Experiment set9IT021 for Escherichia coli BW25113

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LB Anaerobic with Furaltadone hydrochloride 0.000015625 mM

Group: stress
Media: LB + Furaltadone hydrochloride (1.56E-02 mM)
Culturing: Keio_ML9a, 96 deep-well microplate; Multitron, Anaerobic, at 37 (C), shaken=0 rpm
By: Hans_Hualan on 7/20/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 24 genes in this experiment

For stress Furaltadone hydrochloride in Escherichia coli BW25113

For stress Furaltadone hydrochloride across organisms

SEED Subsystems

Subsystem #Specific
DNA repair, UvrABC system 3
DNA repair, bacterial RecFOR pathway 3
Iron acquisition in Vibrio 2
Transport of Iron 2
Campylobacter Iron Metabolism 1
Cobalt-zinc-cadmium resistance 1
D-allose utilization 1
DNA-replication 1
Fermentations: Mixed acid 1
Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1
Glycine Biosynthesis 1
Glycine and Serine Utilization 1
Pterin biosynthesis 1
Purine conversions 1
Trehalose Uptake and Utilization 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
acetaldehyde biosynthesis I 1 1 1
guanine and guanosine salvage III 1 1 1
L-threonine degradation II 2 2 1
glutathione degradation (DUG pathway) 2 2 1
tetrahydropteridine recycling 2 2 1
ethanol degradation I 2 2 1
pyruvate fermentation to ethanol II 2 1 1
superpathway of guanine and guanosine salvage 3 3 1
ethanol degradation II 3 3 1
adenine and adenosine salvage V 3 3 1
pyruvate fermentation to ethanol III 3 3 1
pyruvate fermentation to ethanol I 3 3 1
L-leucine degradation III 3 2 1
L-valine degradation II 3 2 1
L-isoleucine degradation II 3 2 1
acrylate degradation II 3 2 1
L-phenylalanine degradation V 3 1 1
L-methionine degradation III 3 1 1
phytol degradation 4 3 1
salidroside biosynthesis 4 2 1
L-tyrosine degradation III 4 2 1
L-phenylalanine degradation III 4 2 1
cytidine-5'-diphosphate-glycerol biosynthesis 4 1 1
ethanolamine utilization 5 5 1
CMP-3-deoxy-D-manno-octulosonate biosynthesis 5 5 1
pyruvate fermentation to isobutanol (engineered) 5 4 1
acetylene degradation (anaerobic) 5 4 1
(S)-propane-1,2-diol degradation 5 3 1
phenylethanol biosynthesis 5 2 1
γ-glutamyl cycle 6 5 1
noradrenaline and adrenaline degradation 13 4 2
3-methylbutanol biosynthesis (engineered) 7 6 1
CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis 7 4 1
serotonin degradation 7 3 1
butanol and isobutanol biosynthesis (engineered) 8 2 1
superpathway of fermentation (Chlamydomonas reinhardtii) 9 8 1
superpathway of Clostridium acetobutylicum solventogenic fermentation 13 7 1
3-hydroxypropanoate cycle 13 7 1
glyoxylate assimilation 13 5 1
L-tryptophan degradation V (side chain pathway) 13 1 1
mixed acid fermentation 16 16 1
superpathway of (Kdo)2-lipid A biosynthesis 17 17 1
superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation 17 9 1
heterolactic fermentation 18 16 1
superpathway of L-threonine metabolism 18 16 1
3-hydroxypropanoate/4-hydroxybutanate cycle 18 10 1
superpathway of the 3-hydroxypropanoate cycle 18 7 1
hexitol fermentation to lactate, formate, ethanol and acetate 19 19 1
superpathway of anaerobic sucrose degradation 19 17 1
superpathway of N-acetylneuraminate degradation 22 22 1
superpathway of Kdo2-lipid A biosynthesis 25 24 1