 | 2 | 1 |
| glycerol-3-phosphate to cytochrome bo oxidase electron transfer | 2 | 1 | 1 |
| glycerol 3-phosphate to cytochrome aa3 oxidase electron transfer | 2 | 1 | 1 |
| glycerol degradation I | 3 | 3 | 1 |
| sn-glycerol 3-phosphate anaerobic respiration | 3 | 3 | 1 |
| alkane biosynthesis I | 3 | 1 | 1 |
| heptadecane biosynthesis | 3 | 1 | 1 |
| glycerol and glycerophosphodiester degradation | 4 | 4 | 1 |
| phosphatidylcholine acyl editing | 4 | 2 | 1 |
| phospholipases | 5 | 1 | 1 |
| mycobactin biosynthesis | 11 | 3 | 1 |
| anandamide biosynthesis I | 12 | 4 | 1 |