Experiment set9IT035 for Escherichia coli BW25113

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LB Anaerobic with Spectinomycin dihydrochloride pentahydrate 0.0000625 mM

Group: stress
Media: LB + Spectinomycin dihydrochloride pentahydrate (6.25E-02 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 5 genes in this experiment

For stress Spectinomycin dihydrochloride pentahydrate in Escherichia coli BW25113

For stress Spectinomycin dihydrochloride pentahydrate across organisms

SEED Subsystems

Subsystem #Specific
Deoxyribose and Deoxynucleoside Catabolism 2
Adenosyl nucleosidases 1
Purine conversions 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
purine ribonucleosides degradation 6 6 5
purine deoxyribonucleosides degradation I 4 4 3
purine deoxyribonucleosides degradation II 3 3 2
superpathway of purine deoxyribonucleosides degradation 7 7 4
adenine and adenosine salvage III 4 4 2
adenine and adenosine salvage I 2 2 1
xanthine and xanthosine salvage 2 2 1
guanine and guanosine salvage I 2 2 1
superpathway of pyrimidine deoxyribonucleosides degradation 6 6 2
2-deoxy-α-D-ribose 1-phosphate degradation 3 3 1
adenine and adenosine salvage V 3 3 1
pyrimidine deoxyribonucleosides degradation 3 3 1
superpathway of guanine and guanosine salvage 3 3 1
purine nucleotides degradation II (aerobic) 11 11 3
guanosine nucleotides degradation III 4 4 1
inosine 5'-phosphate degradation 4 4 1
adenosine nucleotides degradation II 5 5 1
nucleoside and nucleotide degradation (archaea) 10 4 2
nucleoside and nucleotide degradation (halobacteria) 6 3 1
fluoroacetate and fluorothreonine biosynthesis 6 1 1
superpathway of purine nucleotide salvage 14 13 2
ureide biosynthesis 7 5 1
salinosporamide A biosynthesis 15 3 1
arsenic detoxification (mammals) 17 8 1