Experiment set8S141 for Escherichia coli BL21

Compare to:

K25

200 most detrimental genes:

  gene name fitness t score description  
ECD_01277 +1.8 3.5 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase compare
ECD_02310 +1.2 2.6 DUF3820 family protein compare
ECD_01565 +1.1 2.5 putative arabinose efflux transporter compare
ECD_01042 +1.0 2.1 O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit compare
ECD_01290 +0.9 2.6 putative Zn-dependent NAD(P)-binding oxidoreductase compare
ECD_01954 +0.9 1.1 phosphomannomutase compare
ECD_01258 +0.8 2.1 orotidine-5'-phosphate decarboxylase compare
ECD_01235 +0.8 2.1 tryptophan synthase, beta subunit compare
ECD_02101 +0.8 2.2 elongation factor P-like protein compare
ECD_02238 +0.7 1.5 colicin V production protein compare
ECD_01601 +0.7 1.0 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex compare
ECD_02131 +0.7 2.4 ferredoxin-type protein compare
ECD_03132 +0.7 1.6 dehydroshikimate reductase, NAD(P)-binding compare
ECD_00695 +0.7 1.4 putative inner membrane protein in cydABX-ybgE operon compare
ECD_00938 +0.7 2.0 aliphatic sulfonate ABC transporter permease compare
ECD_01625 +0.7 2.0 murein DD-endopeptidase, space-maker hydrolase compare
ECD_03324 +0.7 2.3 4'-phosphopantetheinyl transferase compare
ECD_03122 +0.7 1.3 acrAB operon transcriptional repressor compare
ECD_01979 +0.7 1.5 multidrug efflux system, subunit A compare
ECD_02584 +0.7 1.5 serine/threonine-specific protein phosphatase 2 compare
ECD_01779 +0.7 1.1 putative reactive intermediate deaminase compare
ECD_02820 +0.6 1.1 hypothetical protein compare
ECD_02671 +0.6 1.7 putative prepilin peptidase-dependent protein compare
ECD_01479 +0.6 1.3 putative membrane-bound diguanylate cyclase compare
ECD_00960 +0.6 1.5 Ter macrodomain organizer matS-binding protein compare
ECD_00983 +0.6 2.7 phosphoanhydride phosphorylase compare
ECD_00506 +0.6 1.6 DLP12 prophage; putative phage lysis protein compare
ECD_04235 +0.6 2.3 L-galactonate oxidoreductase; L-gulonate oxidoreductase compare
ECD_02477 +0.6 1.7 DTW domain protein compare
ECD_01604 +0.6 2.2 dipeptide and tripeptide permease A compare
ECD_01620 +0.6 1.8 chromate reductase, quinone reductase, FMN-linked; N-Ethylmaleimide reductase; old yellow enzyme compare
ECD_02792 +0.6 1.6 oxidative damage protective factor for iron-sulfur proteins compare
ECD_02322 +0.6 2.1 sulfate/thiosulfate transporter subunit compare
ECD_00185 +0.6 2.0 putative lyase compare
ECD_01737 +0.6 1.5 nicotinamidase/pyrazinamidase compare
ECD_01488 +0.6 1.3 putative phage protein compare
ECD_01198 +0.6 1.6 putative invasin compare
ECD_03022 +0.6 2.0 GIY-YIG nuclease superfamily protein compare
ECD_03977 +0.6 2.2 phosphonate ABC transporter ATPase compare
ECD_00946 +0.6 1.6 putative fimbriae protein compare
ECD_01869 +0.6 1.9 L-arabinose ABC transporter periplasmic binding protein compare
ECD_01441 +0.6 1.0 D,D-dipeptide ABC transporter ATPase compare
ECD_00082 +0.6 0.7 RsmH methytransferase inhibitor compare
ECD_02033 +0.6 1.7 hypothetical protein compare
ECD_02365 +0.6 1.2 palmitoyl-CoA esterase activity, uncertain physiological substrate compare
ECD_03096 +0.6 1.3 malate dehydrogenase, NAD(P)-binding compare
ECD_02090 +0.6 1.7 nucleoside permease compare
ECD_02424 +0.6 2.2 tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent compare
ECD_01772 +0.6 1.8 putative YeaWX dioxygenase alpha subunit; 2Fe-2S cluster compare
ECD_00554 +0.5 0.8 regulator of length of O-antigen component of lipopolysaccharide chains compare
ECD_01276 +0.5 2.3 repressor for the divergent puu operons, putrescine inducible compare
ECD_01237 +0.5 2.1 fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase compare
ECD_02300 +0.5 2.0 DUF2502 family putative periplasmic protein compare
ECD_01445 +0.5 1.3 D,D-dipeptide ABC transporter periplasmic binding protein compare
ECD_03429 +0.5 2.4 2,3-diketo-L-gulonate TRAP transporter small permease protein compare
ECD_02525 +0.5 1.3 DNA binding protein, nucleoid-associated compare
ECD_01584 +0.5 1.3 putative outer membrane porin for beta-glucuronides porin protein compare
ECD_02556 +0.5 2.2 sorbitol-responsive srl operon transcriptional activator compare
ECD_00353 +0.5 1.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
ECD_00802 +0.5 1.0 ribosomal protein S12 methylthiotransferase compare
ECD_02746 +0.5 1.2 hypothetical protein compare
ECD_01401 +0.5 0.7 gamma-aminobutyraldehyde dehydrogenase compare
ECD_01067 +0.5 1.0 anti-sigma factor for FliA (sigma 28) compare
ECD_00269 +0.5 1.0 choline-inducible betIBA-betT divergent operon transcriptional repressor compare
ECD_00205 +0.5 2.3 hydroxyacylglutathione hydrolase compare
ECD_02780 +0.5 2.4 putative PilT family AAA+ ATPase compare
ECD_00900 +0.5 1.4 dimethyl sulfoxide reductase, anaerobic, subunit C compare
ECD_01118 +0.5 1.3 deacetylase of acs and cheY, chemotaxis regulator compare
ECD_00434 +0.5 0.8 putative DNA-binding transcriptional regulator compare
ECD_02346 +0.5 1.3 aldehyde oxidoreductase, ethanolamine utilization protein compare
ECD_04212 +0.5 1.3 5-methylcytosine-specific restriction enzyme McrBC, subunit McrB compare
ECD_00977 +0.5 1.7 hydrogenase 1, b-type cytochrome subunit compare
ECD_02031 +0.5 1.6 hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase compare
ECD_03998 +0.5 1.2 GNAT family putative N-acetyltransferase compare
ECD_03963 +0.5 1.6 putative periplasmic protein compare
ECD_02655 +0.5 1.7 L-fucose mutarotase compare
ECD_00920 +0.5 1.7 DUF1006 family protein with C-terminal wHTH domain compare
ECD_03671 +0.5 1.0 TDP-Fuc4NAc:lipidIIFuc4NAc transferase compare
ECD_01559 +0.5 1.2 oxidoreductase, membrane subunit compare
ECD_00771 +0.5 1.7 Fe(II)-dependent oxygenase superfamily protein compare
ECD_00500 +0.5 0.9 DLP12 prophage; endonuclease RUS compare
ECD_01452 +0.5 1.2 putative periplasmic M16 family zinc metalloendopeptidase compare
ECD_02274 +0.5 2.6 dsd operon activator; autorepressor compare
ECD_00260 +0.5 1.3 reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide-dependent disulfide oxidoreductase family compare
ECD_00461 +0.5 1.6 putative allantoin transporter compare
ECD_03964 +0.5 1.8 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase compare
ECD_02348 +0.5 0.8 ethanolamine utilization protein, putative carboxysome structural protein compare
ECD_01443 +0.5 1.2 D,D-dipeptide ABC transporter permease compare
ECD_03907 +0.5 2.7 maltose ABC transporter ATPase compare
ECD_00230 +0.5 0.7 hypothetical protein compare
ECD_01215 +0.5 2.1 fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase compare
ECD_00195 +0.5 1.3 putative outer membrane protein compare
ECD_00102 +0.5 2.2 FtsZ stabilizer compare
ECD_02919 +0.4 1.3 motility and biofilm regulator compare
ECD_02091 +0.4 1.1 ribonucleoside hydrolase 2 compare
ECD_03610 +0.4 1.5 phosphate ABC transporter permease compare
ECD_01403 +0.4 0.8 DUF2526 family protein compare
ECD_02349 +0.4 1.4 phosphate acetyltransferase compare
ECD_01107 +0.4 0.8 repressor for bhsA(ycfR) compare
ECD_02382 +0.4 0.8 putative processing element hydrogenase 4 compare
ECD_01006 +0.4 1.0 uncharacterized protein compare
ECD_02853 +0.4 1.5 hypothetical protein compare
ECD_03359 +0.4 1.3 acid-resistance membrane protein compare
ECD_01966 +0.4 1.5 colanic acid production tyrosine-protein kinase; autokinase; Ugd phosphorylase compare
ECD_03357 +0.4 0.7 acid-resistance protein compare
ECD_01033 +0.4 0.7 DUF1097 family inner membrane protein compare
ECD_01425 +0.4 1.3 nitrate reductase 2 (NRZ), beta subunit compare
ECD_01529 +0.4 0.5 Qin prophage; uncharacterized protein compare
ECD_01773 +0.4 0.8 putative YeaWX dioxygenase beta subunit, reductase component compare
ECD_02109 +0.4 1.1 microcin C ABC transporter permease compare
ECD_00660 +0.4 1.4 conserved protein, rhs-like protein compare
ECD_01586 +0.4 0.8 beta-D-glucuronidase compare
ECD_01318 +0.4 1.5 diguanylate cyclase, csgD regulator compare
ECD_02774 +0.4 1.3 Zn-dependent metalloprotease-related protein compare
ECD_01982 +0.4 1.4 putative citrate/iron-citrate/zinc-citrate efflux transporter compare
ECD_01014 +0.4 1.2 ureidoacrylate amidohydrolase compare
ECD_04129 +0.4 2.1 DUF853 family protein with NTPase fold compare
ECD_00950 +0.4 0.8 FtsZ stabilizer compare
ECD_01785 +0.4 1.3 putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production compare
ECD_03867 +0.4 1.4 thiamine biosynthesis ThiGH complex subunit compare
ECD_03659 +0.4 0.6 thioredoxin 1 compare
ECD_01048 +0.4 0.9 multicopy suppressor of secY and secA compare
ECD_01795 +0.4 1.6 putative inner membrane protein compare
ECD_04269 +0.4 1.2 transcriptional repressor, tryptophan-binding compare
ECD_03180 +0.4 1.0 putative general secretory pathway component, cryptic compare
ECD_01093 +0.4 1.8 septation protein, ampicillin sensitivity compare
ECD_02162 +0.4 0.8 ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance compare
ECD_00877 +0.4 2.2 HCP oxidoreductase, NADH-dependent compare
ECD_01374 +0.4 1.5 cytochrome b561 compare
ECD_01079 +0.4 1.5 flagellar hook-filament junction protein compare
ECD_01478 +0.4 0.8 altronate oxidoreductase, NAD-dependent compare
ECD_01315 +0.4 1.0 p-aminobenzoyl-glutamate hydrolase, A subunit compare
ECD_00215 +0.4 2.3 inhibitor of c-type lysozyme, periplasmic compare
ECD_02305 +0.4 1.0 DUF1323 family putative DNA-binding protein compare
ECD_01829 +0.4 1.4 zinc ABC transporter ATPase compare
ECD_02128 +0.4 1.0 heme export ABC transporter ATPase compare
ECD_02333 +0.4 1.1 inner membrane protein compare
ECD_00332 +0.4 2.2 diguanylate cyclase, cellulose regualtor compare
ECD_01241 +0.4 0.9 putative RNA binding protein compare
ECD_00336 +0.4 1.9 OxyR-regulated conserved protein compare
ECD_00846 +0.4 0.7 hypothetical protein compare
ECD_03385 +0.4 2.3 DUF2636 family cellulose production small membrane protein compare
ECD_03181 +0.4 1.7 general secretory pathway component, cryptic compare
ECD_00849 +0.4 1.0 putative DNA-invertase compare
ECD_04086 +0.4 1.6 3'(2'),5'-bisphosphate nucleotidase compare
ECD_04245 +0.4 1.9 uncharacterized protein compare
ECD_02068 +0.4 1.7 putative outer membrane protein compare
ECD_01137 +0.4 1.0 repressor of blue light-responsive genes compare
ECD_03023 +0.4 1.2 GNAT family putative N-acetyltransferase compare
ECD_01044 +0.4 0.7 OPG biosynthetic transmembrane succinyltransferase compare
ECD_01138 +0.4 1.1 anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein compare
ECD_02136 +0.4 1.3 ecotin, a serine protease inhibitor compare
ECD_00399 +0.4 0.7 putative DNA-binding transcriptional regulator compare
ECD_03353 +0.4 0.9 hypothetical protein compare
ECD_02431 +0.4 0.6 3-phenylpropionate dioxygenase, small (beta) subunit compare
ECD_02416 +0.4 0.9 Fe(2+) donor and activity modulator for cysteine desulfurase compare
ECD_01986 +0.4 1.8 putative peptidase compare
ECD_00651 +0.4 0.9 response regulator in two-component regulatory system with KdpD compare
ECD_02834 +0.4 1.0 putative type II secretion protein GspH compare
ECD_01775 +0.4 0.6 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) compare
ECD_03846 +0.4 2.6 oxidative and nitrosative stress transcriptional regulator compare
ECD_03358 +0.4 0.6 stress response protein acid-resistance protein compare
ECD_00653 +0.4 0.9 potassium translocating ATPase, subunit C compare
ECD_00923 +0.4 1.3 protein kinase-like domain protein compare
ECD_04122 +0.4 1.6 GNAT family putative N-acetyltransferase compare
ECD_01400 +0.4 1.0 putative ABC transporter permease compare
ECD_04123 +0.4 1.0 DUF898 family inner membrane protein compare
ECD_02299 +0.4 1.8 putative ion channel protein compare
ECD_01426 +0.4 1.1 nitrate reductase 2 (NRZ), alpha subunit compare
ECD_00556 +0.4 0.7 iron-enterobactin ABC transporter permease compare
ECD_01695 +0.4 0.6 putative inner membrane protein compare
ECD_00338 +0.4 0.7 UPF0345 family protein compare
ECD_00378 +0.4 0.6 hypothetical protein compare
ECD_00616 +0.4 1.3 Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor compare
ECD_02229 +0.4 1.2 putative NAD-dependent nucleotide-sugar epimerase compare
ECD_03623 +0.4 0.8 ATP synthase, membrane-bound accessory factor compare
ECD_00596 +0.4 0.8 TatABCE protein translocation system subunit compare
ECD_01059 +0.4 0.9 lipoprotein, DUF1439 family compare
ECD_01810 +0.4 1.0 DUF2511 family protein compare
ECD_03207 +0.4 0.6 OsmC family protein compare
ECD_04062 +0.4 0.9 L-ascorbate-specific enzyme IIA component of PTS compare
ECD_02148 +0.4 1.1 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit compare
ECD_00655 +0.3 1.1 potassium translocating ATPase, subunit A compare
ECD_03352 +0.3 0.7 arsenate reductase compare
ECD_01694 +0.3 0.9 fructosamine kinase family protein compare
ECD_01977 +0.3 0.6 ser/thr phosphatase-related protein compare
ECD_01716 +0.3 0.5 arginine succinyltransferase compare
ECD_03220 +0.3 0.4 small lipoprotein compare
ECD_01404 +0.3 0.8 DUF606 family inner membrane protein compare
ECD_00126 +0.3 1.9 putative ABC transporter ATPase compare
ECD_00255 +0.3 1.1 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein compare
ECD_00021 +0.3 0.9 putative usher protein compare
ECD_04015 +0.3 1.6 uncharacterized protein compare
ECD_00328 +0.3 2.1 D-alanine-D-alanine ligase A compare
ECD_01770 +0.3 0.8 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase compare
ECD_04339 +0.3 1.0 stress-induced small enterobacterial protein compare
ECD_00684 +0.3 1.2 succinate dehydrogenase, FeS subunit compare
ECD_01782 +0.3 0.9 aminodeoxychorismate synthase, subunit I compare
ECD_02861 +0.3 1.4 putative ATP-binding protein compare
ECD_00742 +0.3 1.2 biotin synthase compare


Specific Phenotypes

None in this experiment

For Escherichia coli BL21 in phage experiments

For phage MOI 10 across organisms