Experiment set9IT003 for Escherichia coli BW25113

Compare to:

LB Anaerobic with Nitrofurantoin 0.00003125 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b4058 uvrA -5.3 -13.3 excinuclease ABC subunit A (NCBI) conserved
b1913 uvrC -4.5 -5.4 excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) conserved
b0779 uvrB -3.9 -8.7 excinuclease ABC subunit B (NCBI) conserved
b3700 recF -3.7 -9.9 recombination protein F (NCBI) conserved
b0472 recR -3.5 -8.0 recombination protein RecR (NCBI) conserved
b3813 uvrD -2.8 -13.7 DNA-dependent ATPase I and helicase II (NCBI) compare
b3617 kbl -2.5 -6.6 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) compare
b2214 yojL -2.0 -5.1 predicted thiamine biosynthesis lipoprotein (NCBI) compare
b3409 feoB -1.8 -10.5 ferrous iron transport protein B (NCBI) compare
b2892 recJ -1.6 -6.6 ssDNA exonuclease, 5' --> 3'-specific (NCBI) compare
b4138 dcuA -1.4 -5.4 C4-dicarboxylate antiporter (NCBI) compare
b1413 hrpA -1.3 -5.5 ATP-dependent helicase (RefSeq) compare
b1905 ftn -1.2 -5.3 ferritin iron storage protein (cytoplasmic) (NCBI) compare
b2616 recN -1.2 -5.8 recombination and repair protein (NCBI) conserved
b3745 yieM +1.0 6.5 predicted von Willibrand factor containing protein (NCBI) compare
b3346 yheO +1.3 5.1 orf, hypothetical protein (VIMSS) compare
b1639 ydhA +1.7 6.3 orf, hypothetical protein (VIMSS) compare
b0125 hpt +2.2 6.4 hypoxanthine phosphoribosyltransferase (VIMSS) compare
b0578 nfnB +2.5 7.5 dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive (NCBI) compare
b0851 nfsA +2.6 6.7 nitroreductase A, NADPH-dependent, FMN-dependent (NCBI) compare


Specific phenotypes for stress Nitrofurantoin across organisms