Experiment set8S131 for Escherichia coli ECOR27

Compare to:

RB26

200 most important genes:

  gene name fitness t score description  
NOLOHH_15730 -5.8 -13.6 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_07565 rfaL -5.6 -10.1 O-antigen ligase RfaL compare
NOLOHH_06715 wecA -5.4 -23.9 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_23145 galE -5.1 -6.0 UDP-glucose 4-epimerase GalE compare
NOLOHH_06665 wzyE -5.1 -9.2 ECA oligosaccharide polymerase compare
NOLOHH_07555 rfaJ -5.0 -4.8 glucosyltransferase compare
NOLOHH_07560 rfaB -4.9 -9.4 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_23480 pgm -4.6 -5.4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_20460 galU -4.6 -3.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
NOLOHH_06675 wzxE -4.4 -7.4 lipid III flippase WzxE compare
NOLOHH_07535 rfaG -4.0 -9.5 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_07575 rfaF -3.9 -2.7 ADP-heptose--LPS heptosyltransferase RfaF compare
NOLOHH_07545 waaO -3.1 -3.8 lipopolysaccharide 3-alpha-galactosyltransferase compare
NOLOHH_13310 hscA -2.8 -4.1 Fe-S protein assembly chaperone HscA compare
NOLOHH_02845 aceE -2.8 -1.9 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
NOLOHH_06530 corA -2.7 -5.9 magnesium/cobalt transporter CorA compare
NOLOHH_06550 xerC -2.6 -3.7 tyrosine recombinase XerC compare
NOLOHH_05490 hupA -2.6 -1.9 DNA-binding protein HU-alpha compare
NOLOHH_24240 -2.6 -1.5 transglycosylase SLT domain-containing protein compare
NOLOHH_14340 ubiX -2.6 -3.4 flavin prenyltransferase UbiX compare
NOLOHH_11230 tkt -2.4 -2.6 transketolase compare
NOLOHH_00385 -2.4 -1.7 hypothetical protein compare
NOLOHH_05815 metL -2.4 -11.8 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_23315 sucA -2.4 -1.9 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_12545 recA -2.3 -4.3 recombinase RecA compare
NOLOHH_24675 finO -2.3 -6.6 Fertility inhibition protein compare
NOLOHH_11365 rpiA -2.2 -3.3 ribose-5-phosphate isomerase RpiA compare
NOLOHH_13055 rseA -2.2 -3.2 anti-sigma-E factor RseA compare
NOLOHH_06395 rfaH -2.1 -4.6 transcription/translation regulatory transformer protein RfaH compare
NOLOHH_06920 mnmG -2.0 -6.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
NOLOHH_09835 obgE -1.9 -1.9 GTPase ObgE compare
NOLOHH_23250 tolR -1.9 -4.3 colicin uptake protein TolR compare
NOLOHH_16845 zwf -1.9 -2.3 glucose-6-phosphate dehydrogenase compare
NOLOHH_01270 clpP -1.8 -3.6 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
NOLOHH_07540 rfaP -1.8 -5.0 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_17330 ydjA -1.7 -1.5 NAD(P)H nitroreductase compare
NOLOHH_09730 ptsN -1.7 -3.8 PTS IIA-like nitrogen regulatory protein PtsN compare
NOLOHH_16080 -1.7 -1.5 hypothetical protein compare
NOLOHH_05830 metJ -1.6 -2.3 met regulon transcriptional regulator MetJ compare
NOLOHH_20465 rssB -1.6 -2.9 two-component system response regulator RssB compare
NOLOHH_09695 arcB -1.6 -4.9 aerobic respiration two-component sensor histidine kinase ArcB compare
NOLOHH_10610 tolC -1.6 -3.0 outer membrane channel protein TolC compare
NOLOHH_18115 hdhA -1.5 -2.4 7-alpha-hydroxysteroid dehydrogenase compare
NOLOHH_13865 crr -1.5 -1.9 PTS glucose transporter subunit IIA compare
NOLOHH_23310 odhB -1.5 -1.6 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_24460 -1.5 -1.2 LngX2 compare
NOLOHH_07125 -1.5 -3.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
NOLOHH_08375 pitA -1.5 -5.8 inorganic phosphate transporter PitA compare
NOLOHH_23995 fes -1.5 -3.5 enterobactin/ferric enterobactin esterase compare
NOLOHH_19520 -1.5 -1.6 YnbE family lipoprotein compare
NOLOHH_14475 nuoE -1.5 -2.6 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_03170 surA -1.4 -3.9 peptidylprolyl isomerase SurA compare
NOLOHH_23510 fur -1.4 -2.0 ferric iron uptake transcriptional regulator compare
NOLOHH_03190 apaH -1.4 -5.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
NOLOHH_13035 srmB -1.4 -7.2 ATP-dependent RNA helicase SrmB compare
NOLOHH_11670 escR -1.4 -1.3 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
NOLOHH_13075 lepA -1.4 -3.4 translation elongation factor 4 compare
NOLOHH_19040 adhP -1.4 -3.3 alcohol dehydrogenase AdhP compare
NOLOHH_14500 nuoJ -1.4 -3.9 NADH-quinone oxidoreductase subunit J compare
NOLOHH_00535 fII -1.3 -2.1 Head-tail connector protein FII compare
NOLOHH_11425 ubiI -1.3 -1.9 FAD-dependent 2-octaprenylphenol hydroxylase compare
NOLOHH_08900 aroK -1.3 -1.5 shikimate kinase AroK compare
NOLOHH_21015 ycfJ -1.3 -2.2 Uncharacterized protein YcfJ compare
NOLOHH_20555 chaB -1.3 -2.0 putative cation transport regulator ChaB compare
NOLOHH_09590 argR -1.3 -3.6 transcriptional regulator ArgR compare
NOLOHH_23485 seqA -1.3 -2.0 replication initiation negative regulator SeqA compare
NOLOHH_00445 -1.3 -1.5 peptidyl-arginine deiminase compare
NOLOHH_09845 greA -1.3 -1.7 transcription elongation factor GreA compare
NOLOHH_17125 rnd -1.2 -2.0 ribonuclease D compare
NOLOHH_02510 skp -1.2 -1.9 molecular chaperone Skp compare
NOLOHH_18245 mlc -1.2 -1.9 DNA-binding transcriptional repressor Mlc compare
NOLOHH_21130 yceD -1.2 -2.9 23S rRNA accumulation protein YceD compare
NOLOHH_14305 truA -1.2 -5.0 tRNA pseudouridine(38-40) synthase TruA compare
NOLOHH_07550 rfaY -1.2 -2.5 lipopolysaccharide core heptose(II) kinase RfaY compare
NOLOHH_01245 ppiD -1.2 -2.1 peptidylprolyl isomerase compare
NOLOHH_24290 ssb -1.2 -2.6 single-stranded DNA-binding protein compare
NOLOHH_14780 apbE -1.2 -3.1 FAD:protein FMN transferase ApbE compare
NOLOHH_02690 dksA -1.1 -3.4 RNA polymerase-binding protein DksA compare
NOLOHH_24495 -1.1 -0.8 lngG compare
NOLOHH_22880 -1.1 -5.9 phage holin, lambda family compare
NOLOHH_04005 Leu_trna -1.1 -1.4 tRNA-Leu(caa) compare
NOLOHH_22435 dgcI -1.1 -1.5 putative diguanylate cyclase DgcI compare
NOLOHH_17810 pykF -1.1 -2.1 pyruvate kinase PykF compare
NOLOHH_24695 vapB -1.1 -1.7 toxin-antitoxin system antitoxin VapB compare
NOLOHH_09455 -1.1 -1.8 DUF2556 domain-containing protein compare
NOLOHH_18060 rsxD -1.1 -2.7 electron transport complex subunit RsxD compare
NOLOHH_16310 fliM -1.1 -1.2 flagellar motor switch protein FliM compare
NOLOHH_13300 iscA -1.0 -2.1 iron-sulfur cluster assembly protein IscA compare
NOLOHH_12700 stpA -1.0 -2.3 DNA-binding protein StpA compare
NOLOHH_16920 copD -1.0 -2.4 copper homeostasis membrane protein CopD compare
NOLOHH_01255 lon_P403L -1.0 -4.8 Lon protease compare
NOLOHH_15670 wcaF -1.0 -2.9 colanic acid biosynthesis acetyltransferase WcaF compare
NOLOHH_03300 fkpB -1.0 -1.4 FKBP-type peptidyl-prolyl cis-trans isomerase compare
NOLOHH_21185 flgF -1.0 -1.8 flagellar basal-body rod protein FlgF compare
NOLOHH_11490 fldB -1.0 -4.5 flavodoxin FldB compare
NOLOHH_07010 pstS -1.0 -5.2 phosphate ABC transporter substrate-binding protein PstS compare
NOLOHH_19750 -1.0 -2.3 antiterminator compare
NOLOHH_06540 uvrD -1.0 -7.8 DNA helicase II compare
NOLOHH_13415 guaA -1.0 -1.9 glutamine-hydrolyzing GMP synthase compare
NOLOHH_06385 fre -1.0 -6.2 NAD(P)H-flavin reductase compare
NOLOHH_15490 yegR -1.0 -1.3 Uncharacterized protein YegR compare
NOLOHH_23235 pal -1.0 -2.3 peptidoglycan-associated lipoprotein Pal compare
NOLOHH_05965 pfkA -0.9 -4.0 6-phosphofructokinase compare
NOLOHH_20845 pdeG -0.9 -0.9 putative cyclic di-GMP phosphodiesterase PdeG compare
NOLOHH_00180 -0.9 -2.3 Plasmid stability protein stbA compare
NOLOHH_16675 yecN -0.9 -1.6 Inner membrane protein YecN compare
NOLOHH_04505 hflC -0.9 -2.0 protease modulator HflC compare
NOLOHH_19295 ydcL -0.9 -3.1 Uncharacterized lipoprotein YdcL compare
NOLOHH_14470 nuoC -0.9 -3.3 NADH-quinone oxidoreductase subunit C/D compare
NOLOHH_24475 -0.9 -0.6 pilus assembly protein compare
NOLOHH_23240 tolB -0.9 -4.3 Tol-Pal system protein TolB compare
NOLOHH_00360 -0.9 -4.4 relaxase/mobilization nuclease compare
NOLOHH_20735 fadR -0.9 -1.7 fatty acid metabolism transcriptional regulator FadR compare
NOLOHH_00315 -0.9 -1.8 Cnjugal protein Pilx7 compare
NOLOHH_22870 -0.9 -3.7 lysis protein compare
NOLOHH_20410 oppC -0.9 -1.3 oligopeptide ABC transporter permease OppC compare
NOLOHH_13185 glyA -0.9 -3.4 serine hydroxymethyltransferase compare
NOLOHH_09610 zapG -0.9 -3.1 Z-ring associated protein ZapG compare
NOLOHH_13070 rseC -0.9 -2.6 SoxR-reducing system protein RseC compare
NOLOHH_12805 rnfH -0.9 -1.6 RnfH family protein compare
NOLOHH_01275 tig -0.9 -4.2 trigger factor compare
NOLOHH_22890 Asn_trna -0.9 -1.7 tRNA-Asn(gtt) compare
NOLOHH_23495 ybfE -0.9 -3.2 LexA regulated protein compare
NOLOHH_06590 cyaA -0.9 -5.3 class I adenylate cyclase compare
NOLOHH_19555 ompN -0.9 -2.2 porin OmpN compare
NOLOHH_07015 pstC -0.9 -2.8 phosphate ABC transporter permease PstC compare
NOLOHH_20745 dsbB -0.9 -2.3 disulfide bond formation protein DsbB compare
NOLOHH_19350 mokB -0.9 -1.7 IS3 family transposase compare
NOLOHH_18070 rsxB -0.9 -0.9 electron transport complex subunit RsxB compare
NOLOHH_14485 nuoG -0.8 -4.0 NADH-quinone oxidoreductase subunit NuoG compare
NOLOHH_21640 gfcB -0.8 -1.7 Uncharacterized lipoprotein GfcB compare
NOLOHH_18955 ddpX -0.8 -1.1 D-alanyl-D-alanine dipeptidase compare
NOLOHH_01535 proC -0.8 -4.1 pyrroline-5-carboxylate reductase compare
NOLOHH_09955 deaD -0.8 -2.6 ATP-dependent RNA helicase DeaD compare
NOLOHH_18305 ynfA -0.8 -0.7 YnfA family protein compare
NOLOHH_18050 rsxE -0.8 -1.4 electron transport complex subunit RsxE compare
NOLOHH_16985 yebQ -0.8 -1.9 Uncharacterized transporter YebQ compare
NOLOHH_07640 cysE -0.8 -1.0 serine O-acetyltransferase compare
NOLOHH_23035 -0.8 -2.3 DUF5405 domain-containing protein compare
NOLOHH_11495 xerD -0.8 -1.6 site-specific tyrosine recombinase XerD compare
NOLOHH_17950 -0.8 -1.9 Lactoylglutathione lyase compare
NOLOHH_21940 aspC -0.8 -1.6 aspartate transaminase compare
NOLOHH_19045 yddM -0.8 -1.8 HigA family addiction module antitoxin compare
NOLOHH_00515 -0.8 -2.4 Phage minor tail protein G compare
NOLOHH_16290 fliQ -0.8 -0.9 flagellar biosynthesis protein FliQ compare
NOLOHH_24235 -0.8 -0.8 conjugal transfer protein TraM compare
NOLOHH_07530 rfaQ -0.8 -4.7 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_01960 ykgR -0.8 -0.8 Uncharacterized membrane protein YkgR compare
NOLOHH_05825 metJ -0.8 -2.7 met regulon transcriptional regulator MetJ compare
NOLOHH_16650 torY -0.8 -2.4 Cytochrome c-type protein TorY compare
NOLOHH_17170 insQ -0.8 -1.0 Putative RNA-guided DNA endonuclease InsQ compare
NOLOHH_19330 ydcJ -0.8 -1.4 Uncharacterized protein YdcJ compare
NOLOHH_18240 ynfL -0.8 -1.3 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_20950 potD -0.8 -2.9 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
NOLOHH_14160 Arg_trna -0.8 -2.1 tRNA-Arg(cct) compare
NOLOHH_03030 cra -0.8 -3.3 catabolite repressor/activator compare
NOLOHH_13115 shoB -0.8 -0.9 Small toxic protein ShoB compare
NOLOHH_07630 secB -0.8 -1.2 protein-export chaperone SecB compare
NOLOHH_14760 rcsB -0.8 -1.8 transcriptional regulator RcsB compare
NOLOHH_17565 yniD -0.7 -0.7 Uncharacterized protein YniD compare
NOLOHH_10655 qseC -0.7 -4.2 two-component system sensor histidine kinase QseC compare
NOLOHH_24815 trbG -0.7 -0.7 conjugal transfer protein TrbG compare
NOLOHH_04165 treC -0.7 -2.8 alpha,alpha-phosphotrehalase compare
NOLOHH_06730 trxA -0.7 -2.0 thioredoxin TrxA compare
NOLOHH_21735 yccX -0.7 -1.2 acylphosphatase compare
NOLOHH_09940 pnp -0.7 -4.9 polyribonucleotide nucleotidyltransferase compare
NOLOHH_22875 -0.7 -2.9 Endolysin compare
NOLOHH_17440 astE -0.7 -1.1 succinylglutamate desuccinylase compare
NOLOHH_23045 -0.7 -1.6 hypothetical protein compare
NOLOHH_08145 bcsZ -0.7 -4.5 cellulose synthase complex periplasmic endoglucanase BcsZ compare
NOLOHH_18855 fimA -0.7 -0.7 type 1 fimbrial major subunit FimA compare
NOLOHH_14300 usg -0.7 -2.4 aspartate-semialdehyde dehydrogenase compare
NOLOHH_00560 -0.7 -1.3 phage portal protein compare
NOLOHH_09905 nusA -0.7 -2.4 Transcription termination/antitermination protein NusA compare
NOLOHH_12925 rluD -0.7 -4.5 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
NOLOHH_00520 -0.7 -2.7 Tail tube protein compare
NOLOHH_22830 -0.7 -4.9 packaged DNA stabilization protein p27 compare
NOLOHH_11650 Gly_trna -0.7 -0.8 tRNA-Gly(ccc) compare
NOLOHH_03025 mraZ -0.7 -2.4 division/cell wall cluster transcriptional repressor MraZ compare
NOLOHH_18810 lsrD -0.7 -1.9 autoinducer 2 ABC transporter permease LsrD compare
NOLOHH_09725 rapZ -0.7 -3.2 RNase adapter RapZ compare
NOLOHH_00150 -0.7 -1.6 hypothetical protein compare
NOLOHH_11145 gshB -0.7 -3.9 glutathione synthase compare
NOLOHH_11415 pepP -0.7 -3.6 Xaa-Pro aminopeptidase compare
NOLOHH_00055 mazF -0.7 -1.2 endoribonuclease MazF compare
NOLOHH_14520 nuoN -0.7 -2.6 NADH-quinone oxidoreductase subunit NuoN compare
NOLOHH_24635 repL -0.7 -1.0 Positive regulator of RepFIC repA1 expression compare
NOLOHH_20070 ycjM -0.7 -1.7 glucosylglycerate phosphorylase compare
NOLOHH_12880 yfiR -0.7 -2.9 Protein YfiR compare
NOLOHH_04490 nsrR -0.7 -4.3 nitric oxide-sensing transcriptional repressor NsrR compare
NOLOHH_17455 cho -0.7 -2.1 excinuclease Cho compare
NOLOHH_21210 flgA -0.7 -1.2 flagellar basal body P-ring formation protein FlgA compare
NOLOHH_03600 prfC -0.7 -4.9 peptide chain release factor 3 compare
NOLOHH_10120 agaR -0.7 -3.6 aga operon transcriptional regulator AgaR compare
NOLOHH_20895 nudJ -0.7 -0.7 phosphatase NudJ compare
NOLOHH_00600 rrrD -0.7 -2.0 lysozyme RrrD compare
NOLOHH_08720 glpD -0.7 -3.0 glycerol-3-phosphate dehydrogenase compare
NOLOHH_23300 sucD -0.7 -2.9 succinate--CoA ligase subunit alpha compare
NOLOHH_24215 traA -0.7 -0.6 type IV conjugative transfer system pilin TraA compare
NOLOHH_01100 apt -0.7 -3.0 adenine phosphoribosyltransferase compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECOR27 in phage experiments

For phage Phage across organisms