Experiment set8S230 for Escherichia coli BL21

Compare to:

Ste04

200 most detrimental genes:

  gene name fitness t score description  
ECD_01565 +1.6 2.3 putative arabinose efflux transporter compare
ECD_01681 +1.2 2.1 integration host factor (IHF), DNA-binding protein, alpha subunit compare
ECD_01667 +1.0 2.4 putative electron transfer flavoprotein, FAD-binding subunit compare
ECD_01763 +1.0 0.9 diguanylate cyclase compare
ECD_03358 +1.0 1.7 stress response protein acid-resistance protein compare
ECD_01188 +1.0 2.5 SIRB family inner membrane protein compare
ECD_01404 +1.0 2.7 DUF606 family inner membrane protein compare
ECD_04123 +0.9 2.4 DUF898 family inner membrane protein compare
ECD_02080 +0.9 2.9 galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor compare
ECD_00807 +0.9 1.2 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx compare
ECD_00380 +0.8 1.3 cytochrome o ubiquinol oxidase subunit IV compare
ECD_00865 +0.8 2.9 arginine ABC transporter periplasmic binding protein compare
ECD_01118 +0.8 2.3 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_00393 +0.8 2.1 periplasmic folding chaperone, has an inactive PPIase domain compare
ECD_03774 +0.8 2.3 CopG family putative transcriptional regulator compare
ECD_00322 +0.8 1.5 putative transcriptional regulator compare
ECD_02710 +0.8 1.9 CTP:molybdopterin cytidylyltransferase compare
ECD_01045 +0.7 1.8 OPG biosynthetic periplasmic beta-1,6 branching glycosyltransferase compare
ECD_00554 +0.7 2.2 regulator of length of O-antigen component of lipopolysaccharide chains compare
ECD_03453 +0.7 0.9 DUF3302 family inner membrane protein compare
ECD_02431 +0.7 2.5 3-phenylpropionate dioxygenase, small (beta) subunit compare
ECD_00880 +0.7 1.4 aquaporin Z compare
ECD_00487 +0.7 1.4 Excisionase compare
ECD_02122 +0.7 1.7 periplasmic thioredoxin of cytochrome c-type biogenesis compare
ECD_02694 +0.7 1.1 putative LuxR family transcriptional regulator compare
ECD_10005 +0.7 1.4 Excisionase compare
ECD_02769 +0.7 2.2 uncharacterized protein compare
ECD_00441 +0.7 2.1 iron export ABC transporter ATPase; peroxide resistance protein compare
ECD_01634 +0.7 1.9 multidrug efflux system transporter compare
ECD_03056 +0.7 3.1 ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component compare
ECD_01561 +0.7 1.4 H(+)/Cl(-) exchange transporter compare
ECD_02162 +0.7 1.1 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance compare
ECD_02254 +0.7 1.5 chorismate synthase compare
ECD_00802 +0.7 1.5 ribosomal protein S12 methylthiotransferase compare
ECD_01322 +0.7 1.7 Rac prophage; integrase compare
ECD_01198 +0.7 1.8 putative invasin compare
ECD_03425 +0.7 0.8 putative hydrogenase, 4Fe-4S ferredoxin-type component compare
ECD_02058 +0.7 1.4 putative ABC transporter permease compare
ECD_01735 +0.7 2.0 protease IV (signal peptide peptidase) compare
ECD_01040 +0.7 1.9 curli assembly protein compare
ECD_00967 +0.6 1.6 methylglyoxal synthase compare
ECD_01774 +0.6 1.3 ribonuclease D compare
ECD_00209 +0.6 1.4 lipoprotein compare
ECD_01584 +0.6 2.0 putative outer membrane porin for beta-glucuronides porin protein compare
ECD_01946 +0.6 1.5 dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit compare
ECD_03017 +0.6 1.1 outer membrane lipoprotein compare
ECD_01925 +0.6 1.4 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
ECD_01320 +0.6 1.9 ATP-dependent RNA helicase, specific for 23S rRNA compare
ECD_01692 +0.6 1.1 6-phosphofructokinase II compare
ECD_00848 +0.6 1.4 bacteriophage tail fiber protein compare
ECD_00752 +0.6 0.8 molybdopterin synthase, large subunit compare
ECD_04030 +0.6 0.9 phosphatidylserine decarboxylase compare
ECD_00819 +0.6 3.3 hypothetical protein compare
ECD_00596 +0.6 1.4 TatABCE protein translocation system subunit compare
ECD_01443 +0.6 1.1 D,D-dipeptide ABC transporter permease compare
ECD_01408 +0.6 2.6 putative iron outer membrane transporter compare
ECD_01435 +0.6 1.3 putative DNA-binding transcriptional regulator compare
ECD_01804 +0.6 1.8 inner membrane PqiA domain protein compare
ECD_01012 +0.6 1.6 putative reactive intermediate detoxifying aminoacrylate hydrolase compare
ECD_01253 +0.6 1.7 aconitate hydratase 1; aconitase A compare
ECD_00968 +0.6 2.0 UPF0319 family protein compare
ECD_03695 +0.6 0.9 Magnesium and cobalt transport protein corA compare
ECD_01746 +0.6 2.1 DUF1315 family protein compare
ECD_01161 +0.6 2.2 sodium:proton antiporter compare
ECD_00612 +0.6 1.6 DUF1451 family protein compare
ECD_01472 +0.6 1.1 autoinducer 2 import system permease protein compare
ECD_02404 +0.6 0.9 BamABCDE complex OM biogenesis lipoprotein compare
ECD_00399 +0.6 1.2 putative DNA-binding transcriptional regulator compare
ECD_02177 +0.6 1.3 nucleoside triphosphatase compare
ECD_01370 +0.6 1.1 aldehyde dehydrogenase A, NAD-linked compare
ECD_00834 +0.6 1.3 putative capsid scaffolding protein compare
ECD_01482 +0.6 1.0 succinate semialdehyde dehydrogenase, NAD(P)+-dependent compare
ECD_02103 +0.6 1.5 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein compare
ECD_01579 +0.5 2.2 inhibitor of replication at Ter, DNA-binding protein compare
ECD_00455 +0.5 1.5 ureidoglycolate lyase, releasing urea compare
ECD_00021 +0.5 1.5 putative usher protein compare
ECD_00868 +0.5 1.7 arginine transporter subunit compare
ECD_02132 +0.5 1.3 ferredoxin-type protein compare
ECD_02919 +0.5 1.3 motility and biofilm regulator compare
ECD_02584 +0.5 1.2 serine/threonine-specific protein phosphatase 2 compare
ECD_02951 +0.5 1.0 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_00951 +0.5 1.7 6-N-hydroxylaminopurine detoxification oxidoreductase compare
ECD_00228 +0.5 1.5 mRNA interferase toxin of the YafO-YafN toxin-antitoxin system compare
ECD_01175 +0.5 1.6 dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit compare
ECD_02349 +0.5 1.5 phosphate acetyltransferase compare
ECD_01786 +0.5 1.6 putative membrane protein/conserved protein compare
ECD_00904 +0.5 0.8 LysR family putative transcriptional regulator compare
ECD_00483 +0.5 1.8 FimA-like protein compare
ECD_01441 +0.5 0.7 D,D-dipeptide ABC transporter ATPase compare
ECD_02167 +0.5 2.1 anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit compare
ECD_00048 +0.5 1.4 putative 4Fe-4S ferredoxin-type protein compare
ECD_00255 +0.5 1.8 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein compare
ECD_02280 +0.5 1.0 hybrid sensory histidine kinase in two-component regulatory system with EvgA compare
ECD_02031 +0.5 1.4 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase compare
ECD_00655 +0.5 1.7 potassium translocating ATPase, subunit A compare
ECD_03405 +0.5 1.7 HTH_CROC1 family putative transcriptional regulator compare
ECD_03022 +0.5 0.7 GIY-YIG nuclease superfamily protein compare
ECD_03433 +0.5 1.5 3-keto-L-gulonate 6-phosphate decarboxylase compare
ECD_01048 +0.5 0.8 multicopy suppressor of secY and secA compare
ECD_01305 +0.5 1.4 S9-like protein non-peptidase family protein compare
ECD_01733 +0.5 1.5 selenophosphate synthase compare
ECD_02128 +0.5 1.7 heme export ABC transporter ATPase compare
ECD_00792 +0.5 1.7 fructose-6-phosphate aldolase 1 compare
ECD_02288 +0.5 1.2 palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase compare
ECD_02820 +0.5 0.8 hypothetical protein compare
ECD_00190 +0.5 2.5 alternative stalled-ribosome rescue factor B; peptidyl-tRNA hydrolase, ribosome-attached compare
ECD_02718 +0.5 1.3 putative 4Fe-4S ferredoxin-type oxidoreductase subunit compare
ECD_01882 +0.5 1.9 glyoxalase III and Hsp31 molecular chaperone compare
ECD_02900 +0.5 2.3 NADPH quinone reductase compare
ECD_01795 +0.5 1.7 putative inner membrane protein compare
ECD_01863 +0.5 0.9 flagellar class II regulon transcriptional activator, with FlhC compare
ECD_04145 +0.5 1.6 IS911 protein compare
ECD_01589 +0.5 0.8 transcriptional repressor of Mal regulon compare
ECD_00614 +0.5 1.7 uncharacterized protein compare
ECD_00374 +0.5 0.8 phage Phi6 host factor, ATP/GTP binding protein compare
ECD_01912 +0.5 1.3 DNA gyrase inhibitor compare
ECD_00496 +0.5 0.8 DLP12 prophage; putative DNA-binding transcriptional regulator compare
ECD_00993 +0.5 0.7 cold shock gene compare
ECD_00300 +0.5 2.5 mhp operon transcriptional activator compare
ECD_01642 +0.5 1.5 putative oxidoreductase subunit compare
ECD_00900 +0.5 1.2 dimethyl sulfoxide reductase, anaerobic, subunit C compare
ECD_02774 +0.4 1.2 Zn-dependent metalloprotease-related protein compare
ECD_01049 +0.4 1.2 putative drug efflux system protein compare
ECD_00843 +0.4 1.1 phage baseplate assembly protein compare
ECD_01230 +0.4 0.6 outer membrane protein W compare
ECD_03805 +0.4 2.5 DUF1454 family putative periplasmic protein compare
ECD_01696 +0.4 1.0 2-deoxyglucose-6-P phosphatase compare
ECD_00040 +0.4 1.6 carnitinyl-CoA dehydratase compare
ECD_01034 +0.4 0.5 curli production assembly/transport outer membrane lipoprotein compare
ECD_04051 +0.4 0.8 UPF0719 family inner membrane protein compare
ECD_02091 +0.4 0.9 ribonucleoside hydrolase 2 compare
ECD_01352 +0.4 1.0 fermentative D-lactate dehydrogenase, NAD-dependent compare
ECD_01737 +0.4 1.0 nicotinamidase/pyrazinamidase compare
ECD_01109 +0.4 0.7 L,D-transpeptidase linking Lpp to murein compare
ECD_01061 +0.4 1.3 multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin compare
ECD_00139 +0.4 1.6 putative periplasmic pilin chaperone compare
ECD_01221 +0.4 0.8 oligopeptide ABC transporter ATPase compare
ECD_01238 +0.4 1.8 component I of anthranilate synthase compare
ECD_01866 +0.4 1.2 trehalose-6-phosphate phosphatase, biosynthetic compare
ECD_03867 +0.4 1.5 thiamine biosynthesis ThiGH complex subunit compare
ECD_01852 +0.4 1.0 chemotaxis regulator, protein phosphatase for CheY compare
ECD_02477 +0.4 0.9 DTW domain protein compare
ECD_00402 +0.4 0.9 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB compare
ECD_02287 +0.4 1.0 DUF2545 family putative inner membrane protein compare
ECD_00315 +0.4 1.7 taurine ABC transporter periplasmic binding protein compare
ECD_03073 +0.4 2.0 biosynthetic peptidoglycan transglycosylase compare
ECD_01947 +0.4 1.3 dTDP-glucose 4,6 dehydratase, NAD(P)-binding compare
ECD_01893 +0.4 1.3 shikimate transporter compare
ECD_03412 +0.4 1.8 uncharacterized protein compare
ECD_00405 +0.4 1.3 outer membrane lipoprotein compare
ECD_04119 +0.4 0.6 SopA-central-domain-like hexapeptide repeat protein compare
ECD_00830 +0.4 1.0 hypothetical protein compare
ECD_03977 +0.4 1.4 phosphonate ABC transporter ATPase compare
ECD_02456 +0.4 0.8 putative 4Fe-4S cluster-containing protein compare
ECD_01886 +0.4 0.9 membrane-anchored, periplasmic TMAO, DMSO reductase compare
ECD_01290 +0.4 1.0 putative Zn-dependent NAD(P)-binding oxidoreductase compare
ECD_02258 +0.4 0.6 putative fimbrial-like adhesin protein compare
ECD_01148 +0.4 1.1 hypothetical protein compare
ECD_01318 +0.4 1.3 diguanylate cyclase, csgD regulator compare
ECD_00152 +0.4 1.7 iron(3+)-hydroxamate import ABC transporter permease compare
ECD_03021 +0.4 0.7 UPF0306 family protein compare
ECD_01292 +0.4 1.6 putative NADH-binding oxidoreductase compare
ECD_00594 +0.4 1.2 fluoride efflux channel, dual topology membrane protein compare
ECD_00444 +0.4 1.9 putative oxidoreductase compare
ECD_02436 +0.4 1.2 mutarotase superfamily protein, YphB family compare
ECD_03132 +0.4 0.8 dehydroshikimate reductase, NAD(P)-binding compare
ECD_02977 +0.4 1.8 putative L-serine dehydratase alpha chain compare
ECD_01273 +0.4 0.7 putrescine importer compare
ECD_02309 +0.4 1.3 putative inorganic ion transporter compare
ECD_02524 +0.4 1.4 DUF2892 family inner membrane rhodanese compare
ECD_01096 +0.4 1.2 putative DNase compare
ECD_01856 +0.4 1.7 methyl-accepting protein IV compare
ECD_04273 +0.4 2.0 putative periplasmic protein compare
ECD_00999 +0.4 1.5 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit compare
ECD_01928 +0.4 0.8 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase compare
ECD_01706 +0.4 0.6 N,N'-diacetylchitobiose-specific enzyme IIC component of PTS compare
ECD_00466 +0.4 1.8 allantoate amidohydrolase compare
ECD_01779 +0.4 0.8 putative reactive intermediate deaminase compare
ECD_03999 +0.4 0.6 antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA compare
ECD_00506 +0.4 1.0 DLP12 prophage; putative phage lysis protein compare
ECD_01399 +0.4 0.5 putative ABC transporter permease compare
ECD_02968 +0.4 1.6 DUF1469 family inner membrane protein compare
ECD_02245 +0.4 1.6 erythronate-4-phosphate dehydrogenase compare
ECD_01713 +0.4 0.7 succinylglutamate desuccinylase compare
ECD_02242 +0.4 1.6 DedA family inner membrane protein compare
ECD_03966 +0.4 1.5 ribose 1,5-bisphosphokinase compare
ECD_01749 +0.4 0.6 D-hexose-6-phosphate epimerase-like protein compare
ECD_02135 +0.4 0.9 ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA compare
ECD_01163 +0.3 1.2 SpoVR family stationary phase protein compare
ECD_00291 +0.3 1.7 cytosine/isoguanine deaminase compare
ECD_02825 +0.3 0.6 Pyrophosphorylase compare
ECD_00532 +0.3 0.7 response regulator in two-component regulatory system with CusS compare
ECD_01878 +0.3 1.3 excinuclease UvrABC, endonuclease subunit compare
ECD_04243 +0.3 2.2 bgl operon transcriptional activator compare
ECD_01300 +0.3 1.2 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase compare
ECD_04193 +0.3 0.6 fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor compare
ECD_00950 +0.3 0.7 FtsZ stabilizer compare
ECD_01427 +0.3 0.4 nitrate/nitrite transporter compare
ECD_02101 +0.3 0.7 elongation factor P-like protein compare
ECD_01248 +0.3 1.1 inner membrane protein, S49 peptidase family protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments