Experiment set8S188 for Escherichia coli BL21

Compare to:

JK16

200 most detrimental genes:

  gene name fitness t score description  
ECD_01277 +1.4 2.8 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase compare
ECD_02951 +1.3 2.3 antitoxinof the HigB-HigA toxin-antitoxin system compare
ECD_03358 +1.1 1.9 stress response protein acid-resistance protein compare
ECD_00802 +1.0 2.4 ribosomal protein S12 methylthiotransferase compare
ECD_01003 +1.0 3.3 DnaK co-chaperone; curved DNA-binding protein compare
ECD_02028 +0.9 2.2 putative kinase compare
ECD_01391 +0.9 2.7 BenE family inner membrane putative transporter compare
ECD_00862 +0.9 2.6 putrescine ABC transporter permease compare
ECD_01779 +0.9 1.6 putative reactive intermediate deaminase compare
ECD_00807 +0.9 1.5 deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx compare
ECD_01048 +0.9 1.1 multicopy suppressor of secY and secA compare
ECD_01746 +0.9 2.5 DUF1315 family protein compare
ECD_03093 +0.9 1.9 DUF1043 family inner membrane-anchored protein compare
ECD_00955 +0.8 1.5 paraquat-inducible, SoxRS-regulated MCE domain protein compare
ECD_01042 +0.8 1.8 O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit compare
ECD_01235 +0.8 2.2 tryptophan synthase, beta subunit compare
ECD_04119 +0.8 1.4 SopA-central-domain-like hexapeptide repeat protein compare
ECD_01401 +0.8 1.7 gamma-aminobutyraldehyde dehydrogenase compare
ECD_03352 +0.8 2.9 arsenate reductase compare
ECD_03022 +0.8 2.5 GIY-YIG nuclease superfamily protein compare
ECD_02899 +0.8 1.3 inner membrane protein compare
ECD_01247 +0.7 2.0 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase compare
ECD_00442 +0.7 1.1 iron export ABC transporter permease; peroxide resistance protein compare
ECD_01529 +0.7 1.5 Qin prophage; uncharacterized protein compare
ECD_03813 +0.7 1.8 FtsZ stabilizer, septal ring assembly factor, cell division stimulator compare
ECD_01250 +0.7 1.2 DNA topoisomerase I, omega subunit compare
ECD_00502 +0.7 1.5 DLP12 prophage; putative antitermination protein compare
ECD_03999 +0.7 1.7 antitoxin of GhoTS toxin-antitoxin pair; endonuclease for ghoT mRNA compare
ECD_01315 +0.7 1.7 p-aminobenzoyl-glutamate hydrolase, A subunit compare
ECD_01763 +0.7 1.2 diguanylate cyclase compare
ECD_02746 +0.7 1.6 hypothetical protein compare
ECD_03659 +0.7 1.1 thioredoxin 1 compare
ECD_01107 +0.7 1.5 repressor for bhsA(ycfR) compare
ECD_00950 +0.7 1.5 FtsZ stabilizer compare
ECD_02736 +0.7 2.2 glycine cleavage complex lipoylprotein compare
ECD_00655 +0.7 2.2 potassium translocating ATPase, subunit A compare
ECD_00861 +0.7 2.5 putrescine ABC transporter permease compare
ECD_01067 +0.7 1.4 anti-sigma factor for FliA (sigma 28) compare
ECD_03064 +0.7 1.1 periplasmic membrane-anchored LPS-binding protein; LPS export protein compare
ECD_01838 +0.7 2.2 isochorismatase family protein compare
ECD_01312 +0.6 1.3 O-6-alkylguanine-DNA:cysteine-protein methyltransferase compare
ECD_00569 +0.6 2.3 Spo0J family protein, ParB-like nuclease domain compare
ECD_02292 +0.6 2.7 putative DNA-binding protein compare
ECD_01443 +0.6 1.6 D,D-dipeptide ABC transporter permease compare
ECD_01118 +0.6 1.6 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_02297 +0.6 1.3 putative enzyme IIB component of PTS compare
ECD_01093 +0.6 2.7 septation protein, ampicillin sensitivity compare
ECD_03508 +0.6 1.5 tRNA mG18-2'-O-methyltransferase, SAM-dependent compare
ECD_02404 +0.6 0.6 BamABCDE complex OM biogenesis lipoprotein compare
ECD_02377 +0.6 1.3 hydrogenase 4, membrane subunit compare
ECD_03453 +0.6 1.3 DUF3302 family inner membrane protein compare
ECD_04270 +0.6 1.6 non-canonical purine NTP phosphatase, ITPase/XTPase compare
ECD_01977 +0.6 1.1 ser/thr phosphatase-related protein compare
ECD_02853 +0.6 1.8 hypothetical protein compare
ECD_01426 +0.6 2.1 nitrate reductase 2 (NRZ), alpha subunit compare
ECD_01835 +0.6 1.0 UPF0082 family protein compare
ECD_01968 +0.6 2.1 colanic acid export protein; outer membrane auxillary lipoprotein compare
ECD_01055 +0.6 1.9 N-methyltryptophan oxidase, FAD-binding compare
ECD_00269 +0.6 1.5 choline-inducible betIBA-betT divergent operon transcriptional repressor compare
ECD_02995 +0.6 2.1 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system compare
ECD_01498 +0.6 1.0 NADP-dependent 3-hydroxy acid dehydrogenase; malonic semialdehyde reductase compare
ECD_04048 +0.6 1.5 DUF2170 family protein compare
ECD_02061 +0.5 1.3 putative ABC transporter periplasmic binding protein compare
ECD_02300 +0.5 1.6 DUF2502 family putative periplasmic protein compare
ECD_00834 +0.5 1.2 putative capsid scaffolding protein compare
ECD_02091 +0.5 1.3 ribonucleoside hydrolase 2 compare
ECD_00602 +0.5 2.5 septal ring protein, suppressor of prc, minor lipoprotein compare
ECD_00242 +0.5 1.2 moco insertion factor for PaoABC aldehyde oxidoreductase compare
ECD_02318 +0.5 1.1 pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase compare
ECD_04384 +0.5 1.8 small predicted membrane protein compare
ECD_01059 +0.5 1.4 lipoprotein, DUF1439 family compare
ECD_01623 +0.5 1.7 putative ATP-dependent helicase compare
ECD_01441 +0.5 1.0 D,D-dipeptide ABC transporter ATPase compare
ECD_03987 +0.5 2.1 adi system transcriptional activator compare
ECD_02382 +0.5 1.3 putative processing element hydrogenase 4 compare
ECD_00402 +0.5 1.1 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB compare
ECD_01258 +0.5 0.9 orotidine-5'-phosphate decarboxylase compare
ECD_00461 +0.5 2.2 putative allantoin transporter compare
ECD_03187 +0.5 2.0 bacterioferritin, iron storage and detoxification protein compare
ECD_00513 +0.5 2.1 hypothetical protein compare
ECD_04373 +0.5 1.7 UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system compare
ECD_01845 +0.5 1.6 copper homeostasis protein compare
ECD_02328 +0.5 2.0 N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase compare
ECD_00556 +0.5 1.0 iron-enterobactin ABC transporter permease compare
ECD_00054 +0.5 1.0 protein associated with Co2+ and Mg2+ efflux compare
ECD_01879 +0.5 0.7 response regulator in two-component regulatory system with BarA compare
ECD_01400 +0.5 1.3 putative ABC transporter permease compare
ECD_01559 +0.5 1.3 oxidoreductase, membrane subunit compare
ECD_04185 +0.5 0.6 periplasmic chaperone compare
ECD_02529 +0.5 1.2 hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein compare
ECD_00695 +0.5 0.9 putative inner membrane protein in cydABX-ybgE operon compare
ECD_03591 +0.5 1.4 tryptophanase leader peptide compare
ECD_02556 +0.5 2.1 sorbitol-responsive srl operon transcriptional activator compare
ECD_00651 +0.5 1.1 response regulator in two-component regulatory system with KdpD compare
ECD_01562 +0.5 1.5 putative dethiobiotin synthetase compare
ECD_04308 +0.5 1.3 uncharacterized protein compare
ECD_01168 +0.5 0.3 lytic murein endotransglycosylase E compare
ECD_03785 +0.5 0.9 putative enzyme IIA component of PTS compare
ECD_01803 +0.5 1.7 free methionine-(R)-sulfoxide reductase compare
ECD_01492 +0.5 1.5 cysteine and O-acetyl-L-serine efflux system compare
ECD_02319 +0.5 2.2 uncharacterized protein compare
ECD_01290 +0.4 1.2 putative Zn-dependent NAD(P)-binding oxidoreductase compare
ECD_01610 +0.4 1.7 anhydro-N-acetylmuramic acid kinase compare
ECD_01064 +0.4 1.1 putative oxidoreductase compare
ECD_00946 +0.4 1.2 putative fimbriae protein compare
ECD_01365 +0.4 0.8 putative esterase compare
ECD_00750 +0.4 1.6 molybdopterin biosynthesis, protein C compare
ECD_00757 +0.4 1.9 endo/exonuclease/phosphatase family protein compare
ECD_01860 +0.4 1.4 protein that enables flagellar motor rotation compare
ECD_03660 +0.4 0.7 rho operon leader peptide compare
ECD_02584 +0.4 0.9 serine/threonine-specific protein phosphatase 2 compare
ECD_00394 +0.4 1.6 putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein compare
ECD_04141 +0.4 1.6 putative MFS transporter, membrane protein compare
ECD_00996 +0.4 1.7 hybrid sensory histidine kinase in two-component regulatory system with TorR compare
ECD_02131 +0.4 1.7 ferredoxin-type protein compare
ECD_03019 +0.4 2.3 putative nucleoside-diphosphate-sugar epimerase compare
ECD_00818 +0.4 0.9 hypothetical protein compare
ECD_02285 +0.4 0.8 uncharacterized protein compare
ECD_00441 +0.4 1.5 iron export ABC transporter ATPase; peroxide resistance protein compare
ECD_03998 +0.4 0.7 GNAT family putative N-acetyltransferase compare
ECD_02963 +0.4 2.1 hexuronate regulon transcriptional repressor; autorepressor compare
ECD_00623 +0.4 1.9 glutamate/aspartate periplasmic binding protein compare
ECD_04357 +0.4 1.9 small predicted membrane protein compare
ECD_00056 +0.4 1.8 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent compare
ECD_02792 +0.4 0.6 oxidative damage protective factor for iron-sulfur proteins compare
ECD_01225 +0.4 0.9 putative DGPF domain-containing enzyme compare
ECD_04303 +0.4 1.3 KGG family protein compare
ECD_03963 +0.4 1.4 putative periplasmic protein compare
ECD_01601 +0.4 0.6 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_02044 +0.4 1.0 methionyl-tRNA synthetase compare
ECD_04392 +0.4 1.3 uncharacterized protein compare
ECD_01488 +0.4 0.9 putative phage protein compare
ECD_01478 +0.4 0.5 altronate oxidoreductase, NAD-dependent compare
ECD_03353 +0.4 1.0 hypothetical protein compare
ECD_00626 +0.4 1.4 putative ion transport compare
ECD_01427 +0.4 0.9 nitrate/nitrite transporter compare
ECD_01735 +0.4 1.3 protease IV (signal peptide peptidase) compare
ECD_04227 +0.4 2.1 5-carboxymethyl-2-hydroxymuconate delta-isomerase compare
ECD_02174 +0.4 1.1 putative DNA-binding transcriptional regulator for the rhm operon compare
ECD_04362 +0.4 0.7 hypothetical protein compare
ECD_00900 +0.4 1.0 dimethyl sulfoxide reductase, anaerobic, subunit C compare
ECD_02439 +0.4 2.1 putative sugar ABC transporter ATPase compare
ECD_02350 +0.4 1.0 cobalamin adenosyltransferase involved in ethanolamine utilization compare
ECD_00430 +0.4 1.8 putative fosmidomycin efflux system protein compare
ECD_00925 +0.4 0.8 putative S-adenosyl-L-methionine-dependent methyltransferase compare
ECD_01155 +0.4 1.5 putative isomerase/hydrolase compare
ECD_00577 +0.4 2.1 putative Zn-dependent NAD(P)-binding oxidoreductase compare
ECD_00838 +0.4 1.1 putative phage tail protein compare
ECD_04129 +0.4 2.1 DUF853 family protein with NTPase fold compare
ECD_01211 +0.4 1.4 PcnB-degradosome interaction factor; response regulator compare
ECD_01276 +0.4 1.7 repressor for the divergent puu operons, putrescine inducible compare
ECD_01486 +0.4 0.8 UPF0056 family inner membrane protein compare
ECD_00594 +0.4 1.1 fluoride efflux channel, dual topology membrane protein compare
ECD_03129 +0.4 1.4 putative amino acid ABC transporter ATPase compare
ECD_00696 +0.4 1.7 acyl-CoA thioester hydrolase compare
ECD_03295 +0.4 1.7 stable heat shock chaperone compare
ECD_02177 +0.4 0.9 nucleoside triphosphatase compare
ECD_02867 +0.4 1.7 protein involved with the maturation of hydrogenases 1 and 2 compare
ECD_01604 +0.4 1.3 dipeptide and tripeptide permease A compare
ECD_02322 +0.4 1.5 sulfate/thiosulfate transporter subunit compare
ECD_03206 +0.4 3.1 putative phosphoribulokinase compare
ECD_00993 +0.4 0.6 cold shock gene compare
ECD_00653 +0.4 1.1 potassium translocating ATPase, subunit C compare
ECD_01716 +0.4 0.7 arginine succinyltransferase compare
ECD_00981 +0.4 1.4 cytochrome bd-II oxidase, subunit I compare
ECD_00579 +0.4 1.9 ribonuclease I compare
ECD_02294 +0.4 1.6 aminopeptidase compare
ECD_02351 +0.4 1.1 RmlC-like cupin domain protein compare
ECD_01584 +0.4 1.0 putative outer membrane porin for beta-glucuronides porin protein compare
ECD_02349 +0.4 1.1 phosphate acetyltransferase compare
ECD_02783 +0.4 1.8 UPF0235 family protein compare
ECD_03181 +0.4 1.5 general secretory pathway component, cryptic compare
ECD_02038 +0.4 0.6 hypothetical protein compare
ECD_00287 +0.4 2.1 2-methylcitrate synthase compare
ECD_00367 +0.4 1.2 2-carboxybenzaldehyde reductase compare
ECD_02127 +0.4 1.2 heme export ABC transporter permease compare
ECD_02148 +0.4 1.2 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit compare
ECD_03997 +0.4 1.1 putative 4Fe-4S mono-cluster protein compare
ECD_00774 +0.4 1.0 23S rRNA m(6)A1618 methyltransferase, SAM-dependent compare
ECD_03122 +0.4 1.1 acrAB operon transcriptional repressor compare
ECD_00876 +0.4 1.2 pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding compare
ECD_04264 +0.4 1.7 3-phosphoserine phosphatase compare
ECD_01695 +0.4 0.6 putative inner membrane protein compare
ECD_01627 +0.4 0.9 putative MFS transporter, inner membrane protein compare
ECD_02100 +0.4 1.0 UPF0153 cysteine cluster protein compare
ECD_02618 +0.4 1.1 putative SDR family oxidoreductase compare
ECD_01241 +0.4 0.7 putative RNA binding protein compare
ECD_03543 +0.4 2.1 EamA family inner membrane putative transporter compare
ECD_00954 +0.4 1.1 paraquat-inducible, SoxRS-regulated inner membrane protein compare
ECD_01314 +0.4 1.3 p-aminobenzoyl-glutamate hydrolase, B subunit compare
ECD_01018 +0.4 0.9 proline:sodium symporter compare
ECD_02394 +0.4 1.2 exopolyphosphatase compare
ECD_00983 +0.4 1.3 phosphoanhydride phosphorylase compare
ECD_01313 +0.4 1.2 p-aminobenzoyl-glutamate transporter; membrane protein compare
ECD_04174 +0.4 2.1 UPF0386 family protein compare
ECD_04049 +0.4 0.7 PspA/IM30 family protein compare
ECD_04084 +0.4 0.7 DUF24 family HxlR-type putative transcriptional regulator compare
ECD_01614 +0.4 0.9 putative membrane fusion protein (MFP) of YdhJK efflux pump compare
ECD_03073 +0.4 1.5 biosynthetic peptidoglycan transglycosylase compare
ECD_03969 +0.3 1.5 carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms