| | gene | name | fitness | t score | description | |
|---|
| b1105 | ycfM | -3.8 | -5.1 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1192 | ldcA | -3.8 | -6.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b0149 | mrcB | -3.6 | -13.6 | penicillin-binding protein 1b (NCBI) | compare |
| b1865 | nudB | -3.6 | -2.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b4592 | yccB | -3.2 | -3.3 | hypothetical protein (RefSeq) | compare |
| b0920 | ycbC | -2.6 | -5.2 | conserved inner membrane protein (NCBI) | compare |
| b0728 | sucC | -2.6 | -8.2 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0053 | surA | -2.5 | -5.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0729 | sucD | -2.2 | -4.4 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0737 | tolQ | -2.2 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4237 | nrdG | -2.0 | -9.4 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b1429 | tehA | -2.0 | -2.2 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0740 | tolB | -2.0 | -4.2 | translocation protein TolB precursor (NCBI) | compare |
| b4238 | nrdD | -1.9 | -13.7 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b1765 | ydjA | -1.9 | -1.7 | predicted oxidoreductase (NCBI) | compare |
| b2506 | yfgI | -1.8 | -3.1 | hypothetical protein (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.8 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0741 | pal | -1.7 | -3.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4535 | yniD | -1.6 | -1.6 | predicted protein (RefSeq) | compare |
| b3839 | tatC | -1.6 | -6.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1847 | yebF | -1.5 | -1.9 | predicted protein (RefSeq) | compare |
| b0641 | rlpB | -1.5 | -3.1 | minor lipoprotein (NCBI) | compare |
| b3609 | secB | -1.5 | -3.5 | export protein SecB (NCBI) | compare |
| b1830 | prc | -1.4 | -4.3 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1334 | fnr | -1.4 | -2.6 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3443 | yrhA | -1.4 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4025 | pgi | -1.4 | -7.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2393 | nupC | -1.4 | -6.0 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3163 | nlpI | -1.4 | -3.9 | hypothetical protein (NCBI) | compare |
| b0957 | ompA | -1.3 | -3.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2501 | ppk | -1.3 | -6.9 | polyphosphate kinase (NCBI) | compare |
| b4201 | priB | -1.3 | -2.0 | primosomal replication protein N (NCBI) | compare |
| b1217 | chaB | -1.3 | -1.6 | cation transport regulator (NCBI) | compare |
| b1252 | tonB | -1.3 | -2.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0765 | modC | -1.3 | -5.1 | molybdate transporter subunit (NCBI) | compare |
| b4407 | thiS | -1.3 | -2.4 | sulfur carrier protein ThiS (NCBI) | compare |
| b3237 | argR | -1.2 | -3.7 | arginine repressor (NCBI) | compare |
| b3792 | wzxE | -1.2 | -5.3 | O-antigen translocase (NCBI) | compare |
| b1361 | ydaW | -1.2 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0462 | acrB | -1.2 | -9.6 | multidrug efflux system protein (NCBI) | compare |
| b2175 | spr | -1.2 | -3.3 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0049 | apaH | -1.2 | -2.6 | diadenosinetetraphosphatase (NCBI) | compare |
| b1493 | gadB | -1.2 | -0.8 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1434 | ydcN | -1.2 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2343 | b2343 | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1739 | osmE | -1.2 | -2.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b0239 | frsA | -1.1 | -6.4 | fermentation/respiration switch protein (NCBI) | compare |
| b3341 | rpsG | -1.1 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b1642 | slyA | -1.1 | -1.3 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0763 | modA | -1.1 | -4.0 | molybdate transporter subunit (NCBI) | compare |
| b0827 | moeA | -1.1 | -3.4 | molybdopterin biosynthesis protein (NCBI) | compare |
| b4453 | ldrD | -1.0 | -1.2 | toxic polypeptide, small (NCBI) | compare |
| b4503 | yafF | -1.0 | -0.9 | no description | compare |
| b3857 | mobA | -1.0 | -4.1 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b3838 | tatB | -1.0 | -5.6 | sec-independent translocase (NCBI) | compare |
| b3836 | b3836 | -1.0 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1108 | ycfP | -1.0 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0781 | moaA | -1.0 | -4.9 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b0463 | acrA | -1.0 | -6.2 | multidrug efflux system (NCBI) | compare |
| b0903 | pflB | -1.0 | -6.7 | pyruvate formate lyase I (NCBI) | compare |
| b3930 | menA | -1.0 | -7.7 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b4596 | yciZ | -1.0 | -1.7 | hypothetical protein (RefSeq) | compare |
| b3863 | polA | -1.0 | -0.6 | DNA polymerase I (NCBI) | compare |
| b2859 | ygeO | -1.0 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0902 | pflA | -1.0 | -4.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1818 | manY | -0.9 | -1.5 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b2446 | yffO | -0.9 | -1.9 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b4508 | peaD | -0.9 | -3.2 | putative sensory transduction regulator (VIMSS) | compare |
| b4529 | ydbJ | -0.9 | -1.1 | hypothetical protein (NCBI) | compare |
| b1524 | yneH | -0.9 | -0.9 | predicted glutaminase (NCBI) | compare |
| b0142 | folK | -0.9 | -0.4 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0232 | yafN | -0.9 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1084 | rne | -0.9 | -2.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1936 | intG | -0.9 | -0.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3794 | rffM | -0.9 | -4.0 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b4181 | yjfI | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | -0.8 | -0.5 | predicted protein (RefSeq) | compare |
| b1238 | tdk | -0.8 | -2.3 | thymidine kinase (NCBI) | compare |
| b3469 | zntA | -0.8 | -3.7 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b2804 | fucU | -0.8 | -1.8 | L-fucose mutarotase (NCBI) | compare |
| b2512 | yfgL | -0.8 | -3.5 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1125 | potB | -0.8 | -2.8 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2263 | yfbB | -0.8 | -1.6 | predicted peptidase (NCBI) | compare |
| b1346 | ydaQ | -0.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | -0.8 | -1.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2369 | evgA | -0.8 | -1.3 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b1575 | dicB | -0.8 | -0.8 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1506 | yneL | -0.8 | -0.9 | predicted transcriptional regulator (NCBI) | compare |
| b3035 | tolC | -0.8 | -4.4 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0683 | fur | -0.8 | -0.9 | ferric uptake regulator (NCBI) | compare |
| b1355 | b1355 | -0.8 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3387 | dam | -0.8 | -5.2 | DNA adenine methylase (NCBI) | compare |
| b0226 | dinJ | -0.8 | -3.2 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2258 | b2258 | -0.8 | -1.1 | putative transport/receptor protein (VIMSS) | compare |
| b1984 | asnW | -0.8 | -0.8 | tRNA-Asn (NCBI) | compare |
| b3292 | zntR | -0.8 | -2.0 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b4519 | icdC | -0.8 | -2.6 | no description | compare |
| b2744 | surE | -0.8 | -4.2 | acid phosphatase (NCBI) | compare |
| b2450 | yffS | -0.8 | -1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1600 | mdtJ | -0.8 | -0.9 | multidrug efflux system transporter (NCBI) | compare |
| b1344 | ydaO | -0.8 | -2.6 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0764 | modB | -0.8 | -3.2 | molybdate ABC transporter permease protein (NCBI) | compare |
| b3545 | proK | -0.7 | -1.2 | tRNA-Pro (NCBI) | compare |
| b2991 | hybF | -0.7 | -3.0 | protein involved with the maturation of hydrogenases 1 and 2 (NCBI) | compare |
| b2037 | rfbX | -0.7 | -3.6 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b1951 | rcsA | -0.7 | -0.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3082 | ygjM | -0.7 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3563 | yiaB | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3479 | nikD | -0.7 | -4.1 | nickel transporter subunit (NCBI) | compare |
| b3388 | damX | -0.7 | -5.5 | hypothetical protein (NCBI) | compare |
| b1677 | lpp | -0.7 | -1.5 | murein lipoprotein (NCBI) | compare |
| b1658 | purR | -0.7 | -2.4 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1025 | ycdT | -0.7 | -0.8 | predicted diguanylate cyclase (NCBI) | compare |
| b0088 | murD | -0.7 | -1.4 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b4655 | ythA | -0.7 | -0.9 | expressed protein (RefSeq) | compare |
| b1861 | ruvA | -0.7 | -0.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2727 | hypB | -0.7 | -2.9 | GTP hydrolase involved in nickel liganding into hydrogenases (NCBI) | compare |
| b1955 | yedP | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b3742 | mioC | -0.7 | -2.7 | flavodoxin (NCBI) | compare |
| b3806 | cyaA | -0.7 | -2.7 | adenylate cyclase (NCBI) | compare |
| b2398 | yfeC | -0.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3446 | yrhB | -0.7 | -2.5 | hypothetical protein (NCBI) | compare |
| b0009 | mog | -0.7 | -3.8 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1221 | narL | -0.7 | -2.6 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | compare |
| b0970 | yccA | -0.7 | -2.3 | inner membrane protein (NCBI) | compare |
| b1527 | yneK | -0.7 | -1.1 | hypothetical protein (NCBI) | compare |
| b0739 | tolA | -0.7 | -1.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3094 | exuR | -0.7 | -2.9 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b0222 | lpcA | -0.7 | -1.5 | phosphoheptose isomerase (NCBI) | compare |
| b4390 | nadR | -0.6 | -3.7 | probable nadAB transcriptional regulator (VIMSS) | compare |
| b2877 | ygfJ | -0.6 | -3.6 | hypothetical protein (NCBI) | compare |
| b0556 | rzpD | -0.6 | -2.4 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b0535 | fimZ | -0.6 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0783 | moaC | -0.6 | -2.7 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b3619 | rfaD | -0.6 | -1.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3791 | rffA | -0.6 | -3.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1382 | ynbE | -0.6 | -1.1 | predicted lipoprotein (NCBI) | compare |
| b2165 | yeiN | -0.6 | -2.3 | hypothetical protein (NCBI) | compare |
| b0406 | tgt | -0.6 | -2.6 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0890 | ftsK | -0.6 | -1.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1503 | ydeR | -0.6 | -1.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1968 | yedV | -0.6 | -1.0 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b2314 | dedD | -0.6 | -1.8 | putative lipoprotein (VIMSS) | compare |
| b0436 | tig | -0.6 | -3.5 | trigger factor (NCBI) | compare |
| b3973 | birA | -0.6 | -1.3 | biotin--protein ligase (NCBI) | compare |
| b4509 | ylcG | -0.6 | -1.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2490 | b2490 | -0.6 | -1.7 | putative protein processing element (VIMSS) | compare |
| b4579 | yaiX | -0.6 | -2.3 | no description | compare |
| b0785 | moaE | -0.6 | -2.6 | molybdopterin synthase, large subunit (NCBI) | compare |
| b3786 | rffE | -0.6 | -4.6 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0888 | trxB | -0.6 | -1.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1083 | flgL | -0.6 | -2.2 | flagellar hook-associated protein L (NCBI) | compare |
| b4494 | arpB | -0.6 | -0.5 | no description | compare |
| b1097 | yceG | -0.6 | -2.7 | predicted aminodeoxychorismate lyase (NCBI) | conserved |
| b2571 | rseB | -0.6 | -3.0 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b2215 | ompC | -0.6 | -3.6 | outer membrane porin protein C (NCBI) | compare |
| b3129 | sohA | -0.6 | -1.4 | predicted regulator (NCBI) | compare |
| b1824 | yobF | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b3472 | b3472 | -0.6 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b2959 | yggL | -0.6 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1674 | ydhY | -0.6 | -2.9 | predicted 4Fe-4S ferridoxin-type protein (NCBI) | compare |
| b0437 | clpP | -0.6 | -2.5 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1863 | ruvC | -0.6 | -0.7 | Holliday junction resolvase (NCBI) | compare |
| b2471 | yffB | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b1579 | intQ | -0.6 | -1.0 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b0990 | cspG | -0.6 | -0.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2518 | ndk | -0.6 | -1.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b0438 | clpX | -0.6 | -2.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1860 | ruvB | -0.6 | -0.3 | Holliday junction DNA helicase B (NCBI) | compare |
| b0092 | ddlB | -0.6 | -2.4 | D-alanylalanine synthetase (NCBI) | compare |
| b0384 | psiF | -0.6 | -1.8 | induced by phosphate starvation (VIMSS) | compare |
| b1773 | ydjI | -0.6 | -0.6 | predicted aldolase (NCBI) | compare |
| b0826 | moeB | -0.6 | -2.4 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b2248 | yfaX | -0.6 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0767 | ybhE | -0.5 | -1.5 | 6-phosphogluconolactonase (NCBI) | compare |
| b2271 | yfbL | -0.5 | -2.2 | putative aminopeptidase (VIMSS) | compare |
| b0386 | proC | -0.5 | -2.1 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4538 | yoeF | -0.5 | -0.7 | hypothetical protein (RefSeq) | compare |
| b1363 | trkG | -0.5 | -0.3 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b0908 | aroA | -0.5 | -3.1 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1103 | ycfF | -0.5 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1877 | yecT | -0.5 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1290 | sapF | -0.5 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3628 | rfaB | -0.5 | -3.1 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b2279 | nuoK | -0.5 | -1.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1242 | ychE | -0.5 | -1.7 | predicted inner membrane protein (NCBI) | compare |
| b1778 | yeaA | -0.5 | -1.0 | methionine sulfoxide reductase B (NCBI) | compare |
| b2997 | hybO | -0.5 | -3.0 | hydrogenase 2, small subunit (NCBI) | compare |
| b3354 | yheU | -0.5 | -2.8 | hypothetical protein (NCBI) | compare |
| b3652 | recG | -0.5 | -3.1 | ATP-dependent DNA helicase (NCBI) | compare |
| b1295 | ymjA | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| b4577 | sgrS | -0.5 | -1.1 | small antisense RNA (NCBI) | compare |
| b3784 | rfe | -0.5 | -3.9 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1408 | b1408 | -0.5 | -1.5 | probable enzyme (VIMSS) | compare |
| b1253 | yciA | -0.5 | -1.5 | predicted hydrolase (NCBI) | compare |
| b4594 | ymgJ | -0.5 | -0.9 | hypothetical protein (RefSeq) | compare |
| b2424 | cysU | -0.5 | -0.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0530 | sfmA | -0.5 | -0.9 | putative fimbrial-like protein (VIMSS) | compare |
| b1648 | b1648 | -0.5 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1121 | ycfZ | -0.5 | -0.3 | predicted inner membrane protein (NCBI) | compare |