| | gene | name | fitness | t score | description | |
|---|
| b1334 | fnr | -4.3 | -3.0 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b1765 | ydjA | -3.7 | -2.1 | predicted oxidoreductase (NCBI) | compare |
| b0463 | acrA | -3.7 | -12.4 | multidrug efflux system (NCBI) | compare |
| b0462 | acrB | -3.5 | -18.8 | multidrug efflux system protein (NCBI) | compare |
| b3035 | tolC | -3.1 | -9.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0683 | fur | -3.0 | -2.0 | ferric uptake regulator (NCBI) | compare |
| b0677 | nagA | -3.0 | -5.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0741 | pal | -2.9 | -3.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0053 | surA | -2.7 | -4.1 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0737 | tolQ | -2.6 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4025 | pgi | -2.5 | -9.1 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3199 | yrbK | -2.5 | -3.4 | hypothetical protein (NCBI) | compare |
| b2188 | yejM | -2.5 | -10.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b1855 | lpxM | -2.5 | -6.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3632 | rfaQ | -2.5 | -16.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3052 | rfaE | -2.3 | -5.4 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3977 | tyrU | -2.3 | -1.3 | tRNA-Tyr (NCBI) | compare |
| b4509 | ylcG | -2.3 | -3.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3163 | nlpI | -2.2 | -5.4 | hypothetical protein (NCBI) | compare |
| b4535 | yniD | -2.2 | -1.5 | predicted protein (RefSeq) | compare |
| b0437 | clpP | -2.1 | -6.0 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0178 | hlpA | -2.1 | -5.2 | periplasmic chaperone (NCBI) | compare |
| b0438 | clpX | -2.1 | -7.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3842 | rfaH | -2.1 | -5.5 | transcriptional activator RfaH (NCBI) | compare |
| b1429 | tehA | -2.0 | -2.2 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0222 | lpcA | -2.0 | -3.4 | phosphoheptose isomerase (NCBI) | compare |
| b3194 | yrbE | -2.0 | -10.3 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2346 | vacJ | -2.0 | -8.2 | predicted lipoprotein (NCBI) | compare |
| b3082 | ygjM | -2.0 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2512 | yfgL | -1.9 | -6.4 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3229 | sspA | -1.9 | -3.0 | stringent starvation protein A (NCBI) | compare |
| b3621 | rfaC | -1.9 | -3.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3631 | rfaG | -1.9 | -10.5 | glucosyltransferase I (NCBI) | compare |
| b1176 | minC | -1.8 | -3.0 | septum formation inhibitor (NCBI) | compare |
| b0014 | dnaK | -1.8 | -2.5 | molecular chaperone DnaK (NCBI) | compare |
| b3192 | yrbC | -1.8 | -9.6 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0688 | pgm | -1.8 | -3.4 | phosphoglucomutase (NCBI) | compare |
| b4237 | nrdG | -1.8 | -7.7 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -1.8 | -13.5 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b3195 | yrbF | -1.8 | -10.3 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0049 | apaH | -1.8 | -2.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b0740 | tolB | -1.7 | -3.5 | translocation protein TolB precursor (NCBI) | compare |
| b1236 | galU | -1.7 | -3.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3620 | rfaF | -1.7 | -4.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1882 | cheY | -1.7 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3784 | rfe | -1.7 | -11.4 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0739 | tolA | -1.6 | -2.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0730 | mngR | -1.6 | -1.1 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3465 | yhhF | -1.6 | -5.6 | predicted methyltransferase (NCBI) | compare |
| b3193 | yrbD | -1.6 | -7.8 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0902 | pflA | -1.6 | -7.0 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1482 | osmC | -1.6 | -2.1 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3627 | rfaI | -1.6 | -6.7 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4577 | sgrS | -1.6 | -2.6 | small antisense RNA (NCBI) | compare |
| b3630 | rfaP | -1.6 | -6.3 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2939 | yqgB | -1.5 | -1.7 | predicted protein (RefSeq) | compare |
| b2620 | smpB | -1.5 | -1.3 | SsrA-binding protein (NCBI) | compare |
| b3021 | ygiT | -1.5 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3191 | yrbB | -1.4 | -7.5 | orf, hypothetical protein (VIMSS) | compare |
| b3600 | mtlD | -1.4 | -8.9 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b2258 | b2258 | -1.4 | -1.8 | putative transport/receptor protein (VIMSS) | compare |
| b2085 | b2085 | -1.4 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b3619 | rfaD | -1.4 | -2.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2064 | asmA | -1.4 | -3.3 | predicted assembly protein (NCBI) | compare |
| b2498 | upp | -1.4 | -2.8 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1346 | ydaQ | -1.3 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -1.3 | -5.7 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3628 | rfaB | -1.3 | -6.1 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b1830 | prc | -1.3 | -4.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0763 | modA | -1.3 | -5.0 | molybdate transporter subunit (NCBI) | compare |
| b3930 | menA | -1.3 | -10.1 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2363 | yfdT | -1.3 | -1.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0783 | moaC | -1.3 | -5.1 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1677 | lpp | -1.3 | -1.7 | murein lipoprotein (NCBI) | compare |
| b1382 | ynbE | -1.3 | -1.9 | predicted lipoprotein (NCBI) | compare |
| b2174 | b2174 | -1.3 | -6.4 | orf, hypothetical protein (VIMSS) | compare |
| b4702 | mgtL | -1.3 | -1.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b4201 | priB | -1.3 | -2.6 | primosomal replication protein N (NCBI) | compare |
| b2579 | yfiD | -1.3 | -2.0 | pyruvate formate lyase subunit (NCBI) | compare |
| b4653 | yicT | -1.2 | -2.4 | no description | compare |
| b0903 | pflB | -1.2 | -8.2 | pyruvate formate lyase I (NCBI) | compare |
| b1589 | ynfG | -1.2 | -2.8 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b1831 | proQ | -1.2 | -3.5 | putative solute/DNA competence effector (NCBI) | compare |
| b0738 | tolR | -1.1 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3838 | tatB | -1.1 | -5.9 | sec-independent translocase (NCBI) | compare |
| b1607 | ydgC | -1.1 | -1.5 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b0218 | yafU | -1.1 | -1.8 | predicted inner membrane protein (RefSeq) | compare |
| b0819 | ybiS | -1.1 | -6.4 | hypothetical protein (NCBI) | compare |
| b0548 | ninE | -1.1 | -2.3 | DLP12 prophage; conserved protein (NCBI) | compare |
| b0080 | fruR | -1.1 | -4.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4594 | ymgJ | -1.1 | -1.7 | hypothetical protein (RefSeq) | compare |
| b3609 | secB | -1.1 | -3.5 | export protein SecB (NCBI) | compare |
| b0471 | ybaB | -1.1 | -2.9 | hypothetical protein (NCBI) | compare |
| b3649 | rpoZ | -1.1 | -2.4 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b1217 | chaB | -1.1 | -1.4 | cation transport regulator (NCBI) | compare |
| b1613 | manA | -1.1 | -1.6 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b1290 | sapF | -1.0 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2532 | yfhQ | -1.0 | -3.3 | predicted methyltransferase (NCBI) | compare |
| b0145 | dksA | -1.0 | -2.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2814 | metZ | -1.0 | -1.4 | tRNA-Met (NCBI) | compare |
| b0877 | ybjX | -1.0 | -5.0 | hypothetical protein (NCBI) | conserved |
| b1291 | sapD | -1.0 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4418 | sraB | -1.0 | -1.9 | unknown RNA (NCBI) | compare |
| b2808 | gcvA | -1.0 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2937 | speB | -1.0 | -4.6 | agmatinase (NCBI) | compare |
| b3863 | polA | -1.0 | -0.6 | DNA polymerase I (NCBI) | compare |
| b1506 | yneL | -1.0 | -0.9 | predicted transcriptional regulator (NCBI) | compare |
| b0764 | modB | -1.0 | -4.0 | molybdate ABC transporter permease protein (NCBI) | compare |
| b0781 | moaA | -1.0 | -4.8 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b1125 | potB | -0.9 | -3.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0785 | moaE | -0.9 | -3.3 | molybdopterin synthase, large subunit (NCBI) | compare |
| b4179 | vacB | -0.9 | -3.4 | putative enzyme (VIMSS) | compare |
| b2571 | rseB | -0.9 | -4.8 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b1454 | yncG | -0.9 | -1.7 | predicted enzyme (NCBI) | compare |
| b3387 | dam | -0.9 | -5.9 | DNA adenine methylase (NCBI) | compare |
| b2479 | gcvR | -0.9 | -3.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2707 | srlR | -0.9 | -4.2 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b0934 | ycbM | -0.9 | -1.8 | putative transport system permease protein (VIMSS) | compare |
| b1103 | ycfF | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0232 | yafN | -0.9 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3197 | kdsD | -0.9 | -5.8 | D-arabinose 5-phosphate isomerase (NCBI) | compare |
| b0765 | modC | -0.9 | -3.9 | molybdate transporter subunit (NCBI) | compare |
| b0957 | ompA | -0.9 | -2.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0239 | frsA | -0.9 | -5.4 | fermentation/respiration switch protein (NCBI) | compare |
| b0247 | ykfG | -0.9 | -1.2 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b4184 | yjfL | -0.9 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b3728 | pstS | -0.9 | -1.4 | phosphate transporter subunit (NCBI) | compare |
| b3858 | yihD | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| b3349 | slyD | -0.9 | -3.9 | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) (NCBI) | compare |
| b1730 | ydjO | -0.9 | -0.5 | predicted protein (RefSeq) | compare |
| b0759 | galE | -0.9 | -4.2 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b1025 | ycdT | -0.9 | -0.8 | predicted diguanylate cyclase (NCBI) | compare |
| b0547 | ybcN | -0.9 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3794 | rffM | -0.9 | -4.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1524 | yneH | -0.9 | -0.9 | predicted glutaminase (NCBI) | compare |
| b4570 | lomR | -0.8 | -1.5 | no description | compare |
| b1413 | hrpA | -0.8 | -5.2 | ATP-dependent helicase (RefSeq) | conserved |
| b2528 | iscA | -0.8 | -1.1 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3836 | b3836 | -0.8 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b2617 | smpA | -0.8 | -2.1 | small membrane protein A (VIMSS) | compare |
| b1620 | malI | -0.8 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3786 | rffE | -0.8 | -5.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3857 | mobA | -0.8 | -3.4 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b0827 | moeA | -0.8 | -3.3 | molybdopterin biosynthesis protein (NCBI) | compare |
| b4383 | deoB | -0.8 | -4.8 | phosphopentomutase (NCBI) | compare |
| b1819 | manZ | -0.8 | -2.8 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b1643 | ydhI | -0.8 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b1503 | ydeR | -0.8 | -1.8 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0226 | dinJ | -0.8 | -2.9 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1259 | yciG | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3479 | nikD | -0.8 | -4.8 | nickel transporter subunit (NCBI) | compare |
| b2572 | rseA | -0.8 | -2.2 | anti-sigma factor (NCBI) | compare |
| b3405 | ompR | -0.8 | -2.7 | osmolarity response regulator (NCBI) | compare |
| b4042 | dgkA | -0.8 | -1.4 | diacylglycerol kinase (NCBI) | compare |
| b2993 | hybD | -0.8 | -2.2 | predicted maturation element for hydrogenase 2 (NCBI) | compare |
| b3157 | yhbT | -0.8 | -2.5 | predicted lipid carrier protein (NCBI) | compare |
| b1951 | rcsA | -0.8 | -0.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b0627 | tatE | -0.8 | -1.5 | twin arginine translocase protein E (NCBI) | compare |
| b3478 | nikC | -0.8 | -4.6 | nickel transporter subunit (NCBI) | compare |
| b1241 | adhE | -0.8 | -4.9 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b0009 | mog | -0.8 | -3.9 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b0436 | tig | -0.8 | -4.2 | trigger factor (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.0 | cold shock protein E (NCBI) | compare |
| b4695 | ykgT | -0.7 | -1.4 | no description | compare |
| b1150 | ymfR | -0.7 | -0.9 | e14 prophage; predicted protein (NCBI) | compare |
| b1591 | b1591 | -0.7 | -1.4 | putative oxidoreductase component (VIMSS) | compare |
| b1438 | ydcQ | -0.7 | -1.6 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1231 | tyrT | -0.7 | -0.6 | tRNA-Tyr (NCBI) | compare |
| b1579 | intQ | -0.7 | -1.0 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b2807 | ygdD | -0.7 | -2.6 | conserved inner membrane protein (NCBI) | compare |
| b3675 | yidG | -0.7 | -3.5 | predicted inner membrane protein (NCBI) | compare |
| b0122 | yacC | -0.7 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1456 | rhsE | -0.7 | -3.2 | rhsE element core protein RshE (RefSeq) | compare |
| b1671 | ydhX | -0.7 | -1.4 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2215 | ompC | -0.7 | -4.1 | outer membrane porin protein C (NCBI) | compare |
| b3644 | yicC | -0.7 | -3.4 | hypothetical protein (NCBI) | compare |
| b3414 | gntY | -0.7 | -2.8 | predicted gluconate transport associated protein (NCBI) | compare |
| b2997 | hybO | -0.7 | -4.3 | hydrogenase 2, small subunit (NCBI) | compare |
| b1686 | ydiI | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -0.7 | -5.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4515 | ybgT | -0.7 | -1.2 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | -0.7 | -0.7 | Holliday junction resolvase (NCBI) | compare |
| b2996 | hybA | -0.7 | -3.8 | hydrogenase 2 4Fe-4S ferredoxin-type component (NCBI) | compare |
| b2274 | yfbO | -0.7 | -2.1 | predicted protein (RefSeq) | compare |
| b1707 | ydiV | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0605 | ahpC | -0.7 | -1.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b4529 | ydbJ | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b1782 | mipA | -0.7 | -2.3 | scaffolding protein for murein synthesizing machinery (NCBI) | compare |
| b1520 | b1520 | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0890 | ftsK | -0.7 | -1.3 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0506 | allR | -0.7 | -3.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2248 | yfaX | -0.7 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1531 | marA | -0.7 | -1.5 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b3068 | ygjF | -0.7 | -2.1 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b2317 | dedA | -0.7 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b0556 | rzpD | -0.7 | -2.1 | DLP12 prophage; predicted murein endopeptidase (NCBI) | compare |
| b4477 | dgoA | -0.7 | -3.0 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) | compare |
| b3476 | nikA | -0.7 | -4.4 | nickel transporter subunit (NCBI) | compare |
| b2168 | fruK | -0.6 | -0.6 | 1-phosphofructokinase (NCBI) | compare |
| b2243 | glpC | -0.6 | -3.4 | sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI) | compare |