| | gene | name | fitness | t score | description | |
|---|
| b0407 | yajC | -3.6 | -3.5 | preprotein translocase subunit YajC (NCBI) | compare |
| b4174 | hflK | -3.4 | -9.5 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b4175 | hflC | -3.4 | -9.1 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b0113 | pdhR | -2.8 | -4.8 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1493 | gadB | -2.6 | -1.4 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1346 | ydaQ | -2.5 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1292 | sapC | -2.4 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3912 | cpxR | -2.4 | -8.7 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b1175 | minD | -2.3 | -4.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1882 | cheY | -2.2 | -1.2 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1861 | ruvA | -2.1 | -1.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2258 | b2258 | -2.1 | -2.0 | putative transport/receptor protein (VIMSS) | compare |
| b1575 | dicB | -2.1 | -2.2 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0142 | folK | -2.0 | -1.1 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1176 | minC | -2.0 | -3.6 | septum formation inhibitor (NCBI) | compare |
| b1290 | sapF | -2.0 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4685 | yrbN | -2.0 | -2.3 | expressed protein (RefSeq) | compare |
| b2796 | sdaC | -2.0 | -12.4 | predicted serine transporter (NCBI) | compare |
| b2501 | ppk | -1.9 | -8.1 | polyphosphate kinase (NCBI) | compare |
| b1293 | sapB | -1.8 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1860 | ruvB | -1.8 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b4163 | glyV | -1.8 | -1.7 | tRNA-Gly (NCBI) | compare |
| b3931 | hslU | -1.8 | -9.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b4701 | sokX | -1.8 | -1.1 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0738 | tolR | -1.7 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3932 | hslV | -1.6 | -8.9 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1863 | ruvC | -1.6 | -2.0 | Holliday junction resolvase (NCBI) | compare |
| b0441 | ppiD | -1.6 | -9.6 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b4529 | ydbJ | -1.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b1291 | sapD | -1.6 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3781 | trxA | -1.6 | -3.1 | thioredoxin 1 (VIMSS) | compare |
| b2830 | nudH | -1.5 | -1.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4676 | yoaK | -1.5 | -1.0 | expressed protein (RefSeq) | compare |
| b2259 | pmrD | -1.5 | -1.4 | polymyxin resistance protein B (VIMSS) | compare |
| b3204 | ptsN | -1.5 | -4.2 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b4171 | miaA | -1.5 | -2.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0737 | tolQ | -1.5 | -1.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3035 | tolC | -1.4 | -6.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3229 | sspA | -1.4 | -1.8 | stringent starvation protein A (NCBI) | compare |
| b2156 | lysP | -1.4 | -7.7 | lysine transporter (NCBI) | compare |
| b3726 | pstA | -1.3 | -3.5 | phosphate transporter subunit (NCBI) | compare |
| b0989 | cspH | -1.3 | -2.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b4503 | yafF | -1.3 | -0.8 | no description | compare |
| b1514 | lsrC | -1.3 | -2.1 | AI2 transporter (NCBI) | compare |
| b0049 | apaH | -1.3 | -1.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b3792 | wzxE | -1.3 | -4.6 | O-antigen translocase (NCBI) | compare |
| b2569 | lepA | -1.3 | -2.5 | GTP-binding protein LepA (NCBI) | compare |
| b3611 | yibN | -1.3 | -3.9 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b0741 | pal | -1.2 | -2.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3390 | aroK | -1.2 | -1.5 | shikimate kinase I (NCBI) | compare |
| b3961 | oxyR | -1.2 | -7.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3617 | kbl | -1.2 | -5.3 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2168 | fruK | -1.2 | -1.6 | 1-phosphofructokinase (NCBI) | compare |
| b1482 | osmC | -1.2 | -2.0 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0053 | surA | -1.2 | -3.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3849 | trkH | -1.2 | -6.9 | potassium transporter (NCBI) | compare |
| b3649 | rpoZ | -1.2 | -2.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b1348 | lar | -1.2 | -1.7 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1671 | ydhX | -1.1 | -2.5 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b3613 | yibP | -1.1 | -1.1 | putative membrane protein (VIMSS) | compare |
| b3619 | rfaD | -1.1 | -2.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3466 | yhhL | -1.1 | -3.2 | conserved inner membrane protein (NCBI) | compare |
| b3962 | udhA | -1.1 | -4.1 | putative oxidoreductase (VIMSS) | compare |
| b2952 | yggT | -1.1 | -3.6 | predicted inner membrane protein (NCBI) | compare |
| b1642 | slyA | -1.1 | -1.1 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0439 | lon | -1.1 | -3.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3026 | qseC | -1.0 | -2.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3162 | deaD | -1.0 | -2.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3973 | birA | -1.0 | -2.3 | biotin--protein ligase (NCBI) | compare |
| b2518 | ndk | -1.0 | -1.6 | nucleoside diphosphate kinase (NCBI) | compare |
| b3052 | rfaE | -1.0 | -3.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4481 | rffT | -1.0 | -4.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1506 | yneL | -1.0 | -1.2 | predicted transcriptional regulator (NCBI) | compare |
| b4598 | yncL | -1.0 | -2.1 | hypothetical protein (RefSeq) | compare |
| b0222 | lpcA | -1.0 | -1.9 | phosphoheptose isomerase (NCBI) | compare |
| b4557 | yidD | -1.0 | -2.6 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | -1.0 | -2.0 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -1.0 | -2.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1531 | marA | -1.0 | -3.0 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b3621 | rfaC | -1.0 | -3.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1418 | cybB | -1.0 | -1.7 | cytochrome b(561) (VIMSS) | compare |
| b1739 | osmE | -1.0 | -2.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b0970 | yccA | -1.0 | -2.3 | inner membrane protein (NCBI) | compare |
| b3405 | ompR | -1.0 | -4.2 | osmolarity response regulator (NCBI) | compare |
| b2924 | mscS | -1.0 | -6.2 | mechanosensitive channel (NCBI) | compare |
| b4702 | mgtL | -1.0 | -1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3791 | rffA | -1.0 | -4.7 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3636 | rpmG | -0.9 | -1.2 | 50S ribosomal protein L33 (NCBI) | compare |
| b1380 | ldhA | -0.9 | -1.5 | D-lactate dehydrogenase (NCBI) | compare |
| b4640 | yoeG | -0.9 | -1.2 | no description | compare |
| b2506 | yfgI | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| b1164 | ycgZ | -0.9 | -0.9 | hypothetical protein (NCBI) | compare |
| b1550 | b1550 | -0.9 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2318 | truA | -0.9 | -1.8 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3977 | tyrU | -0.9 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b3933 | ftsN | -0.9 | -5.1 | essential cell division protein (NCBI) | compare |
| b1505 | ydeT | -0.9 | -0.8 | hypothetical protein (RefSeq) | compare |
| b2340 | sixA | -0.9 | -2.7 | phosphohistidine phosphatase (NCBI) | compare |
| b2479 | gcvR | -0.9 | -2.9 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1536 | ydeI | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b4202 | rpsR | -0.9 | -0.9 | 30S ribosomal protein S18 (NCBI) | compare |
| b0888 | trxB | -0.9 | -1.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2350 | yfdG | -0.9 | -4.0 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b2181 | yejG | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| b2895 | fldB | -0.9 | -1.8 | flavodoxin 2 (NCBI) | compare |
| b1579 | intQ | -0.9 | -1.2 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b0623 | cspE | -0.9 | -1.3 | cold shock protein E (NCBI) | compare |
| b0722 | sdhD | -0.9 | -2.9 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0436 | tig | -0.9 | -4.0 | trigger factor (NCBI) | compare |
| b0082 | mraW | -0.9 | -1.9 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1048 | mdoG | -0.9 | -3.1 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3387 | dam | -0.9 | -5.4 | DNA adenine methylase (NCBI) | compare |
| b1198 | dhaM | -0.9 | -3.4 | fused predicted dihydroxyacetone-specific PTS enzymes: HPr component/EI component (RefSeq) | compare |
| b1103 | ycfF | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3616 | tdh | -0.9 | -3.1 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b0502 | ylbG | -0.9 | -2.0 | no description | compare |
| b3778 | rep | -0.8 | -3.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3498 | prlC | -0.8 | -5.8 | oligopeptidase A (NCBI) | compare |
| b0605 | ahpC | -0.8 | -2.4 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1105 | ycfM | -0.8 | -2.5 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2576 | srmB | -0.8 | -1.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b1907 | tyrP | -0.8 | -2.9 | tyrosine transporter (NCBI) | compare |
| b3839 | tatC | -0.8 | -3.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1485 | ddpC | -0.8 | -2.2 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1730 | ydjO | -0.8 | -0.5 | predicted protein (RefSeq) | compare |
| b1823 | cspC | -0.8 | -1.5 | stress protein, member of the CspA-family (NCBI) | compare |
| b1951 | rcsA | -0.8 | -0.5 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1196 | ycgY | -0.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b4431 | rprA | -0.8 | -1.4 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b1161 | ycgX | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b3183 | obgE | -0.8 | -0.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4570 | lomR | -0.8 | -1.4 | no description | compare |
| b0406 | tgt | -0.8 | -3.6 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1765 | ydjA | -0.8 | -0.9 | predicted oxidoreductase (NCBI) | compare |
| b1147 | ymfL | -0.8 | -1.6 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2198 | ccmD | -0.8 | -1.7 | cytochrome c biogenesis protein (NCBI) | compare |
| b1502 | ydeQ | -0.8 | -0.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1249 | cls | -0.8 | -3.4 | cardiolipin synthetase (NCBI) | compare |
| b4203 | rplI | -0.8 | -2.3 | 50S ribosomal protein L9 (NCBI) | compare |
| b2620 | smpB | -0.8 | -0.5 | SsrA-binding protein (NCBI) | compare |
| b0564 | appY | -0.8 | -0.6 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1231 | tyrT | -0.8 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b1344 | ydaO | -0.8 | -1.7 | predicted C32 tRNA thiolase (NCBI) | compare |
| b1762 | b1762 | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3790 | rffC | -0.8 | -2.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1049 | mdoH | -0.8 | -4.2 | glucosyltransferase MdoH (NCBI) | compare |
| b1258 | yciF | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b1576 | ydfD | -0.8 | -0.4 | Qin prophage; predicted protein (NCBI) | compare |
| b4436 | ryeC | -0.8 | -1.1 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b2375 | yfdX | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b4179 | vacB | -0.8 | -2.5 | putative enzyme (VIMSS) | compare |
| b2314 | dedD | -0.7 | -2.1 | putative lipoprotein (VIMSS) | compare |
| b1600 | mdtJ | -0.7 | -0.8 | multidrug efflux system transporter (NCBI) | compare |
| b3728 | pstS | -0.7 | -1.0 | phosphate transporter subunit (NCBI) | compare |
| b1773 | ydjI | -0.7 | -0.8 | predicted aldolase (NCBI) | compare |
| b1707 | ydiV | -0.7 | -1.6 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -0.7 | -1.7 | transcription elongation factor NusA (NCBI) | compare |
| b0122 | yacC | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1503 | ydeR | -0.7 | -1.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3446 | yrhB | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b2111 | yehD | -0.7 | -1.4 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0013 | yaaI | -0.7 | -2.8 | hypothetical protein (NCBI) | compare |
| b4151 | frdD | -0.7 | -1.9 | fumarate reductase subunit D (NCBI) | compare |
| b3500 | gor | -0.7 | -1.0 | glutathione reductase (NCBI) | compare |
| b1594 | dgsA | -0.7 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1130 | phoP | -0.7 | -0.5 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1648 | b1648 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | -0.7 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3545 | proK | -0.7 | -1.1 | tRNA-Pro (NCBI) | compare |
| b2037 | rfbX | -0.7 | -3.3 | predicted polisoprenol-linked O-antigen transporter (NCBI) | compare |
| b1690 | ydiM | -0.7 | -0.8 | predicted transporter (NCBI) | compare |
| b3794 | rffM | -0.7 | -3.5 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b2809 | b2809 | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2504 | yfgG | -0.7 | -0.4 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b1877 | yecT | -0.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2330 | yfcB | -0.7 | -0.7 | putative adenine-specific methylase (VIMSS) | compare |
| b1129 | phoQ | -0.7 | -0.4 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0535 | fimZ | -0.7 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2531 | iscR | -0.7 | -0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0740 | tolB | -0.7 | -1.6 | translocation protein TolB precursor (NCBI) | compare |
| b0890 | ftsK | -0.7 | -1.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4313 | fimE | -0.7 | -3.3 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b1634 | tppB | -0.7 | -2.2 | putative tripeptide transporter permease (NCBI) | compare |
| b2189 | proL | -0.7 | -1.1 | tRNA-Pro (NCBI) | compare |
| b1524 | yneH | -0.7 | -0.7 | predicted glutaminase (NCBI) | compare |
| b1040 | csgD | -0.7 | -0.7 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1042 | csgA | -0.7 | -3.6 | cryptic curlin major subunit (NCBI) | compare |
| b0481 | ybaK | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b1168 | b1168 | -0.7 | -1.5 | putative proteases (VIMSS) | compare |
| b0297 | eaeH | -0.7 | -2.4 | attaching and effacing protein, pathogenesis factor (RefSeq) | compare |
| b1255 | yciC | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b1182 | hlyE | -0.7 | -0.4 | hemolysin E (VIMSS) | compare |
| b1165 | ymgA | -0.7 | -0.4 | hypothetical protein (NCBI) | compare |
| b0706 | ybfD | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b4497 | yeeL | -0.7 | -0.4 | no description | compare |
| b0630 | lipB | -0.6 | -0.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1084 | rne | -0.6 | -2.2 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3134 | agaW | -0.6 | -1.9 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b4045 | yjbJ | -0.6 | -1.4 | predicted stress response protein (NCBI) | compare |
| b4561 | insM | -0.6 | -2.2 | transposase (RefSeq) | compare |