Experiment set8S187 for Escherichia coli BL21

Compare to:

JK16

200 most detrimental genes:

  gene name fitness t score description  
ECD_01529 +1.3 3.0 Qin prophage; uncharacterized protein compare
ECD_03207 +1.2 3.0 OsmC family protein compare
ECD_03813 +1.1 2.9 FtsZ stabilizer, septal ring assembly factor, cell division stimulator compare
ECD_01779 +1.1 2.0 putative reactive intermediate deaminase compare
ECD_02377 +1.0 2.5 hydrogenase 4, membrane subunit compare
ECD_01067 +1.0 2.3 anti-sigma factor for FliA (sigma 28) compare
ECD_03122 +1.0 3.1 acrAB operon transcriptional repressor compare
ECD_01012 +1.0 1.1 putative reactive intermediate detoxifying aminoacrylate hydrolase compare
ECD_01852 +1.0 2.0 chemotaxis regulator, protein phosphatase for CheY compare
ECD_00380 +0.9 1.6 cytochrome o ubiquinol oxidase subunit IV compare
ECD_01240 +0.9 1.6 PHP domain protein compare
ECD_04019 +0.9 1.4 entericidin B membrane lipoprotein compare
ECD_01400 +0.9 2.6 putative ABC transporter permease compare
ECD_03997 +0.9 2.8 putative 4Fe-4S mono-cluster protein compare
ECD_02310 +0.9 1.7 DUF3820 family protein compare
ECD_03358 +0.8 1.4 stress response protein acid-resistance protein compare
ECD_02028 +0.8 1.8 putative kinase compare
ECD_01746 +0.8 2.7 DUF1315 family protein compare
ECD_01565 +0.8 1.8 putative arabinose efflux transporter compare
ECD_00367 +0.8 2.3 2-carboxybenzaldehyde reductase compare
ECD_01586 +0.8 1.7 beta-D-glucuronidase compare
ECD_00402 +0.8 2.0 nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB compare
ECD_01277 +0.8 1.4 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase compare
ECD_02345 +0.8 2.1 ethanolamine utilization protein, HSP70/actin superfamily protein compare
ECD_01441 +0.8 1.3 D,D-dipeptide ABC transporter ATPase compare
ECD_01557 +0.8 2.4 S- and N-oxide reductase, A subunit, periplasmic compare
ECD_03357 +0.8 1.3 acid-resistance protein compare
ECD_02477 +0.8 2.1 DTW domain protein compare
ECD_00461 +0.7 3.5 putative allantoin transporter compare
ECD_01601 +0.7 1.1 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_00311 +0.7 1.9 regulator protein that represses frmRAB operon compare
ECD_01003 +0.7 1.9 DnaK co-chaperone; curved DNA-binding protein compare
ECD_01869 +0.7 2.1 L-arabinose ABC transporter periplasmic binding protein compare
ECD_02136 +0.7 2.5 ecotin, a serine protease inhibitor compare
ECD_00274 +0.7 1.6 ankyrin repeat protein compare
ECD_00802 +0.7 0.8 ribosomal protein S12 methylthiotransferase compare
ECD_01042 +0.7 1.4 O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit compare
ECD_01427 +0.7 1.5 nitrate/nitrite transporter compare
ECD_03436 +0.7 2.7 putative regulatory protein compare
ECD_01970 +0.6 2.4 suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane-anchored periplasmic protein compare
ECD_01301 +0.6 1.5 lipid hydroperoxide peroxidase compare
ECD_04051 +0.6 1.4 UPF0719 family inner membrane protein compare
ECD_00749 +0.6 1.7 inactive molybdopterin adenylyltransferase compare
ECD_02529 +0.6 1.6 hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein compare
ECD_02736 +0.6 2.0 glycine cleavage complex lipoylprotein compare
ECD_02231 +0.6 1.7 histidine ABC transporter ATPase compare
ECD_02416 +0.6 1.6 Fe(2+) donor and activity modulator for cysteine desulfurase compare
ECD_03429 +0.6 2.6 2,3-diketo-L-gulonate TRAP transporter small permease protein compare
ECD_00616 +0.6 1.5 Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor compare
ECD_01255 +0.6 1.9 phosphatidylglycerophosphatase B compare
ECD_04339 +0.6 1.9 stress-induced small enterobacterial protein compare
ECD_01926 +0.6 2.0 N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase compare
ECD_02349 +0.6 1.8 phosphate acetyltransferase compare
ECD_01452 +0.6 1.0 putative periplasmic M16 family zinc metalloendopeptidase compare
ECD_02909 +0.6 2.0 DUF1190 family protein compare
ECD_02140 +0.6 1.7 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase compare
ECD_02582 +0.6 2.6 uncharacterized protein compare
ECD_01724 +0.6 1.8 putative ABC transporter permease compare
ECD_01064 +0.6 1.3 putative oxidoreductase compare
ECD_02322 +0.6 2.0 sulfate/thiosulfate transporter subunit compare
ECD_01864 +0.6 1.5 universal stress protein compare
ECD_00768 +0.5 2.2 putative dehydrogenase compare
ECD_00531 +0.5 1.9 copper-sensing histidine kinase in two-component regulatory system with CusR compare
ECD_00196 +0.5 2.6 DL-methionine transporter subunit compare
ECD_00452 +0.5 2.0 putative DNA-binding transcriptional regulator compare
ECD_02292 +0.5 2.2 putative DNA-binding protein compare
ECD_03001 +0.5 0.5 putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine/galactosamine PTS system enzyme IIA component) compare
ECD_03977 +0.5 1.7 phosphonate ABC transporter ATPase compare
ECD_02155 +0.5 1.0 DUF1175 family protein, putative host defense protein compare
ECD_01860 +0.5 1.4 protein that enables flagellar motor rotation compare
ECD_01963 +0.5 1.7 putative glycosyl transferase compare
ECD_01650 +0.5 1.6 component of SufBCD Fe-S cluster assembly scaffold compare
ECD_00501 +0.5 1.3 uncharacterized protein, DLP12 prophage compare
ECD_02670 +0.5 1.5 exonuclease V (RecBCD complex), gamma chain compare
ECD_01237 +0.5 2.0 fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase compare
ECD_04391 +0.5 1.5 hypothetical protein compare
ECD_01912 +0.5 1.4 DNA gyrase inhibitor compare
ECD_00658 +0.5 1.0 Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor compare
ECD_01835 +0.5 0.9 UPF0082 family protein compare
ECD_02348 +0.5 1.2 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_01681 +0.5 0.9 integration host factor (IHF), DNA-binding protein, alpha subunit compare
ECD_01188 +0.5 0.8 SIRB family inner membrane protein compare
ECD_01287 +0.5 1.6 putative ABC sugar transporter periplasmic binding protein compare
ECD_04147 +0.5 1.9 hypothetical protein compare
ECD_00867 +0.5 1.2 arginine ABC transporter permease compare
ECD_01914 +0.5 1.3 exodeoxyribonuclease I; exonuclease I compare
ECD_00993 +0.5 0.8 cold shock gene compare
ECD_01896 +0.5 0.9 putative multdrug exporter, MATE family compare
ECD_01425 +0.5 1.2 nitrate reductase 2 (NRZ), beta subunit compare
ECD_02424 +0.5 1.6 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent compare
ECD_04384 +0.5 1.7 small predicted membrane protein compare
ECD_00752 +0.5 0.6 molybdopterin synthase, large subunit compare
ECD_03458 +0.5 2.3 ribosome-associated DUF2810 family protein compare
ECD_01225 +0.5 1.1 putative DGPF domain-containing enzyme compare
ECD_01097 +0.5 2.2 fused glucose-specific PTS enzymes: IIB component/IIC component compare
ECD_03022 +0.5 1.5 GIY-YIG nuclease superfamily protein compare
ECD_01479 +0.5 0.9 putative membrane-bound diguanylate cyclase compare
ECD_02024 +0.5 1.7 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit compare
ECD_01309 +0.5 1.7 DUF2534 family putative inner membrane protein compare
ECD_02152 +0.5 1.7 DUF2135 family protein, putative host defense protein compare
ECD_00696 +0.5 1.6 acyl-CoA thioester hydrolase compare
ECD_02151 +0.5 1.8 acetyl-CoA acetyltransferase compare
ECD_02118 +0.5 1.8 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor compare
ECD_03220 +0.5 1.1 small lipoprotein compare
ECD_01572 +0.5 0.8 pyridine nucleotide transhydrogenase, alpha subunit compare
ECD_00861 +0.5 1.5 putrescine ABC transporter permease compare
ECD_01235 +0.5 1.2 tryptophan synthase, beta subunit compare
ECD_00974 +0.5 1.7 Modulator of FtsH protease, inner membrane protein compare
ECD_01737 +0.4 1.0 nicotinamidase/pyrazinamidase compare
ECD_01058 +0.4 1.0 dihydro-orotase compare
ECD_02163 +0.4 1.2 acid-inducible Kdo/WaaP family putative kinase compare
ECD_01391 +0.4 1.4 BenE family inner membrane putative transporter compare
ECD_03143 +0.4 1.8 zntA gene transcriptional activator compare
ECD_01166 +0.4 1.2 putative cation/proton antiporter compare
ECD_04086 +0.4 1.6 3'(2'),5'-bisphosphate nucleotidase compare
ECD_00430 +0.4 2.1 putative fosmidomycin efflux system protein compare
ECD_00949 +0.4 1.2 dihydro-orotate oxidase, FMN-linked compare
ECD_01694 +0.4 1.1 fructosamine kinase family protein compare
ECD_02285 +0.4 0.8 uncharacterized protein compare
ECD_04195 +0.4 1.5 RpoS stabilzer after DNA damage, anti-RssB factor compare
ECD_03353 +0.4 0.6 hypothetical protein compare
ECD_02918 +0.4 0.8 fimbrial protein compare
ECD_01782 +0.4 1.1 aminodeoxychorismate synthase, subunit I compare
ECD_01700 +0.4 0.9 cell division modulator compare
ECD_01482 +0.4 0.8 succinate semialdehyde dehydrogenase, NAD(P)+-dependent compare
ECD_00909 +0.4 2.0 ribosomal protein S12 methylthiotransferase accessory factor compare
ECD_01671 +0.4 1.7 phosphoenolpyruvate synthase compare
ECD_01015 +0.4 1.6 pyrimidine oxygenase, FMN-dependent compare
ECD_01006 +0.4 0.8 uncharacterized protein compare
ECD_02995 +0.4 1.4 toxin of the SohB(PrlF)-YhaV toxin-antitoxin system compare
ECD_01109 +0.4 0.8 L,D-transpeptidase linking Lpp to murein compare
ECD_04159 +0.4 1.1 RNA polymerase sigma-19 factor, fec operon-specific; ECF sigma factor compare
ECD_00960 +0.4 0.9 Ter macrodomain organizer matS-binding protein compare
ECD_00556 +0.4 0.7 iron-enterobactin ABC transporter permease compare
ECD_03131 +0.4 1.3 DUF1488 family protein compare
ECD_02147 +0.4 1.3 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein compare
ECD_00660 +0.4 1.3 conserved protein, rhs-like protein compare
ECD_01827 +0.4 1.8 murein DD-endopeptidase, space-maker hydrolase, septation protein compare
ECD_01887 +0.4 1.0 inner membrane heme subunit for periplasmic YedYZ reductase compare
ECD_04270 +0.4 1.3 non-canonical purine NTP phosphatase, ITPase/XTPase compare
ECD_01695 +0.4 0.6 putative inner membrane protein compare
ECD_01314 +0.4 1.2 p-aminobenzoyl-glutamate hydrolase, B subunit compare
ECD_02389 +0.4 1.8 uracil permease compare
ECD_00254 +0.4 1.4 uncharacterized protein compare
ECD_03352 +0.4 1.3 arsenate reductase compare
ECD_02286 +0.4 0.7 putative lipoprotein involved in colanic acid biosynthesis compare
ECD_03181 +0.4 1.5 general secretory pathway component, cryptic compare
ECD_00157 +0.4 1.1 vitamin B12 ABC transporter periplasmic binding protein compare
ECD_02242 +0.4 1.1 DedA family inner membrane protein compare
ECD_00471 +0.4 1.6 putative carbonate kinase compare
ECD_00126 +0.4 1.7 putative ABC transporter ATPase compare
ECD_00358 +0.4 1.4 HNH nuclease family protein compare
ECD_00846 +0.4 1.3 hypothetical protein compare
ECD_04248 +0.4 2.0 ribosomal-protein-S18-alanine N-acetyltransferase compare
ECD_03304 +0.4 2.1 branched-chain amino acid ABC transporter ATPase compare
ECD_00954 +0.4 1.1 paraquat-inducible, SoxRS-regulated inner membrane protein compare
ECD_00775 +0.4 2.2 mechanosensitive channel protein, intermediate conductance compare
ECD_03187 +0.4 1.0 bacterioferritin, iron storage and detoxification protein compare
ECD_00876 +0.4 1.4 pyruvate dehydrogenase, thiamine triphosphate-binding, FAD-binding compare
ECD_04014 +0.4 1.8 DUF4156 family lipoprotein compare
ECD_00950 +0.4 0.8 FtsZ stabilizer compare
ECD_04183 +0.4 1.7 major type 1 subunit fimbrin (pilin) compare
ECD_01063 +0.4 1.0 UPF0502 family protein compare
ECD_01215 +0.4 2.0 fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase compare
ECD_02043 +0.4 1.7 antiporter inner membrane protein compare
ECD_01947 +0.4 0.9 dTDP-glucose 4,6 dehydratase, NAD(P)-binding compare
ECD_02109 +0.4 0.9 microcin C ABC transporter permease compare
ECD_00866 +0.4 1.7 arginine ABC transporter permease compare
ECD_02075 +0.4 1.1 dihydropyrimidine dehydrogenase, NADH-dependent, subunit N compare
ECD_03212 +0.4 0.9 stationary phase-induced protein, putative toxin compare
ECD_00269 +0.4 1.0 choline-inducible betIBA-betT divergent operon transcriptional repressor compare
ECD_00495 +0.4 1.3 inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein compare
ECD_01175 +0.4 1.0 dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit compare
ECD_02899 +0.4 0.6 inner membrane protein compare
ECD_01276 +0.4 1.5 repressor for the divergent puu operons, putrescine inducible compare
ECD_00281 +0.4 1.2 uncharacterized protein compare
ECD_03963 +0.4 1.5 putative periplasmic protein compare
ECD_03005 +0.4 1.0 N-acetylgalactosamine-specific enzyme IIB component of PTS compare
ECD_02439 +0.4 1.5 putative sugar ABC transporter ATPase compare
ECD_00407 +0.4 0.7 DUF1428 family protein compare
ECD_00500 +0.4 0.7 DLP12 prophage; endonuclease RUS compare
ECD_04346 +0.4 0.9 hypothetical protein compare
ECD_01980 +0.4 1.4 multidrug efflux system, subunit B compare
ECD_02622 +0.4 0.9 7-carboxy-7-deazaguanine synthase; queosine biosynthesis compare
ECD_01876 +0.4 1.1 UPF0149 family protein compare
ECD_00316 +0.4 1.6 taurine ABC transporter ATPase compare
ECD_02305 +0.4 0.8 DUF1323 family putative DNA-binding protein compare
ECD_03532 +0.3 1.4 hypothetical protein compare
ECD_03907 +0.3 2.0 maltose ABC transporter ATPase compare
ECD_02556 +0.3 1.5 sorbitol-responsive srl operon transcriptional activator compare
ECD_00633 +0.3 1.0 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor compare
ECD_01795 +0.3 1.0 putative inner membrane protein compare
ECD_04007 +0.3 1.9 divalent-cation tolerance protein, copper sensitivity compare
ECD_00473 +0.3 1.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
ECD_03940 +0.3 1.6 DUF485 family inner membrane protein compare
ECD_02135 +0.3 1.0 ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA compare
ECD_03506 +0.3 0.7 RNA polymerase, omega subunit compare
ECD_00994 +0.3 0.6 putative phosphatidylethanolamine synthesis regulator compare
ECD_01889 +0.3 0.8 cytochrome b561-like protein compare
ECD_02299 +0.3 1.6 putative ion channel protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms