Experiment set8S396 for Ralstonia solanacearum PSI07

Compare to:

SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin

200 most important genes:

  gene name fitness t score description  
RPSI07_RS05490 -6.7 -14.3 glycosyltransferase family 39 protein compare
RPSI07_RS10335 -4.7 -2.4 ABC transporter ATP-binding protein compare
RPSI07_RS13625 -4.6 -6.3 glycosyltransferase family 2 protein compare
RPSI07_RS10360 -4.4 -1.8 STAS domain-containing protein compare
RPSI07_RS10350 -4.1 -6.8 ABC transporter compare
RPSI07_RS19655 -3.8 -3.6 ADP-glyceromanno-heptose 6-epimerase compare
RPSI07_RS21660 -3.7 -3.0 Glu/Leu/Phe/Val dehydrogenase compare
RPSI07_RS22630 -3.5 -2.9 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
RPSI07_RS09830 -3.5 -2.4 N-acylglucosamine 2-epimerase compare
RPSI07_RS23905 -3.4 -13.0 hydrophobe/amphiphile efflux-1 family RND transporter compare
RPSI07_RS20605 -3.2 -2.2 glucose-1-phosphate thymidylyltransferase compare
RPSI07_RS12090 -3.2 -6.3 membrane protein compare
RPSI07_RS10345 -3.2 -1.9 outer membrane lipid asymmetry maintenance protein MlaD compare
RPSI07_RS19660 -3.1 -2.0 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
RPSI07_RS10340 -3.1 -3.0 ABC transporter permease compare
RPSI07_RS07310 -2.8 -3.1 6-phosphogluconolactonase compare
RPSI07_RS13515 -2.8 -3.2 exodeoxyribonuclease VII small subunit compare
RPSI07_RS11440 -2.7 -5.0 LysR family transcriptional regulator compare
RPSI07_RS23910 -2.7 -9.4 multidrug transporter compare
RPSI07_RS15280 -2.7 -10.8 ATP-dependent zinc metalloprotease FtsH compare
RPSI07_RS23900 -2.7 -10.3 efflux RND transporter periplasmic adaptor subunit compare
RPSI07_RS23595 -2.6 -6.8 glycosyltransferase family 39 protein compare
RPSI07_RS19245 -2.6 -3.8 aspartate/tyrosine/aromatic aminotransferase compare
RPSI07_RS12575 -2.5 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
RPSI07_RS22410 -2.5 -1.7 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
RPSI07_RS16125 -2.4 -1.5 ATP-dependent Clp protease proteolytic subunit compare
RPSI07_RS21260 -2.4 -1.6 recombinase RecA compare
RPSI07_RS04460 -2.4 -8.6 acetyltransferase compare
RPSI07_RS02005 -2.3 -1.9 DNA-binding response regulator compare
RPSI07_RS13510 -2.3 -7.5 aromatic ring-hydroxylating dioxygenase subunit alpha compare
RPSI07_RS04455 -2.3 -5.6 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
RPSI07_RS12785 -2.2 -1.5 phosphoadenylyl-sulfate reductase compare
RPSI07_RS14245 -2.2 -5.0 DUF3619 domain-containing protein compare
RPSI07_RS13630 -2.1 -4.9 glycosyl transferase compare
RPSI07_RS12235 -2.1 -2.6 exodeoxyribonuclease VII large subunit compare
RPSI07_RS20590 -2.1 -5.0 glycosyltransferase family 2 protein compare
RPSI07_RS17280 -2.0 -3.0 lysophospholipid transporter LplT compare
RPSI07_RS15985 -2.0 -4.6 class I poly(R)-hydroxyalkanoic acid synthase compare
RPSI07_RS14735 -2.0 -4.2 site-specific DNA-methyltransferase compare
RPSI07_RS04500 -2.0 -6.0 multidrug MFS transporter compare
RPSI07_RS00180 -2.0 -1.3 chemotaxis protein CheY compare
RPSI07_RS16830 -1.9 -4.4 MgtC/SapB family protein compare
RPSI07_RS16030 -1.9 -3.8 phosphoserine phosphatase SerB compare
RPSI07_RS23315 -1.9 -3.0 lauroyl acyltransferase compare
RPSI07_RS20285 -1.9 -2.2 7-cyano-7-deazaguanine synthase QueC compare
RPSI07_RS24005 -1.8 -5.3 hypothetical protein compare
RPSI07_RS22755 -1.8 -3.7 thiol:disulfide interchange protein DsbA/DsbL compare
RPSI07_RS15180 -1.8 -1.5 hypothetical protein compare
RPSI07_RS13190 -1.8 -2.3 DNA translocase FtsK compare
RPSI07_RS22380 -1.7 -1.0 amidophosphoribosyltransferase compare
RPSI07_RS04485 -1.7 -2.9 acyltransferase compare
RPSI07_RS14720 -1.7 -1.6 tRNA pseudouridine(38-40) synthase TruA compare
RPSI07_RS11130 -1.7 -3.7 hypoxanthine-guanine phosphoribosyltransferase compare
RPSI07_RS14615 -1.7 -2.5 DUF2863 domain-containing protein compare
RPSI07_RS10675 -1.7 -1.1 hypothetical protein compare
RPSI07_RS10355 -1.7 -0.8 hypothetical protein compare
RPSI07_RS03430 -1.7 -4.4 TetR family transcriptional regulator compare
RPSI07_RS14240 -1.7 -5.5 DUF3106 domain-containing protein compare
RPSI07_RS23565 -1.6 -2.4 PAS domain-containing sensor histidine kinase compare
RPSI07_RS07320 -1.6 -3.6 phosphogluconate dehydratase compare
RPSI07_RS01335 -1.6 -2.1 organic hydroperoxide resistance protein compare
RPSI07_RS25000 -1.6 -3.6 hypothetical protein compare
RPSI07_RS13670 -1.6 -0.6 nicotinate-nucleotide adenylyltransferase compare
RPSI07_RS07330 -1.6 -1.6 DUF3293 domain-containing protein compare
RPSI07_RS21080 -1.5 -3.5 DUF1045 domain-containing protein compare
RPSI07_RS16885 -1.5 -1.8 6-carboxytetrahydropterin synthase QueD compare
RPSI07_RS15970 -1.5 -1.4 RluA family pseudouridine synthase compare
RPSI07_RS18210 -1.5 -1.9 antibiotic biosynthesis monooxygenase compare
RPSI07_RS18380 -1.5 -3.5 hypothetical protein compare
RPSI07_RS08600 -1.5 -6.6 ATP-dependent DNA helicase Rep compare
RPSI07_RS22715 -1.5 -1.3 hypothetical protein compare
RPSI07_RS05680 -1.5 -2.9 LysR family transcriptional regulator compare
RPSI07_RS22890 -1.5 -1.7 DUF1289 domain-containing protein compare
RPSI07_RS09885 -1.5 -7.7 glycerol-3-phosphate dehydrogenase compare
RPSI07_RS18065 -1.5 -6.0 FtsH protease activity modulator HflK compare
RPSI07_RS23360 -1.5 -1.7 carboxymuconolactone decarboxylase family protein compare
RPSI07_RS13615 -1.4 -2.6 O-antigen ligase family protein compare
RPSI07_RS11360 -1.4 -1.5 DUF937 domain-containing protein compare
RPSI07_RS18890 -1.4 -3.7 GlsB/YeaQ/YmgE family stress response membrane protein compare
RPSI07_RS01465 -1.4 -3.7 flagellar biosynthetic protein FliO compare
RPSI07_RS21665 -1.4 -5.4 LysR family transcriptional regulator compare
RPSI07_RS08570 -1.4 -4.5 L-serine ammonia-lyase compare
RPSI07_RS19730 -1.4 -1.3 membrane protein compare
RPSI07_RS23065 -1.4 -1.0 acylphosphatase compare
RPSI07_RS18645 -1.4 -2.3 MarR family transcriptional regulator compare
RPSI07_RS23505 -1.4 -1.6 5-formyltetrahydrofolate cyclo-ligase compare
RPSI07_RS18710 -1.4 -3.5 hypothetical protein compare
RPSI07_RS15235 -1.4 -8.5 lytic transglycosylase compare
RPSI07_RS23495 -1.3 -3.2 methylenetetrahydrofolate reductase [NAD(P)H] compare
RPSI07_RS12680 -1.3 -1.8 peptidylprolyl isomerase compare
RPSI07_RS12085 -1.3 -4.5 TetR/AcrR family transcriptional regulator compare
RPSI07_RS23205 -1.3 -3.4 M48 family peptidase compare
RPSI07_RS08170 -1.3 -1.6 5'-methylthioadenosine/adenosylhomocysteine nucleosidase compare
RPSI07_RS20405 -1.3 -2.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
RPSI07_RS19205 -1.3 -0.8 Fe-S cluster assembly transcriptional regulator IscR compare
RPSI07_RS18990 -1.3 -3.7 elongation factor 4 compare
RPSI07_RS07645 -1.3 -2.4 sugar ABC transporter permease compare
RPSI07_RS17015 -1.3 -3.8 phosphoenolpyruvate synthase compare
RPSI07_RS13500 -1.3 -1.8 sulfurtransferase compare
RPSI07_RS12160 -1.3 -2.7 site-specific tyrosine recombinase XerD compare
RPSI07_RS16405 -1.3 -2.2 4-hydroxybutyrate dehydrogenase compare
RPSI07_RS03290 -1.3 -1.8 translesion DNA synthesis-associated protein ImuA compare
RPSI07_RS11445 -1.3 -1.8 ferric iron uptake transcriptional regulator compare
RPSI07_RS11030 -1.2 -1.2 NUDIX domain-containing protein compare
RPSI07_RS23690 -1.2 -3.0 tyrosine recombinase XerC compare
RPSI07_RS07670 -1.2 -3.0 KR domain-containing protein compare
RPSI07_RS08875 -1.1 -1.3 hypothetical protein compare
RPSI07_RS21180 -1.1 -1.5 zinc-finger domain-containing protein compare
RPSI07_RS16175 -1.1 -1.1 glucose-6-phosphate isomerase compare
RPSI07_RS19230 -1.1 -2.6 ribokinase compare
RPSI07_RS11265 -1.1 -1.8 TlpA family protein disulfide reductase compare
RPSI07_RS12055 -1.1 -2.2 cysteine methyltransferase compare
RPSI07_RS15225 -1.1 -2.1 SAM-dependent methyltransferase compare
RPSI07_RS21455 -1.1 -1.4 EamA/RhaT family transporter compare
RPSI07_RS17500 -1.1 -0.7 hypothetical protein compare
RPSI07_RS21495 -1.1 -3.8 nucleotidyltransferase family protein compare
RPSI07_RS08725 -1.1 -1.4 septal ring lytic transglycosylase RlpA family protein compare
RPSI07_RS16070 -1.1 -2.1 two-component system response regulator OmpR compare
RPSI07_RS22405 -1.1 -2.6 rhodanese-like domain-containing protein compare
RPSI07_RS11415 -1.1 -2.2 short-chain dehydrogenase compare
RPSI07_RS00975 -1.0 -7.3 sensor domain-containing diguanylate cyclase compare
RPSI07_RS11040 -1.0 -2.6 cell division protein ZapD compare
RPSI07_RS05530 -1.0 -2.4 acyloxyacyl hydrolase compare
RPSI07_RS24105 -1.0 -2.6 hypothetical protein compare
RPSI07_RS09270 -1.0 -2.1 hypothetical protein compare
RPSI07_RS02280 -1.0 -2.4 amino acid ABC transporter compare
RPSI07_RS18475 -1.0 -2.1 class I SAM-dependent methyltransferase compare
RPSI07_RS18575 -1.0 -1.7 hypothetical protein compare
RPSI07_RS04475 -1.0 -4.8 heparinase ii/iii-like domain compare
RPSI07_RS19005 -1.0 -1.6 sugar dehydratase compare
RPSI07_RS22080 -1.0 -1.8 LysE family translocator compare
RPSI07_RS23425 -1.0 -1.5 FAD-dependent oxidoreductase compare
RPSI07_RS04095 -1.0 -1.3 DUF2946 domain-containing protein compare
RPSI07_RS23750 -1.0 -2.5 DNA-binding response regulator compare
RPSI07_RS05725 -1.0 -4.5 cytochrome d ubiquinol oxidase subunit II compare
RPSI07_RS21720 -1.0 -2.3 dihydroneopterin triphosphate diphosphatase compare
RPSI07_RS01895 -1.0 -6.0 CusA/CzcA family heavy metal efflux RND transporter compare
RPSI07_RS18470 -1.0 -1.2 4-hydroxy-tetrahydrodipicolinate synthase compare
RPSI07_RS14075 -1.0 -2.2 purine permease compare
RPSI07_RS04480 -1.0 -3.7 dehydrogenase compare
RPSI07_RS08595 -1.0 -0.7 hypothetical protein compare
RPSI07_RS16095 -1.0 -1.7 efflux RND transporter periplasmic adaptor subunit compare
RPSI07_RS04490 -1.0 -3.2 transferase compare
RPSI07_RS22185 -1.0 -0.6 outer membrane lipoprotein LolB compare
RPSI07_RS20730 -1.0 -1.2 Flp family type IVb pilin compare
RPSI07_RS13140 -1.0 -2.0 aldehyde dehydrogenase compare
RPSI07_RS11615 -1.0 -1.4 tRNA guanosine(34) transglycosylase Tgt compare
RPSI07_RS10605 -1.0 -1.8 glucans biosynthesis glucosyltransferase MdoH compare
RPSI07_RS21325 -1.0 -3.0 RNA helicase compare
RPSI07_RS21685 -1.0 -1.4 acetyl-CoA C-acyltransferase compare
RPSI07_RS10570 -1.0 -1.7 cytochrome o ubiquinol oxidase subunit I compare
RPSI07_RS03095 -1.0 -1.9 hypothetical protein compare
RPSI07_RS20165 -1.0 -1.3 flavin reductase compare
RPSI07_RS04385 -1.0 -1.6 hypothetical protein compare
RPSI07_RS17555 -1.0 -3.4 peptidase P60 compare
RPSI07_RS17270 -1.0 -2.5 DNA repair protein RadA compare
RPSI07_RS16090 -0.9 -2.6 squalene synthase HpnD compare
RPSI07_RS08760 -0.9 -2.4 cytochrome C transmembrane protein compare
RPSI07_RS10535 -0.9 -2.8 sensor histidine kinase compare
RPSI07_RS11920 -0.9 -2.5 formimidoylglutamase compare
RPSI07_RS05330 -0.9 -3.0 DUF1272 domain-containing protein compare
RPSI07_RS11240 -0.9 -1.1 DUF3426 domain-containing protein compare
RPSI07_RS10500 -0.9 -4.7 large conductance mechanosensitive channel protein MscL compare
RPSI07_RS06660 -0.9 -0.9 potassium transporter Kef compare
RPSI07_RS14160 -0.9 -2.4 xanthine dehydrogenase accessory protein XdhC compare
RPSI07_RS13400 -0.9 -0.6 ABC transporter ATP-binding protein compare
RPSI07_RS21765 -0.9 -3.4 membrane protein compare
RPSI07_RS19540 -0.9 -4.9 threonine-phosphate decarboxylase compare
RPSI07_RS04465 -0.9 -2.0 sugar transferase compare
RPSI07_RS10245 -0.9 -2.2 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
RPSI07_RS11620 -0.9 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
RPSI07_RS10330 -0.9 -1.9 tripartite tricarboxylate transporter substrate binding protein compare
RPSI07_RS18450 -0.9 -1.0 peptidylprolyl isomerase compare
RPSI07_RS23190 -0.9 -2.8 short chain dehydrogenase compare
RPSI07_RS13405 -0.9 -1.5 ABC transporter ATP-binding protein compare
RPSI07_RS13110 -0.9 -3.9 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
RPSI07_RS17430 -0.9 -2.2 alkanesulfonate monooxygenase, FMNH(2)-dependent compare
RPSI07_RS17215 -0.9 -0.6 D-aminopeptidase compare
RPSI07_RS21190 -0.9 -1.7 hypothetical protein compare
RPSI07_RS14260 -0.9 -0.8 acetolactate synthase small subunit compare
RPSI07_RS21850 -0.9 -2.5 gluconate kinase compare
RPSI07_RS21815 -0.9 -1.1 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
RPSI07_RS15905 -0.9 -1.4 leucyl/phenylalanyl-tRNA--protein transferase compare
RPSI07_RS19925 -0.9 -2.2 universal stress protein compare
RPSI07_RS05720 -0.9 -5.0 cytochrome ubiquinol oxidase subunit I compare
RPSI07_RS15185 -0.9 -2.2 conjugal transfer protein TraR compare
RPSI07_RS13980 -0.9 -2.5 hypothetical protein compare
RPSI07_RS15730 -0.9 -2.2 MerR family transcriptional regulator compare
RPSI07_RS23100 -0.8 -1.8 formylglycine-generating enzyme family protein compare
RPSI07_RS21385 -0.8 -1.3 PhoH family protein compare
RPSI07_RS20335 -0.8 -1.4 transcriptional regulator NrdR compare
RPSI07_RS16155 -0.8 -2.5 peptidylprolyl isomerase compare
RPSI07_RS06505 -0.8 -1.7 hypothetical protein compare
RPSI07_RS24340 -0.8 -1.6 hypothetical protein compare
RPSI07_RS23670 -0.8 -2.7 hypothetical protein compare
RPSI07_RS13175 -0.8 -2.4 trimeric intracellular cation channel family protein compare
RPSI07_RS11955 -0.8 -0.6 nucleoside diphosphate kinase regulator compare
RPSI07_RS23755 -0.8 -4.0 sensor histidine kinase compare
RPSI07_RS25290 -0.8 -1.1 hypothetical protein compare
RPSI07_RS00305 -0.8 -1.1 LysR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Ralstonia solanacearum PSI07 in stress experiments

For stress Ralstonia_antibiotic_mix_minus_Bacitracin across organisms