Experiment set8S145 for Escherichia coli ECOR27

Compare to:

Mpec16

200 most important genes:

  gene name fitness t score description  
NOLOHH_06550 xerC -3.2 -4.1 tyrosine recombinase XerC compare
NOLOHH_05490 hupA -3.2 -2.4 DNA-binding protein HU-alpha compare
NOLOHH_07575 rfaF -2.9 -3.4 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_06530 corA -2.5 -5.7 magnesium/cobalt transporter CorA compare
NOLOHH_07535 rfaG -2.4 -7.5 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_01380 pgpA -2.4 -1.6 phosphatidylglycerophosphatase A compare
NOLOHH_20460 galU -2.4 -3.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_11495 xerD -2.3 -2.9 site-specific tyrosine recombinase XerD compare
NOLOHH_21130 yceD -2.3 -3.2 23S rRNA accumulation protein YceD compare
NOLOHH_08900 aroK -2.2 -2.3 shikimate kinase AroK compare
NOLOHH_05815 metL -2.2 -10.7 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_04525 miaA -2.2 -1.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
NOLOHH_23250 tolR -2.1 -3.1 colicin uptake protein TolR compare
NOLOHH_18800 lsrF -2.1 -2.5 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
NOLOHH_00560 -2.1 -2.4 phage portal protein compare
NOLOHH_03170 surA -2.0 -4.9 peptidylprolyl isomerase SurA compare
NOLOHH_23510 fur -1.9 -2.6 ferric iron uptake transcriptional regulator compare
NOLOHH_19500 tynA -1.8 -2.2 primary-amine oxidase compare
NOLOHH_13055 rseA -1.8 -2.9 anti-sigma-E factor RseA compare
NOLOHH_06665 wzyE -1.8 -5.6 ECA oligosaccharide polymerase compare
NOLOHH_23485 seqA -1.8 -2.0 replication initiation negative regulator SeqA compare
NOLOHH_09730 ptsN -1.8 -3.3 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_00620 -1.8 -2.1 Orf33, orf151, orf56, orf96, rus, orf45, orf8, orf127, and nmpC genes compare
NOLOHH_03190 apaH -1.8 -7.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_13075 lepA -1.8 -4.1 translation elongation factor 4 compare
NOLOHH_06675 wzxE -1.8 -4.7 lipid III flippase WzxE compare
NOLOHH_17630 btuD -1.7 -2.4 vitamin B12 ABC transporter ATP-binding protein BtuD compare
NOLOHH_24795 trbI -1.7 -1.8 type-F conjugative transfer system protein TrbI compare
NOLOHH_13865 crr -1.7 -1.9 PTS glucose transporter subunit IIA compare
NOLOHH_13310 hscA -1.7 -2.9 Fe-S protein assembly chaperone HscA compare
NOLOHH_06920 mnmG -1.7 -6.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_14340 ubiX -1.7 -3.1 flavin prenyltransferase UbiX compare
NOLOHH_16845 zwf -1.7 -1.8 glucose-6-phosphate dehydrogenase compare
NOLOHH_00385 -1.7 -3.7 hypothetical protein compare
NOLOHH_11365 rpiA -1.6 -2.5 ribose-5-phosphate isomerase RpiA compare
NOLOHH_23480 pgm -1.6 -3.0 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_21380 cgsE -1.6 -1.3 curli production assembly/transport protein CsgE compare
NOLOHH_17170 insQ -1.6 -1.5 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_16940 yebW -1.6 -2.9 Uncharacterized protein YebW compare
NOLOHH_15220 yohO -1.6 -1.4 protein YohO compare
NOLOHH_07125 -1.5 -3.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_01270 clpP -1.5 -2.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_09695 arcB -1.5 -5.0 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_12805 rnfH -1.4 -2.8 RnfH family protein compare
NOLOHH_17055 -1.4 -2.0 Cytoplasmic protein compare
NOLOHH_24675 finO -1.4 -5.6 Fertility inhibition protein compare
NOLOHH_09845 greA -1.4 -1.7 transcription elongation factor GreA compare
NOLOHH_14305 truA -1.4 -5.0 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_11120 yggT -1.4 -1.5 osmotic shock tolerance protein YggT compare
NOLOHH_13300 iscA -1.4 -1.9 iron-sulfur cluster assembly protein IscA compare
NOLOHH_13070 rseC -1.3 -3.3 SoxR-reducing system protein RseC compare
NOLOHH_10220 yhaL -1.3 -1.8 Uncharacterized protein YhaL compare
NOLOHH_05830 metJ -1.3 -1.2 met regulon transcriptional regulator MetJ compare
NOLOHH_18070 rsxB -1.3 -1.9 electron transport complex subunit RsxB compare
NOLOHH_18240 ynfL -1.3 -1.8 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_03030 cra -1.3 -5.6 catabolite repressor/activator compare
NOLOHH_07540 rfaP -1.2 -5.3 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_19510 feaR -1.2 -2.9 transcriptional regulator FeaR compare
NOLOHH_08375 pitA -1.2 -5.6 inorganic phosphate transporter PitA compare
NOLOHH_24755 -1.2 -1.1 toxin ArtA compare
NOLOHH_11670 escR -1.2 -1.1 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
NOLOHH_18245 mlc -1.2 -1.8 DNA-binding transcriptional repressor Mlc compare
NOLOHH_21500 -1.2 -1.7 hypothetical protein compare
NOLOHH_14515 nuoM -1.2 -4.4 NADH-quinone oxidoreductase subunit M compare
NOLOHH_18955 ddpX -1.2 -1.6 D-alanyl-D-alanine dipeptidase compare
NOLOHH_09590 argR -1.2 -3.7 transcriptional regulator ArgR compare
NOLOHH_18115 hdhA -1.2 -1.6 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_17400 ydjZ -1.1 -2.3 TVP38/TMEM64 family inner membrane protein YdjZ compare
NOLOHH_14475 nuoE -1.1 -2.2 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_16160 mtfA -1.1 -2.1 DgsA anti-repressor MtfA compare
NOLOHH_04490 nsrR -1.1 -5.9 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_24460 -1.1 -1.3 LngX2 compare
NOLOHH_09400 Thr_trna -1.1 -1.8 tRNA-Thr(ggt) compare
NOLOHH_17810 pykF -1.1 -1.8 pyruvate kinase PykF compare
NOLOHH_18545 -1.1 -3.6 phage minor tail protein G compare
NOLOHH_09610 zapG -1.1 -4.4 Z-ring associated protein ZapG compare
NOLOHH_14095 yfdV -1.1 -1.8 transporter YfdV compare
NOLOHH_15555 -1.1 -2.2 Type I toxin-antitoxin system Ibs family toxin compare
NOLOHH_22880 -1.1 -5.8 phage holin, lambda family compare
NOLOHH_04005 Leu_trna -1.1 -1.7 tRNA-Leu(caa) compare
NOLOHH_00615 quuD -1.1 -0.9 antitermination protein QuuD compare
NOLOHH_23265 ybgE -1.1 -3.1 cyd operon protein YbgE compare
NOLOHH_00445 -1.1 -2.4 peptidyl-arginine deiminase compare
NOLOHH_18315 rspB -1.1 -1.7 Zn-dependent oxidoreductase compare
NOLOHH_10555 glgS -1.0 -1.6 cell surface composition regulator GlgS compare
NOLOHH_00170 -1.0 -1.2 hypothetical protein compare
NOLOHH_14520 nuoN -1.0 -4.2 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_07550 rfaY -1.0 -2.8 lipopolysaccharide core heptose(II) kinase RfaY compare
NOLOHH_14500 nuoJ -1.0 -3.6 NADH-quinone oxidoreductase subunit J compare
NOLOHH_09955 deaD -1.0 -2.6 ATP-dependent RNA helicase DeaD compare
NOLOHH_20250 ymiC -1.0 -1.5 Protein YmiC compare
NOLOHH_14300 usg -1.0 -3.4 aspartate-semialdehyde dehydrogenase compare
NOLOHH_00360 -1.0 -5.7 relaxase/mobilization nuclease compare
NOLOHH_23235 pal -1.0 -3.2 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_05230 plsB -1.0 -1.2 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
NOLOHH_18225 ydgU -1.0 -2.4 Uncharacterized protein YdgU compare
NOLOHH_06540 uvrD -1.0 -7.0 DNA helicase II compare
NOLOHH_14480 nuoF -1.0 -4.5 NADH-quinone oxidoreductase subunit NuoF compare
NOLOHH_14490 nuoH -1.0 -4.1 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_09725 rapZ -1.0 -4.1 RNase adapter RapZ compare
NOLOHH_12545 recA -1.0 -2.3 recombinase RecA compare
NOLOHH_20185 rnb -0.9 -1.9 exoribonuclease II compare
NOLOHH_14460 nuoA -0.9 -2.4 NADH-quinone oxidoreductase subunit NuoA compare
NOLOHH_14485 nuoG -0.9 -4.7 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_17270 yeaC -0.9 -1.8 Uncharacterized protein YeaC compare
NOLOHH_19215 ydcY -0.9 -1.1 Uncharacterized protein YdcY compare
NOLOHH_08720 glpD -0.9 -4.8 glycerol-3-phosphate dehydrogenase compare
NOLOHH_20070 ycjM -0.9 -1.7 glucosylglycerate phosphorylase compare
NOLOHH_11490 fldB -0.9 -4.2 flavodoxin FldB compare
NOLOHH_18060 rsxD -0.9 -2.8 electron transport complex subunit RsxD compare
NOLOHH_04165 treC -0.9 -3.4 alpha,alpha-phosphotrehalase compare
NOLOHH_11425 ubiI -0.9 -1.2 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_10655 qseC -0.9 -5.0 two-component system sensor histidine kinase QseC compare
NOLOHH_23305 sucC -0.9 -4.0 ADP-forming succinate--CoA ligase subunit beta compare
NOLOHH_23245 tolA -0.9 -2.3 cell envelope integrity protein TolA compare
NOLOHH_23105 pgl -0.9 -4.0 6-phosphogluconolactonase compare
NOLOHH_14780 apbE -0.9 -2.1 FAD:protein FMN transferase ApbE compare
NOLOHH_01255 lon_P403L -0.9 -4.0 Lon protease compare
NOLOHH_08145 bcsZ -0.9 -5.7 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_14450 lrhA -0.9 -6.2 transcriptional regulator LrhA compare
NOLOHH_06590 cyaA -0.9 -5.1 class I adenylate cyclase compare
NOLOHH_18720 marA -0.9 -1.0 MDR efflux pump AcrAB transcriptional activator MarA compare
NOLOHH_14470 nuoC -0.9 -3.7 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_20945 potC -0.9 -3.4 spermidine/putrescine ABC transporter permease PotC compare
NOLOHH_04760 ghoS -0.9 -2.1 type V toxin-antitoxin system endoribonuclease antitoxin GhoS compare
NOLOHH_23240 tolB -0.9 -4.5 Tol-Pal system protein TolB compare
NOLOHH_11415 pepP -0.8 -3.7 Xaa-Pro aminopeptidase compare
NOLOHH_20865 bluF -0.8 -1.3 blue light-responsive regulator BluF compare
NOLOHH_18915 yddB -0.8 -1.2 Uncharacterized protein YddB compare
NOLOHH_00790 fimA -0.8 -1.4 type 1 fimbrial major subunit FimA compare
NOLOHH_20455 hns -0.8 -2.7 DNA-binding transcriptional regulator H-NS compare
NOLOHH_17440 astE -0.8 -1.3 succinylglutamate desuccinylase compare
NOLOHH_00705 gam -0.8 -1.5 Host-nuclease inhibitor protein gam compare
NOLOHH_11245 -0.8 -1.0 Putative oxidoreductase compare
NOLOHH_16355 yedK -0.8 -1.0 Abasic site processing protein YedK compare
NOLOHH_07020 pstA -0.8 -2.4 phosphate ABC transporter permease PstA compare
NOLOHH_09835 obgE -0.8 -1.0 GTPase ObgE compare
NOLOHH_20255 yciX -0.8 -1.3 YmiA family putative membrane protein compare
NOLOHH_17390 ynjB -0.8 -1.4 ABC transporter substrate-binding protein compare
NOLOHH_15245 yehR -0.8 -2.6 Uncharacterized lipoprotein YehR compare
NOLOHH_22890 Asn_trna -0.8 -1.2 tRNA-Asn(gtt) compare
NOLOHH_05695 sthA -0.8 -3.9 Si-specific NAD(P)(+) transhydrogenase compare
NOLOHH_13365 rodZ -0.8 -2.8 cytoskeleton protein RodZ compare
NOLOHH_14510 nuoL -0.8 -4.2 NADH-quinone oxidoreductase subunit L compare
NOLOHH_21735 yccX -0.8 -1.6 acylphosphatase compare
NOLOHH_06755 ppiC -0.8 -1.4 peptidylprolyl isomerase PpiC compare
NOLOHH_23320 sdhB -0.8 -3.0 succinate dehydrogenase iron-sulfur subunit SdhB compare
NOLOHH_24495 -0.8 -0.7 lngG compare
NOLOHH_08825 ompR_G63V -0.8 -4.3 two-component system response regulator OmpR conserved
NOLOHH_04420 ulaR -0.8 -4.3 HTH-type transcriptional regulator UlaR compare
NOLOHH_24290 ssb -0.8 -2.1 single-stranded DNA-binding protein compare
NOLOHH_10800 hybD -0.8 -3.0 HyaD/HybD family hydrogenase maturation endopeptidase compare
NOLOHH_22860 -0.8 -2.9 terminase small subunit compare
NOLOHH_13185 glyA -0.8 -3.3 serine hydroxymethyltransferase compare
NOLOHH_00315 -0.8 -3.3 Cnjugal protein Pilx7 compare
NOLOHH_04350 tnpA -0.8 -2.4 IS200/IS605-like element IS609 family transposase compare
NOLOHH_11230 tkt -0.7 -1.4 transketolase compare
NOLOHH_01535 proC -0.7 -3.6 pyrroline-5-carboxylate reductase compare
NOLOHH_06385 fre -0.7 -4.7 NAD(P)H-flavin reductase compare
NOLOHH_20465 rssB -0.7 -2.0 two-component system response regulator RssB compare
NOLOHH_07015 pstC -0.7 -2.3 phosphate ABC transporter permease PstC compare
NOLOHH_06115 -0.7 -2.4 transcriptional regulator compare
NOLOHH_06415 tatA -0.7 -0.9 Sec-independent protein translocase subunit TatA compare
NOLOHH_22650 cecR -0.7 -2.2 DNA-binding transcriptional regulator CecR compare
NOLOHH_19305 tehA -0.7 -1.4 dicarboxylate transporter/tellurite-resistance protein TehA compare
NOLOHH_13990 ypeD -0.7 -1.1 Protein YpeD compare
NOLOHH_24680 traX -0.7 -2.0 conjugal transfer pilus acetylase TraX compare
NOLOHH_05225 dgkA -0.7 -2.1 diacylglycerol kinase compare
NOLOHH_11940 recD -0.7 -2.9 exodeoxyribonuclease V subunit alpha compare
NOLOHH_17880 mdtK -0.7 -1.9 multidrug efflux MATE transporter MdtK compare
NOLOHH_13015 grcA -0.7 -1.8 autonomous glycyl radical cofactor GrcA compare
NOLOHH_24335 -0.7 -1.6 YdeA protein compare
NOLOHH_13175 glnB -0.7 -2.2 nitrogen regulatory protein P-II compare
NOLOHH_05965 pfkA -0.7 -2.8 6-phosphofructokinase compare
NOLOHH_11145 gshB -0.7 -4.1 glutathione synthase compare
NOLOHH_18965 ddpB -0.7 -1.3 putative D,D-dipeptide transport system permease protein DdpB compare
NOLOHH_22285 artQ -0.7 -1.3 arginine ABC transporter permease ArtQ compare
NOLOHH_13700 eutQ -0.7 -2.2 ethanolamine utilization acetate kinase EutQ compare
NOLOHH_00780 -0.7 -1.7 Usher protein compare
NOLOHH_20830 -0.7 -1.9 Autotransporter domain-containing protein compare
NOLOHH_17840 ydhU -0.7 -1.6 Putative cytochrome YdhU compare
NOLOHH_09940 pnp -0.7 -4.6 polyribonucleotide nucleotidyltransferase compare
NOLOHH_17680 ydiS -0.7 -1.8 putative electron transfer flavoprotein-quinone oxidoreductase YdiS compare
NOLOHH_14465 nuoB -0.7 -3.2 NADH-quinone oxidoreductase subunit NuoB compare
NOLOHH_16275 dsrB -0.7 -1.3 protein DsrB compare
NOLOHH_19385 ydcF -0.7 -0.8 Protein YdcF compare
NOLOHH_22935 ninB -0.7 -2.9 Protein ninB compare
NOLOHH_08515 ftsX -0.6 -2.2 permease-like cell division protein FtsX compare
NOLOHH_22975 -0.6 -2.7 hypothetical protein compare
NOLOHH_02175 yncI -0.6 -1.2 ISAs1 family transposase compare
NOLOHH_18885 ydeP -0.6 -1.3 acid resistance putative oxidoreductase YdeP compare
NOLOHH_21890 ssuE -0.6 -1.0 NADPH-dependent FMN reductase compare
NOLOHH_22835 -0.6 -1.8 hypothetical protein compare
NOLOHH_06300 dsbA -0.6 -1.7 thiol:disulfide interchange protein DsbA compare
NOLOHH_03300 fkpB -0.6 -0.9 FKBP-type peptidyl-prolyl cis-trans isomerase compare
NOLOHH_14160 Arg_trna -0.6 -1.5 tRNA-Arg(cct) compare
NOLOHH_05335 pgi -0.6 -4.4 glucose-6-phosphate isomerase compare
NOLOHH_22820 -0.6 -2.4 Phage-tail-NK domain-containing protein compare
NOLOHH_06395 rfaH -0.6 -3.3 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_20785 ycgL -0.6 -1.1 Protein YcgL compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms