Experiment set9IT052 for Escherichia coli BW25113

Compare to:

LB Anaerobic with Nitrofurantoin 0.000015625 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b4058 uvrA -4.3 -19.9 excinuclease ABC subunit A (NCBI) conserved
b0779 uvrB -4.1 -10.5 excinuclease ABC subunit B (NCBI) conserved
b0472 recR -3.5 -9.3 recombination protein RecR (NCBI) conserved
b2565 recO -3.5 -7.0 DNA repair protein RecO (NCBI) conserved
b1913 uvrC -3.2 -8.7 excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) conserved
b3700 recF -3.0 -13.0 recombination protein F (NCBI) conserved
b3617 kbl -2.5 -7.5 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) compare
b3253 yhdH -2.3 -9.8 predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) compare
b4138 dcuA -2.2 -10.6 C4-dicarboxylate antiporter (NCBI) compare
b0826 moeB -2.1 -6.5 molybdopterin biosynthesis protein MoeB (NCBI) compare
b3408 feoA -1.8 -10.4 ferrous iron transport protein A (NCBI) compare
b3409 feoB -1.8 -13.4 ferrous iron transport protein B (NCBI) compare
b4260 pepA -1.8 -9.9 leucyl aminopeptidase (NCBI) compare
b2261 menC -1.8 -5.9 O-succinylbenzoate synthase (NCBI) compare
b2243 glpC -1.6 -6.6 sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) compare
b3349 slyD -1.5 -5.8 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) compare
b4153 frdB -1.4 -5.4 fumarate reductase (anaerobic), Fe-S subunit (NCBI) compare
b2241 glpA -1.4 -8.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI) compare
b2260 menE -1.0 -5.3 O-succinylbenzoic acid--CoA ligase (NCBI) compare
b3745 yieM +1.1 9.1 predicted von Willibrand factor containing protein (NCBI) compare
b3915 fieF +1.3 8.2 ferrous iron efflux protein F (NCBI) compare
b2708 gutQ +1.9 7.6 orf, hypothetical protein (VIMSS) compare


Specific phenotypes for stress Nitrofurantoin across organisms